RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 KRT37O76014 449 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 NEK2P51955 445 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 FKBP3Q00688 224 aaKnown RBP13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 SMYD4Q8IYR2 804 aaPredicted RBP13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 ARHGEF1Q92888 912 aaKnown RBP13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 EEF2KMTQ96G04 330 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 SAYSD1Q9NPB0 183 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 SLFN14P0C7P3 912 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 EIF4A3P38919 411 aaKnown RBP13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 EFTUD2Q15029 972 aaKnown RBP eCLIP13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 TSC22D3Q99576 134 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 EMILIN3Q9NT22 766 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 A0A0G2JND7 137 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 E5RI56 91 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 GYG2O15488 501 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 ZC3H18Q86VM9 953 aaKnown RBP13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 RASGRP4Q8TDF6 673 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 ABHD8Q96I13 439 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 SMYD3Q9H7B4 428 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 LEMD3Q9Y2U8 911 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 SLC4A7Q9Y6M7 1214 aa13.18□□□□□ -0.3
CACNA1C-219ENST00000399649 BMP3P12645 472 aa13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 MARK3P27448 753 aa13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 ARL4CP56559 192 aa13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 UBE3CQ15386 1083 aa13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 RAPGEF5Q92565 580 aa13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 GCOM2Q9BZD3 368 aaPredicted RBP13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 PPARGC1AQ9UBK2 798 aaKnown RBP13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 DPYSL4O14531 572 aa13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 SERPINI2O75830 405 aa13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 PCCAP05165 728 aaPredicted RBP13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 ZNF772Q68DY9 489 aaPredicted RBP13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 MAGEB5Q9BZ81 275 aa13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 IKBKBO14920 756 aa13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 CTIFO43310 598 aaKnown RBP13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 MYO1DO94832 1006 aa13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 GDF11O95390 407 aa13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 SLC16A2P36021 539 aa13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 CCDC90BQ9GZT6 254 aa13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 SOWAHDA6NJG2 315 aa13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 PRPF4O43172 522 aaKnown RBP eCLIP13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 ACSL3O95573 720 aa13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 LDHAP00338 332 aaKnown RBP13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 PLA2G4BP0C869 781 aa13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 RXRBP28702 533 aa13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 MED21Q13503 144 aa13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 ARHGEF25Q86VW2 580 aa13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 PDCD6IPQ8WUM4 868 aaKnown RBP13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 ZNF496Q96IT1 587 aaPredicted RBP13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 NEMP1O14524 444 aa13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 KITP10721 976 aa13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 DDX5P17844 614 aaKnown RBP13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 SLC7A5Q01650 507 aa13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 GRIN1Q05586 938 aa13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 PIGSQ96S52 555 aa13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 CARD14Q9BXL6 1004 aa13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 PITPNM3Q9BZ71 974 aa13.17□□□□□ -0.3
CACNA1C-219ENST00000399649 VCPP55072 806 aaKnown RBP13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 CCDC85BQ15834 202 aaPredicted RBP13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 LRRC24Q50LG9 513 aa13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 ZFP69BQ9UJL9 534 aa13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 CCDC151A5D8V7 595 aa13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 SLC39A14Q15043 492 aa13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 NLRP4Q96MN2 994 aa13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 UBN2Q6ZU65 1347 aa13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 KIAA0556O60303 1618 aa13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 ATP5HO75947 161 aa13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 PDXDC2PQ6P474 469 aa13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 TTC23LQ6PF05 361 aa13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 CALR3Q96L12 384 aaKnown RBP13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 ASNSD1Q9NWL6 643 aa13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 PODXLO00592 558 aa13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 ANKS3Q6ZW76 656 aa13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 DYDC2Q96IM9 177 aa13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 DNAJC17Q9NVM6 304 aaKnown RBP13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 GOLGA8IPA6NC78 632 aa13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 GOLGA8JA6NMD2 632 aa13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 SMARCA1P28370 1054 aa13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 NNMTP40261 264 aa13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 TNFAIP2Q03169 654 aa13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 MORF4L2Q15014 288 aa13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 PPP4R3CPQ6ZMV5 832 aa13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 EEPD1Q7L9B9 569 aa13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 ZNF467Q7Z7K2 595 aaPredicted RBP13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 RHOT2Q8IXI1 618 aa13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 URGCPQ8TCY9 931 aa13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 KANSL2Q9H9L4 492 aa13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 NOP53Q9NZM5 478 aaKnown RBP13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 SEL1LQ9UBV2 794 aa13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 PYCARDQ9ULZ3 195 aa13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 FAM135BQ49AJ0 1406 aa13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 YEATS2Q9ULM3 1422 aa13.16□□□□□ -0.3
CACNA1C-219ENST00000399649 ZSCAN9O15535 394 aaPredicted RBP13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 KIAA0232Q92628 1395 aa13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 OTUB1Q96FW1 271 aaPredicted RBP13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 SARS2Q9NP81 518 aaKnown RBP13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 C1orf146Q5VVC0 180 aa13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 NUGGCQ68CJ6 796 aa13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 LRRC31Q6UY01 552 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms