RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 IFI16Q16666 785 aaKnown RBP27.96■■■□□ 2.07
COL13A1-203ENST00000398969 BMT2Q1RMZ1 405 aa27.96■■■□□ 2.07
COL13A1-203ENST00000398969 TUBB8Q3ZCM7 444 aa27.96■■■□□ 2.07
COL13A1-203ENST00000398969 PBKQ96KB5 322 aa27.96■■■□□ 2.07
COL13A1-203ENST00000398969 AMNQ9BXJ7 453 aa27.96■■■□□ 2.07
COL13A1-203ENST00000398969 GOLPH3Q9H4A6 298 aa27.96■■■□□ 2.07
COL13A1-203ENST00000398969 TYW1Q9NV66 732 aaKnown RBP27.96■■■□□ 2.07
COL13A1-203ENST00000398969 SIPA1L1O43166 1804 aa27.96■■■□□ 2.07
COL13A1-203ENST00000398969 ASTN1O14525 1302 aa27.96■■■□□ 2.07
COL13A1-203ENST00000398969 SHTN1A0MZ66 631 aa27.95■■■□□ 2.07
COL13A1-203ENST00000398969 C21orf2O43822 256 aa27.95■■■□□ 2.07
COL13A1-203ENST00000398969 NR3C1P04150 777 aa27.95■■■□□ 2.07
COL13A1-203ENST00000398969 SNAP25P60880 206 aa27.95■■■□□ 2.07
COL13A1-203ENST00000398969 ALKBH5Q6P6C2 394 aaKnown RBP27.95■■■□□ 2.07
COL13A1-203ENST00000398969 EFCAB13Q8IY85 973 aa27.95■■■□□ 2.07
COL13A1-203ENST00000398969 RABEP2Q9H5N1 569 aa27.95■■■□□ 2.07
COL13A1-203ENST00000398969 SIX2Q9NPC8 291 aa27.95■■■□□ 2.07
COL13A1-203ENST00000398969 NENFQ9UMX5 172 aa27.95■■■□□ 2.07
COL13A1-203ENST00000398969 RSPH10B2B2RC85 870 aa27.95■■■□□ 2.06
COL13A1-203ENST00000398969 EBAG9O00559 213 aa27.95■■■□□ 2.06
COL13A1-203ENST00000398969 RSPH10BP0C881 870 aa27.95■■■□□ 2.06
COL13A1-203ENST00000398969 NOP2P46087 812 aaKnown RBP27.95■■■□□ 2.06
COL13A1-203ENST00000398969 HDLBPQ00341 1268 aaKnown RBP27.95■■■□□ 2.06
COL13A1-203ENST00000398969 MCTP2Q6DN12 878 aa27.95■■■□□ 2.06
COL13A1-203ENST00000398969 DNAAF5Q86Y56 855 aa27.95■■■□□ 2.06
COL13A1-203ENST00000398969 SUPT20HQ8NEM7 779 aa27.95■■■□□ 2.06
COL13A1-203ENST00000398969 PPM1EQ8WY54 764 aa27.95■■■□□ 2.06
COL13A1-203ENST00000398969 FAM107BQ9H098 131 aa27.95■■■□□ 2.06
COL13A1-203ENST00000398969 FBXL5Q9UKA1 691 aa27.95■■■□□ 2.06
COL13A1-203ENST00000398969 AJAP1Q9UKB5 411 aaPredicted RBP27.95■■■□□ 2.06
COL13A1-203ENST00000398969 ZNF646O15015 1829 aaPredicted RBP27.94■■■□□ 2.06
COL13A1-203ENST00000398969 SLC16A3O15427 465 aaKnown RBP27.94■■■□□ 2.06
COL13A1-203ENST00000398969 SREBF1P36956 1147 aa27.94■■■□□ 2.06
COL13A1-203ENST00000398969 PDCLQ13371 301 aa27.94■■■□□ 2.06
COL13A1-203ENST00000398969 CERKLQ49MI3 558 aaPredicted RBP27.94■■■□□ 2.06
COL13A1-203ENST00000398969 SIAH1Q8IUQ4 282 aa27.94■■■□□ 2.06
COL13A1-203ENST00000398969 ACTRT1Q8TDG2 376 aa27.94■■■□□ 2.06
COL13A1-203ENST00000398969 FBXO41Q8TF61 875 aa27.94■■■□□ 2.06
COL13A1-203ENST00000398969 SCFD2Q8WU76 684 aa27.94■■■□□ 2.06
COL13A1-203ENST00000398969 FAM20AQ96MK3 541 aa27.94■■■□□ 2.06
COL13A1-203ENST00000398969 METTL14Q9HCE5 456 aaKnown RBP27.94■■■□□ 2.06
COL13A1-203ENST00000398969 FLOT1O75955 427 aa27.94■■■□□ 2.06
COL13A1-203ENST00000398969 ANXA13P27216 316 aa27.94■■■□□ 2.06
COL13A1-203ENST00000398969 CASP4P49662 377 aa27.94■■■□□ 2.06
COL13A1-203ENST00000398969 JAM2P57087 298 aa27.94■■■□□ 2.06
COL13A1-203ENST00000398969 KDM7AQ6ZMT4 941 aa27.94■■■□□ 2.06
COL13A1-203ENST00000398969 SLC35C1Q96A29 364 aa27.94■■■□□ 2.06
COL13A1-203ENST00000398969 PCDHAC2Q9Y5I4 1007 aa27.94■■■□□ 2.06
COL13A1-203ENST00000398969 STK24Q9Y6E0 443 aa27.94■■■□□ 2.06
COL13A1-203ENST00000398969 ZBTB48P10074 688 aaPredicted RBP27.93■■■□□ 2.06
COL13A1-203ENST00000398969 RPL13P26373 211 aaKnown RBP27.93■■■□□ 2.06
COL13A1-203ENST00000398969 CACNB3P54284 484 aa27.93■■■□□ 2.06
COL13A1-203ENST00000398969 TCERG1LQ5VWI1 586 aa27.93■■■□□ 2.06
COL13A1-203ENST00000398969 RUSC1Q9BVN2 902 aa27.93■■■□□ 2.06
COL13A1-203ENST00000398969 ISCUQ9H1K1 167 aa27.93■■■□□ 2.06
COL13A1-203ENST00000398969 BHMT2Q9H2M3 363 aa27.93■■■□□ 2.06
COL13A1-203ENST00000398969 TAF1DQ9H5J8 278 aaPredicted RBP27.93■■■□□ 2.06
COL13A1-203ENST00000398969 VAV3Q9UKW4 847 aa27.93■■■□□ 2.06
COL13A1-203ENST00000398969 ATP8B3O60423 1300 aa27.93■■■□□ 2.06
COL13A1-203ENST00000398969 SPDYE3A6NKU9 549 aa27.93■■■□□ 2.06
COL13A1-203ENST00000398969 CEP104O60308 925 aa27.93■■■□□ 2.06
COL13A1-203ENST00000398969 HSPA9P38646 679 aaKnown RBP27.93■■■□□ 2.06
COL13A1-203ENST00000398969 ATP1A2P50993 1020 aa27.93■■■□□ 2.06
COL13A1-203ENST00000398969 ERVK-9P63128 1117 aa27.93■■■□□ 2.06
COL13A1-203ENST00000398969 CYP4A11Q02928 519 aa27.93■■■□□ 2.06
COL13A1-203ENST00000398969 TCP10Q12799 353 aa27.93■■■□□ 2.06
COL13A1-203ENST00000398969 TPCN2Q8NHX9 752 aa27.93■■■□□ 2.06
COL13A1-203ENST00000398969 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP27.93■■■□□ 2.06
COL13A1-203ENST00000398969 BCAS3Q9H6U6 928 aa27.93■■■□□ 2.06
COL13A1-203ENST00000398969 DDTLA6NHG4 134 aaPredicted RBP27.92■■■□□ 2.06
COL13A1-203ENST00000398969 MSH4O15457 936 aa27.92■■■□□ 2.06
COL13A1-203ENST00000398969 USH1GQ495M9 461 aa27.92■■■□□ 2.06
COL13A1-203ENST00000398969 TTLL6Q8N841 843 aa27.92■■■□□ 2.06
COL13A1-203ENST00000398969 EIF1ADQ8N9N8 165 aaKnown RBP27.92■■■□□ 2.06
COL13A1-203ENST00000398969 GCNT3O95395 438 aa27.92■■■□□ 2.06
COL13A1-203ENST00000398969 FOSP01100 380 aaPredicted RBP27.92■■■□□ 2.06
COL13A1-203ENST00000398969 RBM5P52756 815 aaKnown RBP eCLIP27.92■■■□□ 2.06
COL13A1-203ENST00000398969 FBXO11Q86XK2 927 aa27.92■■■□□ 2.06
COL13A1-203ENST00000398969 GCNT4Q9P109 453 aa27.92■■■□□ 2.06
COL13A1-203ENST00000398969 PPIP5K2O43314 1243 aa27.91■■■□□ 2.06
COL13A1-203ENST00000398969 TBCAO75347 108 aaKnown RBP27.91■■■□□ 2.06
COL13A1-203ENST00000398969 ECHS1P30084 290 aa27.91■■■□□ 2.06
COL13A1-203ENST00000398969 CIITAP33076 1130 aa27.91■■■□□ 2.06
COL13A1-203ENST00000398969 MMP14P50281 582 aa27.91■■■□□ 2.06
COL13A1-203ENST00000398969 ICA1Q05084 483 aa27.91■■■□□ 2.06
COL13A1-203ENST00000398969 PTPROQ16827 1216 aa27.91■■■□□ 2.06
COL13A1-203ENST00000398969 EMC10Q5UCC4 262 aa27.91■■■□□ 2.06
COL13A1-203ENST00000398969 PACS2Q86VP3 889 aa27.91■■■□□ 2.06
COL13A1-203ENST00000398969 C1orf131Q8NDD1 294 aaKnown RBP27.91■■■□□ 2.06
COL13A1-203ENST00000398969 FAM169AQ9Y6X4 670 aa27.91■■■□□ 2.06
COL13A1-203ENST00000398969 A0A087WUV0 522 aaPredicted RBP27.9■■■□□ 2.06
COL13A1-203ENST00000398969 F5H6K3 240 aa27.9■■■□□ 2.06
COL13A1-203ENST00000398969 KLRC3Q07444 240 aa27.9■■■□□ 2.06
COL13A1-203ENST00000398969 KCNA1Q09470 495 aa27.9■■■□□ 2.06
COL13A1-203ENST00000398969 TTC31Q49AM3 519 aaPredicted RBP27.9■■■□□ 2.06
COL13A1-203ENST00000398969 METTL13Q8N6R0 699 aa27.9■■■□□ 2.06
COL13A1-203ENST00000398969 CALR3Q96L12 384 aaKnown RBP27.9■■■□□ 2.06
COL13A1-203ENST00000398969 RNPC3Q96LT9 517 aaKnown RBP27.9■■■□□ 2.06
COL13A1-203ENST00000398969 POLD4Q9HCU8 107 aa27.9■■■□□ 2.06
COL13A1-203ENST00000398969 SERPINA10Q9UK55 444 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms