RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 LRIG3Q6UXM1 1119 aa21.68■■□□□ 1.06
CCDC47-202ENST00000403162 KAT2BQ92831 832 aa21.68■■□□□ 1.06
CCDC47-202ENST00000403162 PBKQ96KB5 322 aa21.68■■□□□ 1.06
CCDC47-202ENST00000403162 EMILIN3Q9NT22 766 aa21.68■■□□□ 1.06
CCDC47-202ENST00000403162 GPRC5DQ9NZD1 345 aa21.68■■□□□ 1.06
CCDC47-202ENST00000403162 TBC1D7Q9P0N9 293 aa21.68■■□□□ 1.06
CCDC47-202ENST00000403162 FRMD3A2A2Y4 597 aa21.68■■□□□ 1.06
CCDC47-202ENST00000403162 PPP1R11O60927 126 aaPredicted RBP21.68■■□□□ 1.06
CCDC47-202ENST00000403162 NPM3O75607 178 aaKnown RBP21.68■■□□□ 1.06
CCDC47-202ENST00000403162 SSBP05455 408 aaKnown RBP eCLIP21.68■■□□□ 1.06
CCDC47-202ENST00000403162 PLA2G4BP0C869 781 aa21.68■■□□□ 1.06
CCDC47-202ENST00000403162 EPS15P42566 896 aa21.68■■□□□ 1.06
CCDC47-202ENST00000403162 USP11P51784 963 aa21.68■■□□□ 1.06
CCDC47-202ENST00000403162 GTF2A1P52655 376 aaPredicted RBP21.68■■□□□ 1.06
CCDC47-202ENST00000403162 ARID5AQ03989 594 aa21.68■■□□□ 1.06
CCDC47-202ENST00000403162 ZNF543Q08ER8 600 aa21.68■■□□□ 1.06
CCDC47-202ENST00000403162 RPS6KA1Q15418 735 aa21.68■■□□□ 1.06
CCDC47-202ENST00000403162 IFI16Q16666 785 aaKnown RBP21.68■■□□□ 1.06
CCDC47-202ENST00000403162 LRRC47Q8N1G4 583 aaKnown RBP21.68■■□□□ 1.06
CCDC47-202ENST00000403162 PLCB1Q9NQ66 1216 aa21.68■■□□□ 1.06
CCDC47-202ENST00000403162 BZW2Q9Y6E2 419 aaKnown RBP21.68■■□□□ 1.06
CCDC47-202ENST00000403162 ATP8B3O60423 1300 aa21.68■■□□□ 1.06
CCDC47-202ENST00000403162 E9PMD0 336 aa21.67■■□□□ 1.06
CCDC47-202ENST00000403162 MARCH6O60337 910 aa21.67■■□□□ 1.06
CCDC47-202ENST00000403162 PPP1R37O75864 691 aa21.67■■□□□ 1.06
CCDC47-202ENST00000403162 MRPL12P52815 198 aaKnown RBP21.67■■□□□ 1.06
CCDC47-202ENST00000403162 KCNH2Q12809 1159 aa21.67■■□□□ 1.06
CCDC47-202ENST00000403162 ADAM9Q13443 819 aa21.67■■□□□ 1.06
CCDC47-202ENST00000403162 CUL1Q13616 776 aa21.67■■□□□ 1.06
CCDC47-202ENST00000403162 HERC4Q5GLZ8 1057 aaPredicted RBP21.67■■□□□ 1.06
CCDC47-202ENST00000403162 GPBP1Q86WP2 473 aa21.67■■□□□ 1.06
CCDC47-202ENST00000403162 ADGRF4Q8IZF3 695 aa21.67■■□□□ 1.06
CCDC47-202ENST00000403162 SCFD2Q8WU76 684 aa21.67■■□□□ 1.06
CCDC47-202ENST00000403162 GPCPD1Q9NPB8 672 aa21.67■■□□□ 1.06
CCDC47-202ENST00000403162 SWAP70Q9UH65 585 aa21.67■■□□□ 1.06
CCDC47-202ENST00000403162 PITPNM2Q9BZ72 1349 aa21.67■■□□□ 1.06
CCDC47-202ENST00000403162 BHMG1C9JSJ3 638 aaPredicted RBP21.67■■□□□ 1.06
CCDC47-202ENST00000403162 CETN3O15182 167 aa21.67■■□□□ 1.06
CCDC47-202ENST00000403162 ENTPD3O75355 529 aa21.67■■□□□ 1.06
CCDC47-202ENST00000403162 KIF4AO95239 1232 aa21.67■■□□□ 1.06
CCDC47-202ENST00000403162 HLA-DOAP06340 250 aa21.67■■□□□ 1.06
CCDC47-202ENST00000403162 CYP11B2P19099 503 aa21.67■■□□□ 1.06
CCDC47-202ENST00000403162 GABPAQ06546 454 aa21.67■■□□□ 1.06
CCDC47-202ENST00000403162 DPY19L2P1Q6NXN4 242 aa21.67■■□□□ 1.06
CCDC47-202ENST00000403162 IRF2BP2Q7Z5L9 587 aa21.67■■□□□ 1.06
CCDC47-202ENST00000403162 ACTRT1Q8TDG2 376 aa21.67■■□□□ 1.06
CCDC47-202ENST00000403162 KANSL2Q9H9L4 492 aa21.67■■□□□ 1.06
CCDC47-202ENST00000403162 KIAA1024Q9UPX6 916 aa21.67■■□□□ 1.06
CCDC47-202ENST00000403162 PLAAQ9Y263 795 aa21.67■■□□□ 1.06
CCDC47-202ENST00000403162 GUCY1A3Q02108 690 aa21.66■■□□□ 1.06
CCDC47-202ENST00000403162 ITGB3BPQ13352 177 aaPredicted RBP21.66■■□□□ 1.06
CCDC47-202ENST00000403162 TRADDQ15628 312 aa21.66■■□□□ 1.06
CCDC47-202ENST00000403162 PTGISQ16647 500 aa21.66■■□□□ 1.06
CCDC47-202ENST00000403162 YTHDF3Q7Z739 585 aaKnown RBP21.66■■□□□ 1.06
CCDC47-202ENST00000403162 GJA10Q969M2 543 aa21.66■■□□□ 1.06
CCDC47-202ENST00000403162 CALR3Q96L12 384 aaKnown RBP21.66■■□□□ 1.06
CCDC47-202ENST00000403162 KCNK3O14649 394 aa21.65■■□□□ 1.06
CCDC47-202ENST00000403162 MEFVO15553 781 aaPredicted RBP21.65■■□□□ 1.06
CCDC47-202ENST00000403162 GUCY2CP25092 1073 aa21.65■■□□□ 1.06
CCDC47-202ENST00000403162 MDH1P40925 334 aaKnown RBP21.65■■□□□ 1.06
CCDC47-202ENST00000403162 PTK2Q05397 1052 aa21.65■■□□□ 1.06
CCDC47-202ENST00000403162 NAA35Q5VZE5 725 aa21.65■■□□□ 1.06
CCDC47-202ENST00000403162 MICALCLQ6ZW33 695 aa21.65■■□□□ 1.06
CCDC47-202ENST00000403162 LRRC57Q8N9N7 239 aa21.65■■□□□ 1.06
CCDC47-202ENST00000403162 DHX36Q9H2U1 1008 aaKnown RBP21.65■■□□□ 1.06
CCDC47-202ENST00000403162 TMBIM4Q9HC24 238 aa21.65■■□□□ 1.06
CCDC47-202ENST00000403162 DDTLA6NHG4 134 aaPredicted RBP21.65■■□□□ 1.06
CCDC47-202ENST00000403162 KIAA0754O94854 1291 aa21.65■■□□□ 1.06
CCDC47-202ENST00000403162 ANXA13P27216 316 aa21.65■■□□□ 1.06
CCDC47-202ENST00000403162 ECHS1P30084 290 aa21.65■■□□□ 1.06
CCDC47-202ENST00000403162 RNASE9P60153 205 aaKnown RBP21.65■■□□□ 1.06
CCDC47-202ENST00000403162 ERVK-9P63128 1117 aa21.65■■□□□ 1.06
CCDC47-202ENST00000403162 DPY19L2Q6NUT2 758 aa21.65■■□□□ 1.06
CCDC47-202ENST00000403162 ZNF571Q7Z3V5 609 aaPredicted RBP21.65■■□□□ 1.06
CCDC47-202ENST00000403162 FRMD5Q7Z6J6 570 aa21.65■■□□□ 1.06
CCDC47-202ENST00000403162 KLHL7Q8IXQ5 586 aa21.65■■□□□ 1.06
CCDC47-202ENST00000403162 CNPY4Q8N129 248 aa21.65■■□□□ 1.06
CCDC47-202ENST00000403162 NPHP3-ACAD11A0A0J9YXS1 232 aa21.64■■□□□ 1.06
CCDC47-202ENST00000403162 POTEB3A0JP26 581 aa21.64■■□□□ 1.06
CCDC47-202ENST00000403162 POTECB2RU33 542 aa21.64■■□□□ 1.06
CCDC47-202ENST00000403162 TTLL1O95922 423 aa21.64■■□□□ 1.06
CCDC47-202ENST00000403162 AKR1B1P15121 316 aa21.64■■□□□ 1.06
CCDC47-202ENST00000403162 POTEBQ6S5H4 581 aa21.64■■□□□ 1.06
CCDC47-202ENST00000403162 SH3BP5LQ7L8J4 393 aa21.64■■□□□ 1.06
CCDC47-202ENST00000403162 KCNMB3Q9NPA1 279 aa21.64■■□□□ 1.06
CCDC47-202ENST00000403162 GGA2Q9UJY4 613 aa21.64■■□□□ 1.06
CCDC47-202ENST00000403162 FSBPO95073 299 aa21.64■■□□□ 1.05
CCDC47-202ENST00000403162 ZBTB48P10074 688 aaPredicted RBP21.64■■□□□ 1.05
CCDC47-202ENST00000403162 NR2F2P24468 414 aa21.64■■□□□ 1.05
CCDC47-202ENST00000403162 PRKCIP41743 596 aa21.64■■□□□ 1.05
CCDC47-202ENST00000403162 SLC12A3P55017 1021 aa21.64■■□□□ 1.05
CCDC47-202ENST00000403162 ENOX2Q16206 610 aaKnown RBP21.64■■□□□ 1.05
CCDC47-202ENST00000403162 CEP85LQ5SZL2 805 aa21.64■■□□□ 1.05
CCDC47-202ENST00000403162 MAATS1Q7Z4T9 603 aa21.64■■□□□ 1.05
CCDC47-202ENST00000403162 ZNF473Q8WTR7 871 aaKnown RBP21.64■■□□□ 1.05
CCDC47-202ENST00000403162 PSTPIP2Q9H939 334 aa21.64■■□□□ 1.05
CCDC47-202ENST00000403162 SERPINB13Q9UIV8 391 aa21.64■■□□□ 1.05
CCDC47-202ENST00000403162 TRAF3IP3Q9Y228 551 aa21.64■■□□□ 1.05
CCDC47-202ENST00000403162 GOLGA6L10A6NI86 522 aa21.63■■□□□ 1.05
CCDC47-202ENST00000403162 ZBTB5O15062 677 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms