RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 FAM9CQ8IZT9 166 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 RNF10Q8N5U6 811 aaKnown RBP7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 PDCD7Q8N8D1 485 aaKnown RBP7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 LINC00301Q8NCQ3 95 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 MDM1Q8TC05 714 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 TRMT2BQ96GJ1 504 aaKnown RBP7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 TCF12Q99081 682 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 ZCCHC17Q9NP64 241 aaKnown RBP7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 KCNQ5Q9NR82 932 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 ATPIF1Q9UII2 106 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 GOLGA6L9A6NEM1 432 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 USP27XA6NNY8 438 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 EIF3CLB5ME19 914 aaKnown RBP7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 F8W031 263 aaPredicted RBP7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 GNPATO15228 680 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 ZSCAN12O43309 604 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 SERPINC1P01008 464 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 PARP1P09874 1014 aaKnown RBP7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 MORC3Q14149 939 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 PLCB4Q15147 1175 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 KRT71Q3SY84 523 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 ZNF594Q96JF6 807 aaPredicted RBP7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 FNBP1Q96RU3 617 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 EIF3CQ99613 913 aaKnown RBP7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 LACTBL1A8MY62 500 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 EPN2O95208 641 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 CTDNEP1O95476 244 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 POLR3DP05423 398 aaPredicted RBP7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 SERPINB4P48594 390 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 CD83Q01151 205 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 PFKPQ01813 784 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 PLEKHG4Q58EX7 1191 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 NEK5Q6P3R8 708 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 ABRAXAS1Q6UWZ7 409 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 NCOA7Q8NI08 942 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 DCAF5Q96JK2 942 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 GMLQ99445 158 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 PLVAPQ9BX97 442 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 SMYD2Q9NRG4 433 aa7.16□□□□□ -1.26
TM9SF4-202ENST00000398022 LAMB1P07942 1786 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 KLF18A0A0U1RQI7 1052 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 IKBKBO14920 756 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 NBNO60934 754 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 TMCC2O75069 709 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 ZNF202O95125 648 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 SCGB1D2O95969 90 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 NDUFV2P19404 249 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 CMA1P23946 247 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 NDUFA8P51970 172 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 CABP4P57796 275 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 PHEXP78562 749 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 SLC27A3Q5K4L6 730 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 SLC30A9Q6PML9 568 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 ADAMTS19Q8TE59 1207 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 ALS2CR12Q96Q35 445 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 CSRNP2Q9H175 543 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 PCDH18Q9HCL0 1135 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 ATP8A2Q9NTI2 1148 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 NDFIP2Q9NV92 336 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 HNRNPCL2B2RXH8 293 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 EYA2O00167 538 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 MCF2LO15068 1137 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 HNRNPCL1O60812 293 aaKnown RBP7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 BCRP11274 1271 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 SYKP43405 635 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 ROR2Q01974 943 aaKnown RBP7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 FKBP4Q02790 459 aaKnown RBP eCLIP7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 NAA30Q147X3 362 aaPredicted RBP7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 CFAP100Q494V2 611 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 KMT5BQ4FZB7 885 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 NBPF14Q5TI25 921 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 PCNX4Q63HM2 1172 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 CCDC84Q86UT8 332 aaPredicted RBP7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 FBXL16Q8N461 479 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 PPP1R13BQ96KQ4 1090 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 MTMR9Q96QG7 549 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 EIF2AK1Q9BQI3 630 aaKnown RBP7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 GLT8D2Q9H1C3 349 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 POLMQ9NP87 494 aaPredicted RBP7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 ATP11BQ9Y2G3 1177 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 IPPQ9Y573 584 aa7.15□□□□□ -1.26
TM9SF4-202ENST00000398022 SALL1Q9NSC2 1324 aa7.15□□□□□ -1.27
TM9SF4-202ENST00000398022 HTTP42858 3142 aa7.15□□□□□ -1.27
TM9SF4-202ENST00000398022 SYNDIG1LA6NDD5 238 aa7.15□□□□□ -1.27
TM9SF4-202ENST00000398022 PHKG2P15735 406 aa7.15□□□□□ -1.27
TM9SF4-202ENST00000398022 LMOD1P29536 600 aaPredicted RBP7.15□□□□□ -1.27
TM9SF4-202ENST00000398022 ETV3P41162 512 aa7.15□□□□□ -1.27
TM9SF4-202ENST00000398022 NR2C2P49116 596 aa7.15□□□□□ -1.27
TM9SF4-202ENST00000398022 PMS2P54278 862 aa7.15□□□□□ -1.27
TM9SF4-202ENST00000398022 SLC8A3P57103 927 aa7.15□□□□□ -1.27
TM9SF4-202ENST00000398022 FANCCQ00597 558 aa7.15□□□□□ -1.27
TM9SF4-202ENST00000398022 CRY1Q16526 586 aa7.15□□□□□ -1.27
TM9SF4-202ENST00000398022 DPCR1Q3MIW9 517 aa7.15□□□□□ -1.27
TM9SF4-202ENST00000398022 DPY19L2Q6NUT2 758 aa7.15□□□□□ -1.27
TM9SF4-202ENST00000398022 FBXO38Q6PIJ6 1188 aa7.15□□□□□ -1.27
TM9SF4-202ENST00000398022 TRPV6Q9H1D0 765 aa7.15□□□□□ -1.27
TM9SF4-202ENST00000398022 CD93Q9NPY3 652 aa7.15□□□□□ -1.27
TM9SF4-202ENST00000398022 DDX25Q9UHL0 483 aaKnown RBP7.15□□□□□ -1.27
TM9SF4-202ENST00000398022 STRIP2Q9ULQ0 834 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms