RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 SMAD2Q15796 467 aaKnown RBP-0.56□□□□□ -2.5
RNU4-88P-201ENST00000411220 ABHD17BQ5VST6 288 aa-0.56□□□□□ -2.5
RNU4-88P-201ENST00000411220 FCRLBQ6BAA4 426 aa-0.56□□□□□ -2.5
RNU4-88P-201ENST00000411220 SLC2A7Q6PXP3 512 aa-0.56□□□□□ -2.5
RNU4-88P-201ENST00000411220 HTR3DQ70Z44 454 aa-0.56□□□□□ -2.5
RNU4-88P-201ENST00000411220 MRPL10Q7Z7H8 261 aaKnown RBP-0.56□□□□□ -2.5
RNU4-88P-201ENST00000411220 AEBP1Q8IUX7 1158 aa-0.56□□□□□ -2.5
RNU4-88P-201ENST00000411220 MRPL41Q8IXM3 137 aaKnown RBP-0.56□□□□□ -2.5
RNU4-88P-201ENST00000411220 SARAFQ96BY9 339 aa-0.56□□□□□ -2.5
RNU4-88P-201ENST00000411220 CYYR1Q96J86 154 aa-0.56□□□□□ -2.5
RNU4-88P-201ENST00000411220 MNTQ99583 582 aa-0.56□□□□□ -2.5
RNU4-88P-201ENST00000411220 EGFL8Q99944 293 aa-0.56□□□□□ -2.5
RNU4-88P-201ENST00000411220 ASH2LQ9UBL3 628 aa-0.56□□□□□ -2.5
RNU4-88P-201ENST00000411220 AMOTL2Q9Y2J4 779 aa-0.56□□□□□ -2.5
RNU4-88P-201ENST00000411220 EPPK1P58107 5090 aaKnown RBP-0.56□□□□□ -2.5
RNU4-88P-201ENST00000411220 IGKV3D-15A0A087WSY6 115 aa-0.57□□□□□ -2.5
RNU4-88P-201ENST00000411220 PRR23AA6NEV1 266 aa-0.57□□□□□ -2.5
RNU4-88P-201ENST00000411220 LDB3O75112 727 aa-0.57□□□□□ -2.5
RNU4-88P-201ENST00000411220 LGR5O75473 907 aa-0.57□□□□□ -2.5
RNU4-88P-201ENST00000411220 KNG1P01042 644 aa-0.57□□□□□ -2.5
RNU4-88P-201ENST00000411220 GPD1P21695 349 aa-0.57□□□□□ -2.5
RNU4-88P-201ENST00000411220 CERS1P27544 350 aa-0.57□□□□□ -2.5
RNU4-88P-201ENST00000411220 BCL6P41182 706 aa-0.57□□□□□ -2.5
RNU4-88P-201ENST00000411220 RABGGTBP53611 331 aa-0.57□□□□□ -2.5
RNU4-88P-201ENST00000411220 SUPT20HL1Q3ZLR7 823 aa-0.57□□□□□ -2.5
RNU4-88P-201ENST00000411220 WWC2Q6AWC2 1192 aa-0.57□□□□□ -2.5
RNU4-88P-201ENST00000411220 SLC18B1Q6NT16 456 aa-0.57□□□□□ -2.5
RNU4-88P-201ENST00000411220 RELL1Q8IUW5 271 aa-0.57□□□□□ -2.5
RNU4-88P-201ENST00000411220 FNBP4Q8N3X1 1017 aaPredicted RBP-0.57□□□□□ -2.5
RNU4-88P-201ENST00000411220 OGFOD1Q8N543 542 aa-0.57□□□□□ -2.5
RNU4-88P-201ENST00000411220 PGBD4Q96DM1 585 aa-0.57□□□□□ -2.5
RNU4-88P-201ENST00000411220 RHOVQ96L33 236 aa-0.57□□□□□ -2.5
RNU4-88P-201ENST00000411220 YIPF4Q9BSR8 244 aa-0.57□□□□□ -2.5
RNU4-88P-201ENST00000411220 IL17RBQ9NRM6 502 aa-0.57□□□□□ -2.5
RNU4-88P-201ENST00000411220 TMEM39AQ9NV64 488 aa-0.57□□□□□ -2.5
RNU4-88P-201ENST00000411220 SORCS3Q9UPU3 1222 aa-0.57□□□□□ -2.5
RNU4-88P-201ENST00000411220 SIT1Q9Y3P8 196 aa-0.57□□□□□ -2.5
RNU4-88P-201ENST00000411220 ZNF469Q96JG9 3925 aaPredicted RBP-0.57□□□□□ -2.5
RNU4-88P-201ENST00000411220 AOX1Q06278 1338 aa-0.58□□□□□ -2.5
RNU4-88P-201ENST00000411220 DKK1O94907 266 aa-0.58□□□□□ -2.5
RNU4-88P-201ENST00000411220 TRIM37O94972 964 aa-0.58□□□□□ -2.5
RNU4-88P-201ENST00000411220 ZNF883P0CG24 379 aa-0.58□□□□□ -2.5
RNU4-88P-201ENST00000411220 PLA2G2AP14555 144 aa-0.58□□□□□ -2.5
RNU4-88P-201ENST00000411220 RRADP55042 308 aa-0.58□□□□□ -2.5
RNU4-88P-201ENST00000411220 SEC13P55735 322 aa-0.58□□□□□ -2.5
RNU4-88P-201ENST00000411220 RIN1Q13671 783 aa-0.58□□□□□ -2.5
RNU4-88P-201ENST00000411220 FAM214AQ32MH5 1076 aa-0.58□□□□□ -2.5
RNU4-88P-201ENST00000411220 C14orf177Q52M58 125 aa-0.58□□□□□ -2.5
RNU4-88P-201ENST00000411220 ZNF618Q5T7W0 954 aa-0.58□□□□□ -2.5
RNU4-88P-201ENST00000411220 SLC6A19Q695T7 634 aa-0.58□□□□□ -2.5
RNU4-88P-201ENST00000411220 PLEKHA7Q6IQ23 1121 aa-0.58□□□□□ -2.5
RNU4-88P-201ENST00000411220 TMEM192Q8IY95 271 aa-0.58□□□□□ -2.5
RNU4-88P-201ENST00000411220 SLC34A3Q8N130 599 aa-0.58□□□□□ -2.5
RNU4-88P-201ENST00000411220 LZTR1Q8N653 840 aa-0.58□□□□□ -2.5
RNU4-88P-201ENST00000411220 SHCBP1Q8NEM2 672 aa-0.58□□□□□ -2.5
RNU4-88P-201ENST00000411220 ZNF594Q96JF6 807 aaPredicted RBP-0.58□□□□□ -2.5
RNU4-88P-201ENST00000411220 CTRCQ99895 268 aa-0.58□□□□□ -2.5
RNU4-88P-201ENST00000411220 SPRY4Q9C004 299 aa-0.58□□□□□ -2.5
RNU4-88P-201ENST00000411220 C12orf49Q9H741 205 aa-0.58□□□□□ -2.5
RNU4-88P-201ENST00000411220 CBX8Q9HC52 389 aa-0.58□□□□□ -2.5
RNU4-88P-201ENST00000411220 CCDC177Q9NQR7 707 aaPredicted RBP-0.58□□□□□ -2.5
RNU4-88P-201ENST00000411220 ZNF581Q9P0T4 197 aa-0.58□□□□□ -2.5
RNU4-88P-201ENST00000411220 TP53TG3Q9ULZ0 132 aa-0.58□□□□□ -2.5
RNU4-88P-201ENST00000411220 ADAMTS5Q9UNA0 930 aa-0.58□□□□□ -2.5
RNU4-88P-201ENST00000411220 NOVA2Q9UNW9 492 aaKnown RBP-0.58□□□□□ -2.5
RNU4-88P-201ENST00000411220 FBN2P35556 2912 aa-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 WDR81Q562E7 1941 aa-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 SCAF4O95104 1147 aaKnown RBP-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 CRYABP02511 175 aaKnown RBP-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 TMEM191BP0C7N4 346 aa-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 GYPEP15421 78 aa-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 GRK4P32298 578 aa-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 XGP55808 180 aa-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 IRX6P78412 446 aaPredicted RBP-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 HTRA4P83105 476 aaPredicted RBP-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 INPP5AQ14642 412 aa-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 NFATC4Q14934 902 aa-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 TBR1Q16650 682 aa-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 KRTAP20-2Q3LI61 65 aa-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 CYP2R1Q6VVX0 501 aa-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 ZNF782Q6ZMW2 699 aaPredicted RBP-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 DAAM2Q86T65 1068 aa-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 COL23A1Q86Y22 540 aaPredicted RBP-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 NANOGP1Q8N7R0 232 aa-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 TTC16Q8NEE8 873 aa-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 MDGA1Q8NFP4 955 aa-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 MAFAQ8NHW3 353 aaPredicted RBP-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 SNX29Q8TEQ0 813 aa-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 CYB5D2Q8WUJ1 264 aa-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 TMEM87BQ96K49 555 aa-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 LINC00167Q96N53 147 aa-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 WDR24Q96S15 920 aa-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 NKX2-4Q9H2Z4 354 aa-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 MANSC1Q9H8J5 431 aa-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 NCOA5Q9HCD5 579 aaKnown RBP-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 PRR13Q9NZ81 148 aa-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 DLGAP2Q9P1A6 1054 aa-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 TJP2Q9UDY2 1190 aa-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 GPN3Q9UHW5 284 aaPredicted RBP-0.59□□□□□ -2.5
RNU4-88P-201ENST00000411220 CACNA1FO60840 1977 aa-0.59□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms