RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 TRIM21P19474 475 aaKnown RBP11.07□□□□□ -0.64
HMGCLL1-205ENST00000398661 DNM2P50570 870 aa11.07□□□□□ -0.64
HMGCLL1-205ENST00000398661 KRT26Q7Z3Y9 468 aa11.07□□□□□ -0.64
HMGCLL1-205ENST00000398661 DGKHQ86XP1 1220 aa11.07□□□□□ -0.64
HMGCLL1-205ENST00000398661 CCDC63Q8NA47 563 aa11.07□□□□□ -0.64
HMGCLL1-205ENST00000398661 TCP11Q8WWU5 503 aa11.07□□□□□ -0.64
HMGCLL1-205ENST00000398661 PIGSQ96S52 555 aa11.07□□□□□ -0.64
HMGCLL1-205ENST00000398661 TAF1DQ9H5J8 278 aaPredicted RBP11.07□□□□□ -0.64
HMGCLL1-205ENST00000398661 ZNF408Q9H9D4 720 aa11.07□□□□□ -0.64
HMGCLL1-205ENST00000398661 FBXO28Q9NVF7 368 aa11.07□□□□□ -0.64
HMGCLL1-205ENST00000398661 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.07□□□□□ -0.64
HMGCLL1-205ENST00000398661 PGAP2Q9UHJ9 254 aa11.07□□□□□ -0.64
HMGCLL1-205ENST00000398661 MAPK8IP1Q9UQF2 711 aa11.07□□□□□ -0.64
HMGCLL1-205ENST00000398661 PCDHA13Q9Y5I0 950 aa11.07□□□□□ -0.64
HMGCLL1-205ENST00000398661 RASSF10A6NK89 507 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 CCT8L1PA6NM43 557 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 TRAF5O00463 557 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 ENTPD3O75355 529 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 TTLL1O95922 423 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 PAEPP09466 180 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 EEF1GP26641 437 aaKnown RBP11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 RAB27AP51159 221 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 RPS6KA3P51812 740 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 CDK17Q00537 523 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 IKQ13123 557 aaPredicted RBP11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 CFAP221Q4G0U5 840 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 TATDN1Q6P1N9 297 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 HEATR3Q7Z4Q2 680 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 CPLX4Q7Z7G2 160 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 TMTC2Q8N394 836 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 CCDC155Q8N6L0 562 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 COA7Q96BR5 231 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 MS4A14Q96JA4 679 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 L3MBTL3Q96JM7 780 aaPredicted RBP11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 CCDC42Q96M95 316 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 IFIH1Q9BYX4 1025 aaKnown RBP11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 VPS33BQ9H267 617 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 L3MBTL1Q9Y468 752 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 CNTNAP5Q8WYK1 1306 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 TRIM49BA6NDI0 452 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 GTPBP6O43824 516 aaPredicted RBP11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 CLTAP09496 248 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 DRD4P21917 467 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 CDC25CP30307 473 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 PRPHP41219 470 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 PRCPP42785 496 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 PPP2R2AP63151 447 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 MAP1SQ66K74 1059 aaPredicted RBP11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 TRIM22Q8IYM9 498 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 RETREG2Q8NC44 543 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 NOC3LQ8WTT2 800 aaKnown RBP11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 YIPF3Q9GZM5 350 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 ZNF287Q9HBT7 754 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 NOP53Q9NZM5 478 aaKnown RBP11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 CNOT8Q9UFF9 292 aaKnown RBP11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 GDAQ9Y2T3 454 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 ARFGEF1Q9Y6D6 1849 aa11.06□□□□□ -0.64
HMGCLL1-205ENST00000398661 PHF20L1A8MW92 1017 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 B4DLN1 442 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 USP17L10C9JJH3 530 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 F5H6K3 240 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 LIN7AO14910 233 aaPredicted RBP11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 GSTA1P08263 222 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 KLK7P49862 253 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 KLRC3Q07444 240 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 BIRC3Q13489 604 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 SNX1Q13596 522 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 THEMIS2Q5TEJ8 643 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 FERMT2Q96AC1 680 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 NDST4Q9H3R1 872 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 EXOC1Q9NV70 894 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 RMND1Q9NWS8 449 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 MAGEC2Q9UBF1 373 aaPredicted RBP11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 FOCADQ5VW36 1801 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 IGKV6D-41A0A0C4DH26 115 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 POTECB2RU33 542 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 H0YGN5 161 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 PLEKP08567 350 aaPredicted RBP11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 PCP11498 1178 aaKnown RBP11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 HSD17B3P37058 310 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 ODF2Q5BJF6 829 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 RUFY4Q6ZNE9 571 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 PNMA8AQ86V59 439 aaPredicted RBP11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 OR2W6PQ8NHA6 318 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 AGAP11Q8TF27 550 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 FAM210AQ96ND0 272 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 WRNIP1Q96S55 665 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 TLR10Q9BXR5 811 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 THAP9Q9H5L6 903 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 RNF14Q9UBS8 474 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 ZBTB21Q9ULJ3 1066 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 NFS1Q9Y697 457 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 PSME4Q14997 1843 aa11.05□□□□□ -0.64
HMGCLL1-205ENST00000398661 AHCYL1O43865 530 aa11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 DEXIO95424 95 aa11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 RPN1P04843 607 aaKnown RBP11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 FESP07332 822 aa11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 RPS12P25398 132 aaKnown RBP11.04□□□□□ -0.64
HMGCLL1-205ENST00000398661 SLC1A4P43007 532 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms