RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 PRAMEF22A3QJZ6 481 aa2.54□□□□□ -2
RNU2-55P-201ENST00000411146 PRAMEF25A6NGN4 478 aa2.54□□□□□ -2
RNU2-55P-201ENST00000411146 SCDO00767 359 aa2.54□□□□□ -2
RNU2-55P-201ENST00000411146 RPS6KA4O75676 772 aa2.54□□□□□ -2
RNU2-55P-201ENST00000411146 CRTAMO95727 393 aa2.54□□□□□ -2
RNU2-55P-201ENST00000411146 HMGCRP04035 888 aa2.54□□□□□ -2
RNU2-55P-201ENST00000411146 KCNA6P17658 529 aa2.54□□□□□ -2
RNU2-55P-201ENST00000411146 ACRV1P26436 265 aa2.54□□□□□ -2
RNU2-55P-201ENST00000411146 ECE1P42892 770 aa2.54□□□□□ -2
RNU2-55P-201ENST00000411146 SCNN1GP51170 649 aa2.54□□□□□ -2
RNU2-55P-201ENST00000411146 INHBEP58166 350 aa2.54□□□□□ -2
RNU2-55P-201ENST00000411146 ATP2C1P98194 919 aaPredicted RBP2.54□□□□□ -2
RNU2-55P-201ENST00000411146 GUCY1A3Q02108 690 aa2.54□□□□□ -2
RNU2-55P-201ENST00000411146 HNRNPA0Q13151 305 aaKnown RBP2.54□□□□□ -2
RNU2-55P-201ENST00000411146 PAK1Q13153 545 aa2.54□□□□□ -2
RNU2-55P-201ENST00000411146 ADAM15Q13444 863 aa2.54□□□□□ -2
RNU2-55P-201ENST00000411146 TUBA3CQ13748 450 aa2.54□□□□□ -2
RNU2-55P-201ENST00000411146 RRP1BQ14684 758 aaKnown RBP2.54□□□□□ -2
RNU2-55P-201ENST00000411146 GRM7Q14831 915 aa2.54□□□□□ -2
RNU2-55P-201ENST00000411146 ABHD17CQ6PCB6 329 aa2.54□□□□□ -2
RNU2-55P-201ENST00000411146 TUBA3EQ6PEY2 450 aa2.54□□□□□ -2
RNU2-55P-201ENST00000411146 C16orf59Q7L2K0 433 aa2.54□□□□□ -2
RNU2-55P-201ENST00000411146 SGMS1Q86VZ5 419 aa2.54□□□□□ -2
RNU2-55P-201ENST00000411146 RPUSD2Q8IZ73 545 aaKnown RBP2.54□□□□□ -2
RNU2-55P-201ENST00000411146 CISD2Q8N5K1 135 aaKnown RBP2.54□□□□□ -2
RNU2-55P-201ENST00000411146 ZFYVE21Q9BQ24 234 aa2.54□□□□□ -2
RNU2-55P-201ENST00000411146 SPATA9Q9BWV2 254 aa2.54□□□□□ -2
RNU2-55P-201ENST00000411146 GPRC5BQ9NZH0 403 aa2.54□□□□□ -2
RNU2-55P-201ENST00000411146 COQ6Q9Y2Z9 468 aa2.54□□□□□ -2
RNU2-55P-201ENST00000411146 DMRT1Q9Y5R6 373 aa2.54□□□□□ -2
RNU2-55P-201ENST00000411146 TNFRSF18Q9Y5U5 241 aa2.54□□□□□ -2
RNU2-55P-201ENST00000411146 ATP23Q9Y6H3 246 aa2.54□□□□□ -2
RNU2-55P-201ENST00000411146 WDR33Q9C0J8 1336 aaKnown RBP2.53□□□□□ -2
RNU2-55P-201ENST00000411146 CCDC66A2RUB6 948 aa2.53□□□□□ -2
RNU2-55P-201ENST00000411146 C2orf78A6NCI8 922 aa2.53□□□□□ -2
RNU2-55P-201ENST00000411146 CCDC85CA6NKD9 419 aa2.53□□□□□ -2
RNU2-55P-201ENST00000411146 ARVCFO00192 962 aa2.53□□□□□ -2
RNU2-55P-201ENST00000411146 WNT9AO14904 365 aa2.53□□□□□ -2
RNU2-55P-201ENST00000411146 CUTAO60888 179 aa2.53□□□□□ -2
RNU2-55P-201ENST00000411146 RASGRP1O95267 797 aa2.53□□□□□ -2
RNU2-55P-201ENST00000411146 RAB33AQ14088 237 aa2.53□□□□□ -2
RNU2-55P-201ENST00000411146 ZMAT1Q5H9K5 638 aa2.53□□□□□ -2
RNU2-55P-201ENST00000411146 MTDHQ86UE4 582 aaKnown RBP2.53□□□□□ -2
RNU2-55P-201ENST00000411146 NOSTRINQ8IVI9 506 aa2.53□□□□□ -2
RNU2-55P-201ENST00000411146 D2HGDHQ8N465 521 aa2.53□□□□□ -2
RNU2-55P-201ENST00000411146 SLC7A14Q8TBB6 771 aa2.53□□□□□ -2
RNU2-55P-201ENST00000411146 ASB15Q8WXK1 588 aa2.53□□□□□ -2
RNU2-55P-201ENST00000411146 FBXW5Q969U6 566 aa2.53□□□□□ -2
RNU2-55P-201ENST00000411146 SCLYQ96I15 445 aa2.53□□□□□ -2
RNU2-55P-201ENST00000411146 RPL10LQ96L21 214 aaKnown RBP2.53□□□□□ -2
RNU2-55P-201ENST00000411146 GPHA2Q96T91 129 aa2.53□□□□□ -2
RNU2-55P-201ENST00000411146 ALG1Q9BT22 464 aa2.53□□□□□ -2
RNU2-55P-201ENST00000411146 BTBD2Q9BX70 525 aa2.53□□□□□ -2
RNU2-55P-201ENST00000411146 PUF60Q9UHX1 559 aaKnown RBP2.53□□□□□ -2
RNU2-55P-201ENST00000411146 FAM184BQ9ULE4 1060 aa2.53□□□□□ -2
RNU2-55P-201ENST00000411146 TRBV23-1A0A0A0MS06 115 aa2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 A0A0G2JNJ9 132 aa2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 FAM20BO75063 409 aa2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 NR4A1P22736 598 aa2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 MCM7P33993 719 aa2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 ADAM8P78325 824 aa2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 LACTBP83111 547 aaPredicted RBP2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 FSTL1Q12841 308 aa2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 RIN1Q13671 783 aa2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 CATSPEREQ5SY80 951 aa2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 TMEM200BQ69YZ2 307 aa2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 DPP8Q6V1X1 898 aaPredicted RBP2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 OTOP2Q7RTS6 562 aa2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 TMPRSS6Q8IU80 811 aa2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 VRK3Q8IV63 474 aa2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 SCUBE1Q8IWY4 988 aa2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 NLGN4XQ8N0W4 816 aa2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 ZBTB38Q8NAP3 1195 aaPredicted RBP2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 SHCBP1Q8NEM2 672 aa2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 ERCC4Q92889 916 aaPredicted RBP2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 PTPRN2Q92932 1015 aa2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 FOXRED1Q96CU9 486 aaPredicted RBP2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 SCYL1Q96KG9 808 aa2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 GBP4Q96PP9 640 aa2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 GMLQ99445 158 aa2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 TTPALQ9BTX7 342 aa2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 OR10A5Q9H207 317 aa2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 OR10A2Q9H208 303 aa2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 ZNF703Q9H7S9 590 aaPredicted RBP2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 SLC52A2Q9HAB3 445 aa2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 Q9UFV3 132 aa2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 REXO2Q9Y3B8 237 aaKnown RBP2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 MSRB2Q9Y3D2 182 aa2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 R3HCC1Q9Y3T6 440 aaKnown RBP2.52□□□□□ -2.01
RNU2-55P-201ENST00000411146 KRTAP23-1A1A580 65 aa2.51□□□□□ -2.01
RNU2-55P-201ENST00000411146 FAM221BA6H8Z2 402 aa2.51□□□□□ -2.01
RNU2-55P-201ENST00000411146 IQCA1LA6NCM1 817 aa2.51□□□□□ -2.01
RNU2-55P-201ENST00000411146 CAPN14A8MX76 684 aa2.51□□□□□ -2.01
RNU2-55P-201ENST00000411146 GOLGA6L22H0YM25 854 aa2.51□□□□□ -2.01
RNU2-55P-201ENST00000411146 DVL2O14641 736 aa2.51□□□□□ -2.01
RNU2-55P-201ENST00000411146 SLC26A4O43511 780 aa2.51□□□□□ -2.01
RNU2-55P-201ENST00000411146 CLASP2O75122 1294 aaKnown RBP2.51□□□□□ -2.01
RNU2-55P-201ENST00000411146 STC2O76061 302 aa2.51□□□□□ -2.01
RNU2-55P-201ENST00000411146 ZBTB48P10074 688 aaPredicted RBP2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms