RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 PGBD1Q96JS3 809 aa13.6□□□□□ -0.23
SYNE4-203ENST00000397428 NEK1Q96PY6 1258 aa13.6□□□□□ -0.23
SYNE4-203ENST00000397428 ANO3Q9BYT9 981 aa13.6□□□□□ -0.23
SYNE4-203ENST00000397428 GLT8D2Q9H1C3 349 aa13.6□□□□□ -0.23
SYNE4-203ENST00000397428 RNF216Q9NWF9 866 aaPredicted RBP13.6□□□□□ -0.23
SYNE4-203ENST00000397428 BARHL2Q9NY43 387 aa13.6□□□□□ -0.23
SYNE4-203ENST00000397428 MUTYHQ9UIF7 546 aa13.6□□□□□ -0.23
SYNE4-203ENST00000397428 LRFN2Q9ULH4 789 aa13.6□□□□□ -0.23
SYNE4-203ENST00000397428 NOC2LQ9Y3T9 749 aaKnown RBP13.6□□□□□ -0.23
SYNE4-203ENST00000397428 PCDHB7Q9Y5E2 793 aa13.6□□□□□ -0.23
SYNE4-203ENST00000397428 IGLV3-22A0A075B6J6 115 aa13.59□□□□□ -0.23
SYNE4-203ENST00000397428 hCG_1984214I3L0E3 225 aa13.59□□□□□ -0.23
SYNE4-203ENST00000397428 GLP2RO95838 553 aa13.59□□□□□ -0.23
SYNE4-203ENST00000397428 CYP3A4P08684 503 aa13.59□□□□□ -0.23
SYNE4-203ENST00000397428 NRIP1P48552 1158 aa13.59□□□□□ -0.23
SYNE4-203ENST00000397428 NHLH1Q02575 133 aa13.59□□□□□ -0.23
SYNE4-203ENST00000397428 UBE3AQ05086 875 aa13.59□□□□□ -0.23
SYNE4-203ENST00000397428 AP3B2Q13367 1082 aa13.59□□□□□ -0.23
SYNE4-203ENST00000397428 CBX2Q14781 532 aaPredicted RBP13.59□□□□□ -0.23
SYNE4-203ENST00000397428 FAM102BQ5T8I3 360 aa13.59□□□□□ -0.23
SYNE4-203ENST00000397428 FAM160B1Q5W0V3 765 aa13.59□□□□□ -0.23
SYNE4-203ENST00000397428 SLC24A5Q71RS6 500 aa13.59□□□□□ -0.23
SYNE4-203ENST00000397428 ZNF713Q8N859 430 aaPredicted RBP13.59□□□□□ -0.23
SYNE4-203ENST00000397428 SMRP1Q8NCR6 262 aa13.59□□□□□ -0.23
SYNE4-203ENST00000397428 TMEM40Q8WWA1 233 aa13.59□□□□□ -0.23
SYNE4-203ENST00000397428 MFSD14AQ96MC6 490 aa13.59□□□□□ -0.23
SYNE4-203ENST00000397428 ADAM2Q99965 735 aa13.59□□□□□ -0.23
SYNE4-203ENST00000397428 TLE6Q9H808 572 aa13.59□□□□□ -0.23
SYNE4-203ENST00000397428 C1orf112Q9NSG2 853 aa13.59□□□□□ -0.23
SYNE4-203ENST00000397428 ST3GAL5Q9UNP4 418 aa13.59□□□□□ -0.23
SYNE4-203ENST00000397428 PCDHB12Q9Y5F1 795 aa13.59□□□□□ -0.23
SYNE4-203ENST00000397428 WDFY4Q6ZS81 3184 aa13.59□□□□□ -0.23
SYNE4-203ENST00000397428 KIAA1671Q9BY89 1806 aa13.59□□□□□ -0.23
SYNE4-203ENST00000397428 COL1A2P08123 1366 aa13.58□□□□□ -0.23
SYNE4-203ENST00000397428 FAM86B1E9PN63 330 aa13.58□□□□□ -0.24
SYNE4-203ENST00000397428 GPR182O15218 404 aa13.58□□□□□ -0.24
SYNE4-203ENST00000397428 ZBTB43O43298 467 aa13.58□□□□□ -0.24
SYNE4-203ENST00000397428 RPS6KA5O75582 802 aa13.58□□□□□ -0.24
SYNE4-203ENST00000397428 FAM86B2P0C5J1 330 aa13.58□□□□□ -0.24
SYNE4-203ENST00000397428 NDUFV1P49821 464 aa13.58□□□□□ -0.24
SYNE4-203ENST00000397428 CRYBB1P53674 252 aaPredicted RBP13.58□□□□□ -0.24
SYNE4-203ENST00000397428 RTN1Q16799 776 aa13.58□□□□□ -0.24
SYNE4-203ENST00000397428 ODR4Q5SWX8 454 aa13.58□□□□□ -0.24
SYNE4-203ENST00000397428 RNF20Q5VTR2 975 aa13.58□□□□□ -0.24
SYNE4-203ENST00000397428 PDE12Q6L8Q7 609 aaKnown RBP13.58□□□□□ -0.24
SYNE4-203ENST00000397428 SWSAP1Q6NVH7 229 aa13.58□□□□□ -0.24
SYNE4-203ENST00000397428 ANO2Q9NQ90 1003 aa13.58□□□□□ -0.24
SYNE4-203ENST00000397428 ZNF302Q9NR11 478 aa13.58□□□□□ -0.24
SYNE4-203ENST00000397428 TYW1Q9NV66 732 aaKnown RBP13.58□□□□□ -0.24
SYNE4-203ENST00000397428 MAFBQ9Y5Q3 323 aaPredicted RBP13.58□□□□□ -0.24
SYNE4-203ENST00000397428 PLXNA4Q9HCM2 1894 aa13.57□□□□□ -0.24
SYNE4-203ENST00000397428 IPO5O00410 1097 aaKnown RBP13.57□□□□□ -0.24
SYNE4-203ENST00000397428 BACH1O14867 736 aa13.57□□□□□ -0.24
SYNE4-203ENST00000397428 PPFIA3O75145 1194 aa13.57□□□□□ -0.24
SYNE4-203ENST00000397428 GPR32O75388 356 aa13.57□□□□□ -0.24
SYNE4-203ENST00000397428 CDC27P30260 824 aa13.57□□□□□ -0.24
SYNE4-203ENST00000397428 ZNF76P36508 570 aa13.57□□□□□ -0.24
SYNE4-203ENST00000397428 ERVFC1P60507 584 aa13.57□□□□□ -0.24
SYNE4-203ENST00000397428 KCNC3Q14003 757 aa13.57□□□□□ -0.24
SYNE4-203ENST00000397428 DSC3Q14574 896 aa13.57□□□□□ -0.24
SYNE4-203ENST00000397428 MIS18BP1Q6P0N0 1132 aa13.57□□□□□ -0.24
SYNE4-203ENST00000397428 PDXDC2PQ6P474 469 aa13.57□□□□□ -0.24
SYNE4-203ENST00000397428 TMEM184AQ6ZMB5 413 aa13.57□□□□□ -0.24
SYNE4-203ENST00000397428 RBM23Q86U06 439 aaKnown RBP13.57□□□□□ -0.24
SYNE4-203ENST00000397428 PLA2G4DQ86XP0 818 aa13.57□□□□□ -0.24
SYNE4-203ENST00000397428 CCDC60Q8IWA6 550 aaPredicted RBP13.57□□□□□ -0.24
SYNE4-203ENST00000397428 RASEFQ8IZ41 740 aa13.57□□□□□ -0.24
SYNE4-203ENST00000397428 BBXQ8WY36 941 aaPredicted RBP13.57□□□□□ -0.24
SYNE4-203ENST00000397428 CWH43Q9H720 699 aa13.57□□□□□ -0.24
SYNE4-203ENST00000397428 ELAC1Q9H777 363 aaKnown RBP13.57□□□□□ -0.24
SYNE4-203ENST00000397428 AAASQ9NRG9 546 aa13.57□□□□□ -0.24
SYNE4-203ENST00000397428 PCDHGC5Q9Y5F6 944 aa13.57□□□□□ -0.24
SYNE4-203ENST00000397428 FNDC1Q4ZHG4 1894 aaPredicted RBP13.57□□□□□ -0.24
SYNE4-203ENST00000397428 DENND3A2RUS2 1198 aa13.56□□□□□ -0.24
SYNE4-203ENST00000397428 TBKBP1A7MCY6 615 aa13.56□□□□□ -0.24
SYNE4-203ENST00000397428 DDX39AO00148 427 aaKnown RBP13.56□□□□□ -0.24
SYNE4-203ENST00000397428 FSCN2O14926 492 aa13.56□□□□□ -0.24
SYNE4-203ENST00000397428 PER2O15055 1255 aa13.56□□□□□ -0.24
SYNE4-203ENST00000397428 ADAMTS3O15072 1205 aa13.56□□□□□ -0.24
SYNE4-203ENST00000397428 FGF18O76093 207 aa13.56□□□□□ -0.24
SYNE4-203ENST00000397428 CSPG5O95196 566 aa13.56□□□□□ -0.24
SYNE4-203ENST00000397428 C22orf31O95567 290 aa13.56□□□□□ -0.24
SYNE4-203ENST00000397428 ATF7P17544 494 aaPredicted RBP13.56□□□□□ -0.24
SYNE4-203ENST00000397428 MRE11P49959 708 aa13.56□□□□□ -0.24
SYNE4-203ENST00000397428 RCAN1P53805 252 aa13.56□□□□□ -0.24
SYNE4-203ENST00000397428 IRX6P78412 446 aaPredicted RBP13.56□□□□□ -0.24
SYNE4-203ENST00000397428 DUSP6Q16828 381 aa13.56□□□□□ -0.24
SYNE4-203ENST00000397428 PFKFB3Q16875 520 aaPredicted RBP13.56□□□□□ -0.24
SYNE4-203ENST00000397428 ADCK5Q3MIX3 580 aa13.56□□□□□ -0.24
SYNE4-203ENST00000397428 MCTP2Q6DN12 878 aa13.56□□□□□ -0.24
SYNE4-203ENST00000397428 TRIM67Q6ZTA4 783 aa13.56□□□□□ -0.24
SYNE4-203ENST00000397428 MICAL1Q8TDZ2 1067 aa13.56□□□□□ -0.24
SYNE4-203ENST00000397428 SUSD6Q92537 303 aa13.56□□□□□ -0.24
SYNE4-203ENST00000397428 TCEANC2Q96MN5 208 aa13.56□□□□□ -0.24
SYNE4-203ENST00000397428 ZMYND12Q9H0C1 365 aa13.56□□□□□ -0.24
SYNE4-203ENST00000397428 TBC1D22BQ9NU19 505 aa13.56□□□□□ -0.24
SYNE4-203ENST00000397428 TMEM161AQ9NX61 479 aa13.56□□□□□ -0.24
SYNE4-203ENST00000397428 BARX2Q9UMQ3 279 aaPredicted RBP13.56□□□□□ -0.24
SYNE4-203ENST00000397428 GINS2Q9Y248 185 aa13.56□□□□□ -0.24
SYNE4-203ENST00000397428 USP15Q9Y4E8 981 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms