RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 RNF26Q9BY78 433 aaPredicted RBP16.2■□□□□ 0.18
SNRNP25-203ENST00000397876 RAPGEFL1Q9UHV5 662 aa16.2■□□□□ 0.18
SNRNP25-203ENST00000397876 MRPL42Q9Y6G3 142 aaKnown RBP16.2■□□□□ 0.18
SNRNP25-203ENST00000397876 LOXHD1Q8IVV2 1947 aa16.19■□□□□ 0.18
SNRNP25-203ENST00000397876 RPS6KA5O75582 802 aa16.19■□□□□ 0.18
SNRNP25-203ENST00000397876 PSAPP07602 524 aa16.19■□□□□ 0.18
SNRNP25-203ENST00000397876 SSTR3P32745 418 aaPredicted RBP16.19■□□□□ 0.18
SNRNP25-203ENST00000397876 NFX1Q12986 1120 aaKnown RBP16.19■□□□□ 0.18
SNRNP25-203ENST00000397876 TMEM266Q2M3C6 531 aa16.19■□□□□ 0.18
SNRNP25-203ENST00000397876 PAN2Q504Q3 1202 aaKnown RBP16.19■□□□□ 0.18
SNRNP25-203ENST00000397876 PRR16Q569H4 304 aa16.19■□□□□ 0.18
SNRNP25-203ENST00000397876 TMEM31Q5JXX7 168 aa16.19■□□□□ 0.18
SNRNP25-203ENST00000397876 CRIPAKQ8N1N5 446 aa16.19■□□□□ 0.18
SNRNP25-203ENST00000397876 BBXQ8WY36 941 aaPredicted RBP16.19■□□□□ 0.18
SNRNP25-203ENST00000397876 P2RX5Q93086 422 aa16.19■□□□□ 0.18
SNRNP25-203ENST00000397876 SLC26A6Q9BXS9 759 aa16.19■□□□□ 0.18
SNRNP25-203ENST00000397876 AGXT2Q9BYV1 514 aa16.19■□□□□ 0.18
SNRNP25-203ENST00000397876 CD320Q9NPF0 282 aa16.19■□□□□ 0.18
SNRNP25-203ENST00000397876 RNF216Q9NWF9 866 aaPredicted RBP16.19■□□□□ 0.18
SNRNP25-203ENST00000397876 PCDHA10Q9Y5I2 948 aa16.19■□□□□ 0.18
SNRNP25-203ENST00000397876 ATG2AQ2TAZ0 1938 aa16.19■□□□□ 0.18
SNRNP25-203ENST00000397876 KIAA1671Q9BY89 1806 aa16.18■□□□□ 0.18
SNRNP25-203ENST00000397876 DENND3A2RUS2 1198 aa16.18■□□□□ 0.18
SNRNP25-203ENST00000397876 ADAMTS3O15072 1205 aa16.18■□□□□ 0.18
SNRNP25-203ENST00000397876 CSPG5O95196 566 aa16.18■□□□□ 0.18
SNRNP25-203ENST00000397876 C22orf31O95567 290 aa16.18■□□□□ 0.18
SNRNP25-203ENST00000397876 IFNAR1P17181 557 aa16.18■□□□□ 0.18
SNRNP25-203ENST00000397876 IBSPP21815 317 aaPredicted RBP16.18■□□□□ 0.18
SNRNP25-203ENST00000397876 CIITAP33076 1130 aa16.18■□□□□ 0.18
SNRNP25-203ENST00000397876 SARSP49591 514 aaKnown RBP16.18■□□□□ 0.18
SNRNP25-203ENST00000397876 NAALADL2Q58DX5 795 aa16.18■□□□□ 0.18
SNRNP25-203ENST00000397876 KIAA0319LQ8IZA0 1049 aa16.18■□□□□ 0.18
SNRNP25-203ENST00000397876 RASGRP4Q8TDF6 673 aa16.18■□□□□ 0.18
SNRNP25-203ENST00000397876 KHSRPQ92945 711 aaKnown RBP eCLIP16.18■□□□□ 0.183e-6■■■■□ 19.6
SNRNP25-203ENST00000397876 PPP2R3CQ969Q6 453 aa16.18■□□□□ 0.18
SNRNP25-203ENST00000397876 FAM167AQ96KS9 214 aa16.18■□□□□ 0.18
SNRNP25-203ENST00000397876 TMX1Q9H3N1 280 aa16.18■□□□□ 0.18
SNRNP25-203ENST00000397876 ERVK-5Q9HDB9 667 aa16.18■□□□□ 0.18
SNRNP25-203ENST00000397876 ALG13Q9NP73 1137 aaKnown RBP16.18■□□□□ 0.18
SNRNP25-203ENST00000397876 PLAGL2Q9UPG8 496 aa16.18■□□□□ 0.18
SNRNP25-203ENST00000397876 CEP131Q9UPN4 1083 aa16.18■□□□□ 0.18
SNRNP25-203ENST00000397876 NOC2LQ9Y3T9 749 aaKnown RBP16.18■□□□□ 0.18
SNRNP25-203ENST00000397876 SAMM50Q9Y512 469 aa16.18■□□□□ 0.18
SNRNP25-203ENST00000397876 MAFBQ9Y5Q3 323 aaPredicted RBP16.18■□□□□ 0.18
SNRNP25-203ENST00000397876 WDR64B1ANS9 1081 aa16.17■□□□□ 0.18
SNRNP25-203ENST00000397876 ZBTB42B2RXF5 422 aa16.17■□□□□ 0.18
SNRNP25-203ENST00000397876 GPR182O15218 404 aa16.17■□□□□ 0.18
SNRNP25-203ENST00000397876 ATP4AP20648 1035 aa16.17■□□□□ 0.18
SNRNP25-203ENST00000397876 HYAL1Q12794 435 aa16.17■□□□□ 0.18
SNRNP25-203ENST00000397876 NTRK3Q16288 839 aa16.17■□□□□ 0.18
SNRNP25-203ENST00000397876 METTL13Q8N6R0 699 aa16.17■□□□□ 0.18
SNRNP25-203ENST00000397876 LRFN3Q9BTN0 628 aa16.17■□□□□ 0.18
SNRNP25-203ENST00000397876 C1orf112Q9NSG2 853 aa16.17■□□□□ 0.18
SNRNP25-203ENST00000397876 VPS54Q9P1Q0 977 aa16.17■□□□□ 0.18
SNRNP25-203ENST00000397876 GABBR1Q9UBS5 961 aa16.17■□□□□ 0.18
SNRNP25-203ENST00000397876 PCDHB7Q9Y5E2 793 aa16.17■□□□□ 0.18
SNRNP25-203ENST00000397876 MYO7AQ13402 2215 aa16.17■□□□□ 0.18
SNRNP25-203ENST00000397876 MYH9P35579 1960 aaKnown RBP16.17■□□□□ 0.18
SNRNP25-203ENST00000397876 PI4K2BG5E9Z4 385 aa16.16■□□□□ 0.18
SNRNP25-203ENST00000397876 MGEA5O60502 916 aa16.16■□□□□ 0.18
SNRNP25-203ENST00000397876 PPFIA3O75145 1194 aa16.16■□□□□ 0.18
SNRNP25-203ENST00000397876 ITGB1P05556 798 aa16.16■□□□□ 0.18
SNRNP25-203ENST00000397876 PDIA3P30101 505 aaKnown RBP16.16■□□□□ 0.18
SNRNP25-203ENST00000397876 CRYBB1P53674 252 aaPredicted RBP16.16■□□□□ 0.18
SNRNP25-203ENST00000397876 CCT2P78371 535 aaKnown RBP16.16■□□□□ 0.18
SNRNP25-203ENST00000397876 KIZQ2M2Z5 673 aa16.16■□□□□ 0.18
SNRNP25-203ENST00000397876 CTC1Q2NKJ3 1217 aa16.16■□□□□ 0.18
SNRNP25-203ENST00000397876 TRMT1LQ7Z2T5 733 aaKnown RBP16.16■□□□□ 0.18
SNRNP25-203ENST00000397876 TRIM22Q8IYM9 498 aa16.16■□□□□ 0.18
SNRNP25-203ENST00000397876 TMEM40Q8WWA1 233 aa16.16■□□□□ 0.18
SNRNP25-203ENST00000397876 LENG9Q96B70 501 aa16.16■□□□□ 0.18
SNRNP25-203ENST00000397876 PPP1R16BQ96T49 567 aa16.16■□□□□ 0.18
SNRNP25-203ENST00000397876 OSMRQ99650 979 aa16.16■□□□□ 0.18
SNRNP25-203ENST00000397876 ADAM2Q99965 735 aa16.16■□□□□ 0.18
SNRNP25-203ENST00000397876 CDHR5Q9HBB8 845 aa16.16■□□□□ 0.18
SNRNP25-203ENST00000397876 NCOA5Q9HCD5 579 aaKnown RBP16.16■□□□□ 0.18
SNRNP25-203ENST00000397876 SH3GLB2Q9NR46 395 aa16.16■□□□□ 0.18
SNRNP25-203ENST00000397876 PRKAG3Q9UGI9 489 aa16.16■□□□□ 0.18
SNRNP25-203ENST00000397876 ST3GAL5Q9UNP4 418 aa16.16■□□□□ 0.18
SNRNP25-203ENST00000397876 HCN4Q9Y3Q4 1203 aa16.16■□□□□ 0.18
SNRNP25-203ENST00000397876 MAGEB2O15479 319 aa16.15■□□□□ 0.18
SNRNP25-203ENST00000397876 EPB41L2O43491 1005 aaKnown RBP16.15■□□□□ 0.18
SNRNP25-203ENST00000397876 GPR37L1O60883 481 aa16.15■□□□□ 0.18
SNRNP25-203ENST00000397876 VTNP04004 478 aa16.15■□□□□ 0.18
SNRNP25-203ENST00000397876 LTBRP36941 435 aa16.15■□□□□ 0.18
SNRNP25-203ENST00000397876 GATMP50440 423 aa16.15■□□□□ 0.18
SNRNP25-203ENST00000397876 EVCP57679 992 aa16.15■□□□□ 0.18
SNRNP25-203ENST00000397876 NLRP5P59047 1200 aa16.15■□□□□ 0.18
SNRNP25-203ENST00000397876 SPOUT1Q5T280 376 aaKnown RBP16.15■□□□□ 0.18
SNRNP25-203ENST00000397876 SLC24A5Q71RS6 500 aa16.15■□□□□ 0.18
SNRNP25-203ENST00000397876 RUFY3Q7L099 469 aa16.15■□□□□ 0.18
SNRNP25-203ENST00000397876 KLHL23Q8NBE8 558 aa16.15■□□□□ 0.18
SNRNP25-203ENST00000397876 MAP7D2Q96T17 732 aa16.15■□□□□ 0.18
SNRNP25-203ENST00000397876 C22orf23Q9BZE7 217 aa16.15■□□□□ 0.18
SNRNP25-203ENST00000397876 IGFLR1Q9H665 355 aa16.15■□□□□ 0.18
SNRNP25-203ENST00000397876 AAASQ9NRG9 546 aa16.15■□□□□ 0.18
SNRNP25-203ENST00000397876 RGS18Q9NS28 235 aa16.15■□□□□ 0.18
SNRNP25-203ENST00000397876 EVPLQ92817 2033 aa16.14■□□□□ 0.17
SNRNP25-203ENST00000397876 FAM86C2PA6NEL3 165 aa16.14■□□□□ 0.17
SNRNP25-203ENST00000397876 TBKBP1A7MCY6 615 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms