RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 PRPF4BQ13523 1007 aaKnown RBP21.33■■□□□ 1
COL13A1-205ENST00000398978 FBXW10Q5XX13 1052 aa21.33■■□□□ 1
COL13A1-205ENST00000398978 TRMT1LQ7Z2T5 733 aaKnown RBP21.33■■□□□ 1
COL13A1-205ENST00000398978 TPCN2Q8NHX9 752 aa21.33■■□□□ 1
COL13A1-205ENST00000398978 KAT2BQ92831 832 aa21.33■■□□□ 1
COL13A1-205ENST00000398978 SLC35C1Q96A29 364 aa21.33■■□□□ 1
COL13A1-205ENST00000398978 RNF14Q9UBS8 474 aa21.33■■□□□ 1
COL13A1-205ENST00000398978 TAF1LQ8IZX4 1826 aa21.33■■□□□ 1
COL13A1-205ENST00000398978 ECHS1P30084 290 aa21.32■■□□□ 1
COL13A1-205ENST00000398978 SH3BP5LQ7L8J4 393 aa21.32■■□□□ 1
COL13A1-205ENST00000398978 GLYCTKQ8IVS8 523 aa21.32■■□□□ 1
COL13A1-205ENST00000398978 PLCD3Q8N3E9 789 aa21.32■■□□□ 1
COL13A1-205ENST00000398978 LRRC57Q8N9N7 239 aa21.32■■□□□ 1
COL13A1-205ENST00000398978 CHORDC1Q9UHD1 332 aaPredicted RBP21.32■■□□□ 1
COL13A1-205ENST00000398978 POLRMTO00411 1230 aaKnown RBP21.32■■□□□ 1
COL13A1-205ENST00000398978 KRIT1O00522 736 aa21.32■■□□□ 1
COL13A1-205ENST00000398978 DAPK3O43293 454 aa21.32■■□□□ 1
COL13A1-205ENST00000398978 TRIM49P0CI25 452 aa21.32■■□□□ 1
COL13A1-205ENST00000398978 TRIM49CP0CI26 452 aa21.32■■□□□ 1
COL13A1-205ENST00000398978 PAXIP1Q6ZW49 1069 aaPredicted RBP21.32■■□□□ 1
COL13A1-205ENST00000398978 SLFN12Q8IYM2 578 aa21.32■■□□□ 1
COL13A1-205ENST00000398978 PPM1EQ8WY54 764 aa21.32■■□□□ 1
COL13A1-205ENST00000398978 TBCAO75347 108 aaKnown RBP21.32■■□□□ 1
COL13A1-205ENST00000398978 RPA1P27694 616 aa21.32■■□□□ 1
COL13A1-205ENST00000398978 LSP1P33241 339 aa21.32■■□□□ 1
COL13A1-205ENST00000398978 HSD17B3P37058 310 aa21.32■■□□□ 1
COL13A1-205ENST00000398978 GBP6Q6ZN66 633 aa21.32■■□□□ 1
COL13A1-205ENST00000398978 MAEAQ7L5Y9 396 aa21.32■■□□□ 1
COL13A1-205ENST00000398978 FRMD5Q7Z6J6 570 aa21.32■■□□□ 1
COL13A1-205ENST00000398978 RUBCNQ92622 972 aa21.32■■□□□ 1
COL13A1-205ENST00000398978 EIF2AK1Q9BQI3 630 aaKnown RBP21.32■■□□□ 1
COL13A1-205ENST00000398978 TAF1DQ9H5J8 278 aaPredicted RBP21.32■■□□□ 1
COL13A1-205ENST00000398978 PPANQ9NQ55 473 aaKnown RBP21.32■■□□□ 1
COL13A1-205ENST00000398978 TRAF3IP3Q9Y228 551 aa21.32■■□□□ 1
COL13A1-205ENST00000398978 TTI1O43156 1089 aa21.31■■□□□ 1
COL13A1-205ENST00000398978 CYP2J2P51589 502 aa21.31■■□□□ 1
COL13A1-205ENST00000398978 SF3A3Q12874 501 aaKnown RBP eCLIP21.31■■□□□ 1
COL13A1-205ENST00000398978 UAP1Q16222 522 aaPredicted RBP21.31■■□□□ 1
COL13A1-205ENST00000398978 MYCT1Q8N699 235 aa21.31■■□□□ 1
COL13A1-205ENST00000398978 UBLCP1Q8WVY7 318 aaPredicted RBP21.31■■□□□ 1
COL13A1-205ENST00000398978 SKOR1P84550 965 aa21.31■■□□□ 1
COL13A1-205ENST00000398978 FBXO11Q86XK2 927 aa21.31■■□□□ 1
COL13A1-205ENST00000398978 TGFB1I1O43294 461 aa21.3■■□□□ 1
COL13A1-205ENST00000398978 CALUO43852 315 aaPredicted RBP21.3■■□□□ 1
COL13A1-205ENST00000398978 LRRN2O75325 713 aa21.3■■□□□ 1
COL13A1-205ENST00000398978 NDUFB10O96000 172 aa21.3■■□□□ 1
COL13A1-205ENST00000398978 ARHGAP44Q17R89 818 aa21.3■■□□□ 1
COL13A1-205ENST00000398978 EPM2AIP1Q7L775 607 aaPredicted RBP21.3■■□□□ 1
COL13A1-205ENST00000398978 ZC3H3Q8IXZ2 948 aaKnown RBP21.3■■□□□ 1
COL13A1-205ENST00000398978 EFCAB13Q8IY85 973 aa21.3■■□□□ 1
COL13A1-205ENST00000398978 ERMNQ8TAM6 284 aa21.3■■□□□ 1
COL13A1-205ENST00000398978 LNX1Q8TBB1 728 aaPredicted RBP21.3■■□□□ 1
COL13A1-205ENST00000398978 AMNQ9BXJ7 453 aa21.3■■□□□ 1
COL13A1-205ENST00000398978 TMEM59LQ9UK28 342 aa21.3■■□□□ 1
COL13A1-205ENST00000398978 RABGAP1Q9Y3P9 1069 aa21.3■■□□□ 1
COL13A1-205ENST00000398978 PITPNM2Q9BZ72 1349 aa21.3■■□□□ 1
COL13A1-205ENST00000398978 IGSF9BQ9UPX0 1349 aa21.3■■□□□ 1
COL13A1-205ENST00000398978 CYP3A7-CYP3A51PA0A087WV96 503 aa21.3■■□□□ 1
COL13A1-205ENST00000398978 CYP3A7P24462 503 aa21.3■■□□□ 1
COL13A1-205ENST00000398978 HOXA10P31260 410 aaPredicted RBP21.3■■□□□ 1
COL13A1-205ENST00000398978 GALCP54803 685 aa21.3■■□□□ 1
COL13A1-205ENST00000398978 ZNF211Q13398 564 aaPredicted RBP21.3■■□□□ 1
COL13A1-205ENST00000398978 SP8Q8IXZ3 490 aa21.3■■□□□ 1
COL13A1-205ENST00000398978 TRIM51Q9BSJ1 452 aa21.3■■□□□ 1
COL13A1-205ENST00000398978 OPLAHO14841 1288 aa21.3■■□□□ 1
COL13A1-205ENST00000398978 EVI5O60447 810 aa21.3■■□□□ 1
COL13A1-205ENST00000398978 H2AFZP0C0S5 128 aa21.3■■□□□ 1
COL13A1-205ENST00000398978 TMOD1P28289 359 aa21.3■■□□□ 1
COL13A1-205ENST00000398978 FOXR2Q6PJQ5 311 aa21.3■■□□□ 1
COL13A1-205ENST00000398978 PPP4R3CPQ6ZMV5 832 aa21.3■■□□□ 1
COL13A1-205ENST00000398978 H2AFVQ71UI9 128 aa21.3■■□□□ 1
COL13A1-205ENST00000398978 PALB2Q86YC2 1186 aa21.3■■□□□ 1
COL13A1-205ENST00000398978 ATP6V1G3Q96LB4 118 aa21.3■■□□□ 1
COL13A1-205ENST00000398978 FAM198AQ9UFP1 575 aa21.3■■□□□ 1
COL13A1-205ENST00000398978 FLOT1O75955 427 aa21.29■■□□□ 1
COL13A1-205ENST00000398978 TBC1D10BQ4KMP7 808 aaPredicted RBP21.29■■□□□ 1
COL13A1-205ENST00000398978 SCFD2Q8WU76 684 aa21.29■■□□□ 1
COL13A1-205ENST00000398978 CRAMP1Q96RY5 1269 aa21.29■■□□□ 1
COL13A1-205ENST00000398978 TAS2R14Q9NYV8 317 aa21.29■■□□□ 1
COL13A1-205ENST00000398978 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.29■■□□□ 1
COL13A1-205ENST00000398978 FBXL5Q9UKA1 691 aa21.29■■□□□ 1
COL13A1-205ENST00000398978 A0A087WUV0 522 aaPredicted RBP21.29■■□□□ 1
COL13A1-205ENST00000398978 DCDC2CA8MYV0 355 aa21.29■■□□□ 1
COL13A1-205ENST00000398978 ERLIN2O94905 339 aa21.29■■□□□ 1
COL13A1-205ENST00000398978 CFBP00751 764 aa21.29■■□□□ 1
COL13A1-205ENST00000398978 CTNNA1P35221 906 aaKnown RBP21.29■■□□□ 1
COL13A1-205ENST00000398978 HDLBPQ00341 1268 aaKnown RBP21.29■■□□□ 1
COL13A1-205ENST00000398978 RINT1Q6NUQ1 792 aa21.29■■□□□ 1
COL13A1-205ENST00000398978 AADACL2Q6P093 401 aa21.29■■□□□ 1
COL13A1-205ENST00000398978 CRYGNQ8WXF5 182 aa21.29■■□□□ 1
COL13A1-205ENST00000398978 DYDC2Q96IM9 177 aa21.29■■□□□ 1
COL13A1-205ENST00000398978 TYW1Q9NV66 732 aaKnown RBP21.29■■□□□ 1
COL13A1-205ENST00000398978 PKD2L1Q9P0L9 805 aa21.29■■□□□ 1
COL13A1-205ENST00000398978 FOCADQ5VW36 1801 aa21.29■■□□□ 1
COL13A1-205ENST00000398978 UTRNP46939 3433 aa21.29■■□□□ 1
COL13A1-205ENST00000398978 PGRMC1O00264 195 aaKnown RBP21.28■■□□□ 1
COL13A1-205ENST00000398978 PDXKO00764 312 aa21.28■■□□□ 1
COL13A1-205ENST00000398978 ISCUQ9H1K1 167 aa21.28■■□□□ 1
COL13A1-205ENST00000398978 PLCB1Q9NQ66 1216 aa21.28■■□□□ 1
COL13A1-205ENST00000398978 VAV3Q9UKW4 847 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms