RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 IREB2P48200 963 aaKnown RBP27.12■■□□□ 1.93
DNMT3A-206ENST00000406659 PSMC5P62195 406 aa27.12■■□□□ 1.93
DNMT3A-206ENST00000406659 KIAA1328Q86T90 577 aa27.12■■□□□ 1.93
DNMT3A-206ENST00000406659 C4orf19Q8IY42 314 aa27.12■■□□□ 1.93
DNMT3A-206ENST00000406659 CCDC42Q96M95 316 aa27.12■■□□□ 1.93
DNMT3A-206ENST00000406659 A1CFQ9NQ94 594 aaKnown RBP27.12■■□□□ 1.93
DNMT3A-206ENST00000406659 CEP72Q9P209 647 aa27.12■■□□□ 1.93
DNMT3A-206ENST00000406659 MYO1AQ9UBC5 1043 aa27.12■■□□□ 1.93
DNMT3A-206ENST00000406659 AKAP3O75969 853 aa27.11■■□□□ 1.93
DNMT3A-206ENST00000406659 CCNE2O96020 404 aa27.11■■□□□ 1.93
DNMT3A-206ENST00000406659 YWHABP31946 246 aaKnown RBP27.11■■□□□ 1.93
DNMT3A-206ENST00000406659 RARRES1P49788 294 aa27.11■■□□□ 1.93
DNMT3A-206ENST00000406659 HERVK_113P62684 666 aa27.11■■□□□ 1.93
DNMT3A-206ENST00000406659 MAPK7Q13164 816 aa27.11■■□□□ 1.93
DNMT3A-206ENST00000406659 NFIL3Q16649 462 aa27.11■■□□□ 1.93
DNMT3A-206ENST00000406659 C9orf131Q5VYM1 1079 aa27.11■■□□□ 1.93
DNMT3A-206ENST00000406659 PDXDC1Q6P996 788 aa27.11■■□□□ 1.93
DNMT3A-206ENST00000406659 RDM1Q8NG50 284 aa27.11■■□□□ 1.93
DNMT3A-206ENST00000406659 BAP1Q92560 729 aa27.11■■□□□ 1.93
DNMT3A-206ENST00000406659 INPP4AQ96PE3 977 aaPredicted RBP27.11■■□□□ 1.93
DNMT3A-206ENST00000406659 MAP7D2Q96T17 732 aa27.11■■□□□ 1.93
DNMT3A-206ENST00000406659 CRACR2AQ9BSW2 395 aa27.11■■□□□ 1.93
DNMT3A-206ENST00000406659 HAUS4Q9H6D7 363 aa27.11■■□□□ 1.93
DNMT3A-206ENST00000406659 ZMYM2Q9UBW7 1377 aa27.1■■□□□ 1.93
DNMT3A-206ENST00000406659 LRRC53A6NM62 1247 aa27.1■■□□□ 1.93
DNMT3A-206ENST00000406659 AFPP02771 609 aaKnown RBP27.1■■□□□ 1.93
DNMT3A-206ENST00000406659 XRCC5P13010 732 aaKnown RBP27.1■■□□□ 1.93
DNMT3A-206ENST00000406659 ZNF746Q6NUN9 644 aaPredicted RBP27.1■■□□□ 1.93
DNMT3A-206ENST00000406659 HS2ST1Q7LGA3 356 aa27.1■■□□□ 1.93
DNMT3A-206ENST00000406659 DAW1Q8N136 415 aa27.1■■□□□ 1.93
DNMT3A-206ENST00000406659 MNS1Q8NEH6 495 aa27.1■■□□□ 1.93
DNMT3A-206ENST00000406659 SYT17Q9BSW7 474 aa27.1■■□□□ 1.93
DNMT3A-206ENST00000406659 NUCKS1Q9H1E3 243 aaKnown RBP27.1■■□□□ 1.93
DNMT3A-206ENST00000406659 WDR90Q96KV7 1748 aa27.1■■□□□ 1.93
DNMT3A-206ENST00000406659 ABL1P00519 1130 aa27.09■■□□□ 1.93
DNMT3A-206ENST00000406659 UGCGQ16739 394 aa27.09■■□□□ 1.93
DNMT3A-206ENST00000406659 MAEAQ7L5Y9 396 aa27.09■■□□□ 1.93
DNMT3A-206ENST00000406659 CHST13Q8NET6 341 aa27.09■■□□□ 1.93
DNMT3A-206ENST00000406659 LARSQ9P2J5 1176 aaKnown RBP27.09■■□□□ 1.93
DNMT3A-206ENST00000406659 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.09■■□□□ 1.93
DNMT3A-206ENST00000406659 V9GYY5 206 aaPredicted RBP27.09■■□□□ 1.93
DNMT3A-206ENST00000406659 MYH11P35749 1972 aa27.09■■□□□ 1.93
DNMT3A-206ENST00000406659 SPA17Q15506 151 aa27.09■■□□□ 1.93
DNMT3A-206ENST00000406659 TREML2Q5T2D2 321 aa27.09■■□□□ 1.93
DNMT3A-206ENST00000406659 KSR1Q8IVT5 923 aa27.09■■□□□ 1.93
DNMT3A-206ENST00000406659 SLC35F6Q8N357 371 aa27.09■■□□□ 1.93
DNMT3A-206ENST00000406659 CNKSR2Q8WXI2 1034 aa27.09■■□□□ 1.93
DNMT3A-206ENST00000406659 CDHR1Q96JP9 859 aa27.09■■□□□ 1.93
DNMT3A-206ENST00000406659 SENP7Q9BQF6 1050 aa27.09■■□□□ 1.93
DNMT3A-206ENST00000406659 MOV10L1Q9BXT6 1211 aaKnown RBP27.09■■□□□ 1.93
DNMT3A-206ENST00000406659 GUCA1BQ9UMX6 200 aa27.09■■□□□ 1.93
DNMT3A-206ENST00000406659 USO1O60763 962 aaKnown RBP27.08■■□□□ 1.93
DNMT3A-206ENST00000406659 STAM2O75886 525 aa27.08■■□□□ 1.93
DNMT3A-206ENST00000406659 NOL4O94818 638 aa27.08■■□□□ 1.93
DNMT3A-206ENST00000406659 CASP4P49662 377 aa27.08■■□□□ 1.93
DNMT3A-206ENST00000406659 GADL1Q6ZQY3 521 aa27.08■■□□□ 1.93
DNMT3A-206ENST00000406659 GOLGA5Q8TBA6 731 aa27.08■■□□□ 1.93
DNMT3A-206ENST00000406659 TIPINQ9BVW5 301 aa27.08■■□□□ 1.93
DNMT3A-206ENST00000406659 GBP3Q9H0R5 595 aa27.08■■□□□ 1.93
DNMT3A-206ENST00000406659 NLRC4Q9NPP4 1024 aa27.08■■□□□ 1.93
DNMT3A-206ENST00000406659 ANKEF1Q9NU02 776 aa27.08■■□□□ 1.93
DNMT3A-206ENST00000406659 PCDHA10Q9Y5I2 948 aa27.08■■□□□ 1.93
DNMT3A-206ENST00000406659 MRFAP1Q9Y605 127 aa27.08■■□□□ 1.93
DNMT3A-206ENST00000406659 CTAGE9A4FU28 777 aa27.07■■□□□ 1.92
DNMT3A-206ENST00000406659 YBX3P16989 372 aaKnown RBP eCLIP27.07■■□□□ 1.92
DNMT3A-206ENST00000406659 PSMC2P35998 433 aaKnown RBP27.07■■□□□ 1.92
DNMT3A-206ENST00000406659 POLR2FP61218 127 aaKnown RBP27.07■■□□□ 1.92
DNMT3A-206ENST00000406659 DCAF17Q5H9S7 520 aaPredicted RBP27.07■■□□□ 1.92
DNMT3A-206ENST00000406659 ZNF662Q6ZS27 426 aa27.07■■□□□ 1.92
DNMT3A-206ENST00000406659 SYCP3Q8IZU3 236 aa27.07■■□□□ 1.92
DNMT3A-206ENST00000406659 JAKMIP2Q96AA8 810 aa27.07■■□□□ 1.92
DNMT3A-206ENST00000406659 CARD6Q9BX69 1037 aa27.07■■□□□ 1.92
DNMT3A-206ENST00000406659 DEF6Q9H4E7 631 aa27.07■■□□□ 1.92
DNMT3A-206ENST00000406659 ARHGAP20Q9P2F6 1191 aa27.07■■□□□ 1.92
DNMT3A-206ENST00000406659 K7ENM7 598 aa27.07■■□□□ 1.92
DNMT3A-206ENST00000406659 PLEKP08567 350 aaPredicted RBP27.07■■□□□ 1.92
DNMT3A-206ENST00000406659 MAPTP10636 758 aaKnown RBP27.07■■□□□ 1.92
DNMT3A-206ENST00000406659 NF2P35240 595 aa27.07■■□□□ 1.92
DNMT3A-206ENST00000406659 EIF4A3P38919 411 aaKnown RBP27.07■■□□□ 1.92
DNMT3A-206ENST00000406659 ALCAMQ13740 583 aa27.07■■□□□ 1.92
DNMT3A-206ENST00000406659 CCDC122Q5T0U0 273 aa27.07■■□□□ 1.92
DNMT3A-206ENST00000406659 TCERG1LQ5VWI1 586 aa27.07■■□□□ 1.92
DNMT3A-206ENST00000406659 DPY19L2Q6NUT2 758 aa27.07■■□□□ 1.92
DNMT3A-206ENST00000406659 SYN2Q92777 582 aaPredicted RBP27.07■■□□□ 1.92
DNMT3A-206ENST00000406659 STRA6Q9BX79 667 aa27.07■■□□□ 1.92
DNMT3A-206ENST00000406659 IKZF4Q9H2S9 585 aa27.07■■□□□ 1.92
DNMT3A-206ENST00000406659 ELP3Q9H9T3 547 aa27.07■■□□□ 1.92
DNMT3A-206ENST00000406659 KRT86O43790 486 aa27.06■■□□□ 1.92
DNMT3A-206ENST00000406659 GNPTABQ3T906 1256 aa27.06■■□□□ 1.92
DNMT3A-206ENST00000406659 XKR9Q5GH70 373 aa27.06■■□□□ 1.92
DNMT3A-206ENST00000406659 SFMBT2Q5VUG0 894 aa27.06■■□□□ 1.92
DNMT3A-206ENST00000406659 LBX2Q6XYB7 198 aa27.06■■□□□ 1.92
DNMT3A-206ENST00000406659 FAM186BQ8IYM0 893 aa27.06■■□□□ 1.92
DNMT3A-206ENST00000406659 TRIM10Q9UDY6 481 aa27.06■■□□□ 1.92
DNMT3A-206ENST00000406659 BACH1O14867 736 aa27.05■■□□□ 1.92
DNMT3A-206ENST00000406659 PLS3P13797 630 aa27.05■■□□□ 1.92
DNMT3A-206ENST00000406659 KCNA2P16389 499 aa27.05■■□□□ 1.92
DNMT3A-206ENST00000406659 UTP14CQ5TAP6 766 aaKnown RBP27.05■■□□□ 1.92
DNMT3A-206ENST00000406659 LRRN4CLQ8ND94 238 aa27.05■■□□□ 1.92
DNMT3A-206ENST00000406659 DRC1Q96MC2 740 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms