RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 CYP26B1Q9NR63 512 aa8.41□□□□□ -1.06
USP16-204ENST00000399976 CCDC39Q9UFE4 941 aa8.41□□□□□ -1.06
USP16-204ENST00000399976 ODF2LQ9ULJ1 636 aa8.41□□□□□ -1.06
USP16-204ENST00000399976 B4GALT4O60513 344 aa8.41□□□□□ -1.06
USP16-204ENST00000399976 YWHABP31946 246 aaKnown RBP8.41□□□□□ -1.06
USP16-204ENST00000399976 TXKP42681 527 aa8.41□□□□□ -1.06
USP16-204ENST00000399976 PPIGQ13427 754 aaKnown RBP eCLIP8.41□□□□□ -1.06
USP16-204ENST00000399976 PTGISQ16647 500 aa8.41□□□□□ -1.06
USP16-204ENST00000399976 RESP18Q5W5W9 173 aa8.41□□□□□ -1.06
USP16-204ENST00000399976 GDF6Q6KF10 455 aaPredicted RBP8.41□□□□□ -1.06
USP16-204ENST00000399976 MFSD5Q6N075 450 aa8.41□□□□□ -1.06
USP16-204ENST00000399976 CALML4Q96GE6 196 aa8.41□□□□□ -1.06
USP16-204ENST00000399976 HDAC6Q9UBN7 1215 aa8.41□□□□□ -1.06
USP16-204ENST00000399976 DDX49Q9Y6V7 483 aaKnown RBP8.41□□□□□ -1.06
USP16-204ENST00000399976 CARNS1A5YM72 827 aa8.4□□□□□ -1.06
USP16-204ENST00000399976 H0YCG3 227 aa8.4□□□□□ -1.06
USP16-204ENST00000399976 ZNF286BP0CG31 522 aa8.4□□□□□ -1.06
USP16-204ENST00000399976 CMA1P23946 247 aa8.4□□□□□ -1.06
USP16-204ENST00000399976 TMOD1P28289 359 aa8.4□□□□□ -1.06
USP16-204ENST00000399976 RARRES1P49788 294 aa8.4□□□□□ -1.06
USP16-204ENST00000399976 MLLT1Q03111 559 aaPredicted RBP8.4□□□□□ -1.06
USP16-204ENST00000399976 MXD4Q14582 209 aaPredicted RBP8.4□□□□□ -1.06
USP16-204ENST00000399976 TRIM60Q495X7 471 aa8.4□□□□□ -1.06
USP16-204ENST00000399976 AXDND1Q5T1B0 1012 aaPredicted RBP8.4□□□□□ -1.06
USP16-204ENST00000399976 CCDC73Q6ZRK6 1079 aa8.4□□□□□ -1.06
USP16-204ENST00000399976 CATSPER3Q86XQ3 398 aa8.4□□□□□ -1.06
USP16-204ENST00000399976 SYT2Q8N9I0 419 aaPredicted RBP8.4□□□□□ -1.06
USP16-204ENST00000399976 CCDC51Q96ER9 411 aa8.4□□□□□ -1.06
USP16-204ENST00000399976 ST6GALNAC4Q9H4F1 302 aa8.4□□□□□ -1.06
USP16-204ENST00000399976 TUBE1Q9UJT0 475 aa8.4□□□□□ -1.06
USP16-204ENST00000399976 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.4□□□□□ -1.06
USP16-204ENST00000399976 CLIC4Q9Y696 253 aa8.4□□□□□ -1.06
USP16-204ENST00000399976 BACH1O14867 736 aa8.4□□□□□ -1.06
USP16-204ENST00000399976 INSRRP14616 1297 aa8.4□□□□□ -1.06
USP16-204ENST00000399976 SELPP16109 830 aa8.4□□□□□ -1.06
USP16-204ENST00000399976 SOX10P56693 466 aa8.4□□□□□ -1.06
USP16-204ENST00000399976 STK38Q15208 465 aa8.4□□□□□ -1.06
USP16-204ENST00000399976 FAM187BQ17R55 369 aa8.4□□□□□ -1.06
USP16-204ENST00000399976 RASIP1Q5U651 963 aa8.4□□□□□ -1.06
USP16-204ENST00000399976 NCAPH2Q6IBW4 605 aa8.4□□□□□ -1.06
USP16-204ENST00000399976 ANO5Q75V66 913 aa8.4□□□□□ -1.06
USP16-204ENST00000399976 RPUSD2Q8IZ73 545 aaKnown RBP8.4□□□□□ -1.06
USP16-204ENST00000399976 TMEM174Q8WUU8 243 aa8.4□□□□□ -1.06
USP16-204ENST00000399976 KIFAP3Q92845 792 aa8.4□□□□□ -1.06
USP16-204ENST00000399976 HVCN1Q96D96 273 aa8.4□□□□□ -1.06
USP16-204ENST00000399976 DYDC2Q96IM9 177 aa8.4□□□□□ -1.06
USP16-204ENST00000399976 RNPEPQ9H4A4 650 aa8.4□□□□□ -1.06
USP16-204ENST00000399976 BCAS3Q9H6U6 928 aa8.4□□□□□ -1.06
USP16-204ENST00000399976 HPSEQ9Y251 543 aa8.4□□□□□ -1.06
USP16-204ENST00000399976 ARL2P36404 184 aa8.4□□□□□ -1.07
USP16-204ENST00000399976 TECP42680 631 aa8.4□□□□□ -1.07
USP16-204ENST00000399976 ZNF131P52739 623 aa8.4□□□□□ -1.07
USP16-204ENST00000399976 POU5F1Q01860 360 aaKnown RBP8.4□□□□□ -1.07
USP16-204ENST00000399976 TLE2Q04725 743 aa8.4□□□□□ -1.07
USP16-204ENST00000399976 PPP2R5AQ15172 486 aa8.4□□□□□ -1.07
USP16-204ENST00000399976 UGCGQ16739 394 aa8.4□□□□□ -1.07
USP16-204ENST00000399976 CDCA2Q69YH5 1023 aaPredicted RBP8.4□□□□□ -1.07
USP16-204ENST00000399976 PSRC1Q6PGN9 363 aaPredicted RBP8.4□□□□□ -1.07
USP16-204ENST00000399976 PPP4R3CPQ6ZMV5 832 aa8.4□□□□□ -1.07
USP16-204ENST00000399976 TMEM199Q8N511 208 aa8.4□□□□□ -1.07
USP16-204ENST00000399976 DHX38Q92620 1227 aaKnown RBP8.4□□□□□ -1.07
USP16-204ENST00000399976 TIGD1Q96MW7 591 aa8.4□□□□□ -1.07
USP16-204ENST00000399976 INO80BQ9C086 356 aaPredicted RBP8.4□□□□□ -1.07
USP16-204ENST00000399976 TNMDQ9H2S6 317 aa8.4□□□□□ -1.07
USP16-204ENST00000399976 ATP6V0A4Q9HBG4 840 aa8.4□□□□□ -1.07
USP16-204ENST00000399976 SEL1LQ9UBV2 794 aa8.4□□□□□ -1.07
USP16-204ENST00000399976 SCN5AQ14524 2016 aa8.39□□□□□ -1.07
USP16-204ENST00000399976 HTTP42858 3142 aa8.39□□□□□ -1.07
USP16-204ENST00000399976 EVI5O60447 810 aa8.39□□□□□ -1.07
USP16-204ENST00000399976 MED24O75448 989 aa8.39□□□□□ -1.07
USP16-204ENST00000399976 CYP11B2P19099 503 aa8.39□□□□□ -1.07
USP16-204ENST00000399976 AXLP30530 894 aa8.39□□□□□ -1.07
USP16-204ENST00000399976 DNM2P50570 870 aa8.39□□□□□ -1.07
USP16-204ENST00000399976 CRYBB1P53674 252 aaPredicted RBP8.39□□□□□ -1.07
USP16-204ENST00000399976 MRPS6P82932 125 aaKnown RBP8.39□□□□□ -1.07
USP16-204ENST00000399976 GRB10Q13322 594 aa8.39□□□□□ -1.07
USP16-204ENST00000399976 ALCAMQ13740 583 aa8.39□□□□□ -1.07
USP16-204ENST00000399976 ECM1Q16610 540 aa8.39□□□□□ -1.07
USP16-204ENST00000399976 SRGAP1Q7Z6B7 1085 aa8.39□□□□□ -1.07
USP16-204ENST00000399976 CABP7Q86V35 215 aa8.39□□□□□ -1.07
USP16-204ENST00000399976 SNX29Q8TEQ0 813 aa8.39□□□□□ -1.07
USP16-204ENST00000399976 LEO1Q8WVC0 666 aaPredicted RBP8.39□□□□□ -1.07
USP16-204ENST00000399976 SPIRE2Q8WWL2 714 aa8.39□□□□□ -1.07
USP16-204ENST00000399976 PNMA5Q96PV4 448 aa8.39□□□□□ -1.07
USP16-204ENST00000399976 NTPCRQ9BSD7 190 aaKnown RBP8.39□□□□□ -1.07
USP16-204ENST00000399976 FTHL17Q9BXU8 183 aa8.39□□□□□ -1.07
USP16-204ENST00000399976 DNM3Q9UQ16 869 aa8.39□□□□□ -1.07
USP16-204ENST00000399976 TRPV2Q9Y5S1 764 aa8.39□□□□□ -1.07
USP16-204ENST00000399976 FRMD3A2A2Y4 597 aa8.39□□□□□ -1.07
USP16-204ENST00000399976 CCT6AP40227 531 aaKnown RBP8.39□□□□□ -1.07
USP16-204ENST00000399976 SLC7A3Q8WY07 619 aa8.39□□□□□ -1.07
USP16-204ENST00000399976 C2orf40Q9H1Z8 148 aa8.39□□□□□ -1.07
USP16-204ENST00000399976 IL23AQ9NPF7 189 aa8.39□□□□□ -1.07
USP16-204ENST00000399976 CHST12Q9NRB3 414 aa8.39□□□□□ -1.07
USP16-204ENST00000399976 TRPC6Q9Y210 931 aa8.39□□□□□ -1.07
USP16-204ENST00000399976 SAMM50Q9Y512 469 aa8.39□□□□□ -1.07
USP16-204ENST00000399976 GBF1Q92538 1859 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 UBE4BO95155 1302 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 TMEM265A0A087WTH1 108 aa8.38□□□□□ -1.07
USP16-204ENST00000399976 POTEMA6NI47 508 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms