RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 CCDC60Q8IWA6 550 aaPredicted RBP6.11□□□□□ -1.43
EPHA4-202ENST00000409854 FAM114A1Q8IWE2 563 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 DAW1Q8N136 415 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 CSGALNACT2Q8N6G5 542 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 ZNF507Q8TCN5 953 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 SRRTQ9BXP5 876 aaKnown RBP6.11□□□□□ -1.43
EPHA4-202ENST00000409854 DDX41Q9UJV9 622 aaKnown RBP6.11□□□□□ -1.43
EPHA4-202ENST00000409854 DIS3Q9Y2L1 958 aaKnown RBP6.11□□□□□ -1.43
EPHA4-202ENST00000409854 MAFBQ9Y5Q3 323 aaPredicted RBP6.11□□□□□ -1.43
EPHA4-202ENST00000409854 ITIH6Q6UXX5 1313 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 ZMYM2Q9UBW7 1377 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 RBM47A0AV96 593 aaKnown RBP6.11□□□□□ -1.43
EPHA4-202ENST00000409854 ESPNB1AK53 854 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 PPP1R37O75864 691 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 TPM2P07951 284 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 PTGS1P23219 599 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 HOXD13P35453 343 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 ZNF157P51786 506 aaPredicted RBP6.11□□□□□ -1.43
EPHA4-202ENST00000409854 COPB1P53618 953 aaKnown RBP6.11□□□□□ -1.43
EPHA4-202ENST00000409854 GSDMDP57764 484 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 LRRC41Q15345 812 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 NFIL3Q16649 462 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 EDRF1Q3B7T1 1238 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 MIS18BP1Q6P0N0 1132 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 CCDC62Q6P9F0 684 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 MAMDC4Q6UXC1 1216 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 SEPT14Q6ZU15 432 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 ANO5Q75V66 913 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 DRC7Q8IY82 874 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 AFAP1L1Q8TED9 768 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 PARVGQ9HBI0 331 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 GABBR1Q9UBS5 961 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 TRAF3IP3Q9Y228 551 aa6.11□□□□□ -1.43
EPHA4-202ENST00000409854 THSD7BQ9C0I4 1608 aa6.1□□□□□ -1.43
EPHA4-202ENST00000409854 GSTTP1A0A1W2PQM5 241 aa6.1□□□□□ -1.43
EPHA4-202ENST00000409854 BACH1O14867 736 aa6.1□□□□□ -1.43
EPHA4-202ENST00000409854 HIP1RO75146 1068 aa6.1□□□□□ -1.43
EPHA4-202ENST00000409854 FAM13AO94988 1023 aa6.1□□□□□ -1.43
EPHA4-202ENST00000409854 ARIH2O95376 493 aa6.1□□□□□ -1.43
EPHA4-202ENST00000409854 ADORA2AP29274 412 aa6.1□□□□□ -1.43
EPHA4-202ENST00000409854 MAPK4P31152 587 aa6.1□□□□□ -1.43
EPHA4-202ENST00000409854 MARSP56192 900 aaKnown RBP6.1□□□□□ -1.43
EPHA4-202ENST00000409854 INHBEP58166 350 aa6.1□□□□□ -1.43
EPHA4-202ENST00000409854 METTL7BQ6UX53 244 aa6.1□□□□□ -1.43
EPHA4-202ENST00000409854 CYFIP1Q7L576 1253 aa6.1□□□□□ -1.43
EPHA4-202ENST00000409854 TMC6Q7Z403 805 aa6.1□□□□□ -1.43
EPHA4-202ENST00000409854 GPR142Q7Z601 462 aa6.1□□□□□ -1.43
EPHA4-202ENST00000409854 CEP63Q96MT8 703 aa6.1□□□□□ -1.43
EPHA4-202ENST00000409854 KATNBL1Q9H079 304 aa6.1□□□□□ -1.43
EPHA4-202ENST00000409854 ST6GALNAC4Q9H4F1 302 aa6.1□□□□□ -1.43
EPHA4-202ENST00000409854 PDLIM7Q9NR12 457 aa6.1□□□□□ -1.43
EPHA4-202ENST00000409854 FGFR1OPO95684 399 aaKnown RBP6.1□□□□□ -1.43
EPHA4-202ENST00000409854 MYBP10242 640 aa6.1□□□□□ -1.43
EPHA4-202ENST00000409854 ATP4AP20648 1035 aa6.1□□□□□ -1.43
EPHA4-202ENST00000409854 ARMCX2Q7L311 632 aa6.1□□□□□ -1.43
EPHA4-202ENST00000409854 IFNL1Q8IU54 200 aa6.1□□□□□ -1.43
EPHA4-202ENST00000409854 SMC1BQ8NDV3 1235 aa6.1□□□□□ -1.43
EPHA4-202ENST00000409854 ANKRD20A12PQ8NF67 263 aa6.1□□□□□ -1.43
EPHA4-202ENST00000409854 CACTINQ8WUQ7 758 aaKnown RBP6.1□□□□□ -1.43
EPHA4-202ENST00000409854 TMEM174Q8WUU8 243 aa6.1□□□□□ -1.43
EPHA4-202ENST00000409854 CNOT6LQ96LI5 555 aaKnown RBP6.1□□□□□ -1.43
EPHA4-202ENST00000409854 TSG101Q99816 390 aa6.1□□□□□ -1.43
EPHA4-202ENST00000409854 VTA1Q9NP79 307 aa6.1□□□□□ -1.43
EPHA4-202ENST00000409854 TBC1D7Q9P0N9 293 aa6.1□□□□□ -1.43
EPHA4-202ENST00000409854 SLC15A5A6NIM6 579 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 LGALS16A8MUM7 142 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 PDXKO00764 312 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 TEX33O43247 280 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 LGR5O75473 907 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 PRKCEQ02156 737 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 IRF5Q13568 498 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 KNOP1Q1ED39 458 aaKnown RBP6.09□□□□□ -1.43
EPHA4-202ENST00000409854 FILIP1LQ4L180 1135 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 CELF3Q5SZQ8 465 aaKnown RBP6.09□□□□□ -1.43
EPHA4-202ENST00000409854 SPECC1LQ69YQ0 1117 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 SWSAP1Q6NVH7 229 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 ARMCX5Q6P1M9 558 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 OTUD6AQ7L8S5 288 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 ZNF720Q7Z2F6 126 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 MTERF4Q7Z6M4 381 aaKnown RBP6.09□□□□□ -1.43
EPHA4-202ENST00000409854 PLEKHH3Q7Z736 793 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 LRRC8AQ8IWT6 810 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 CCDC150Q8NCX0 1101 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 KCNN1Q92952 543 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 CEP89Q96ST8 783 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 PCYT2Q99447 389 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 NIFKQ9BYG3 293 aaKnown RBP6.09□□□□□ -1.43
EPHA4-202ENST00000409854 TYW1Q9NV66 732 aaKnown RBP6.09□□□□□ -1.43
EPHA4-202ENST00000409854 EMSYQ7Z589 1322 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 TMEM150BA6NC51 233 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 ZNF500O60304 480 aaPredicted RBP6.09□□□□□ -1.43
EPHA4-202ENST00000409854 GGPS1O95749 300 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 PLS3P13797 630 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 NCKAP1LP55160 1127 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 RTP1P59025 263 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 CCZ1BP86790 482 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 CCZ1P86791 482 aaPredicted RBP6.09□□□□□ -1.43
EPHA4-202ENST00000409854 FKBP3Q00688 224 aaKnown RBP6.09□□□□□ -1.43
EPHA4-202ENST00000409854 ALCAMQ13740 583 aa6.09□□□□□ -1.43
EPHA4-202ENST00000409854 LY6KQ17RY6 165 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms