RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 ZXDAP98168 799 aa19.94■□□□□ 0.78
EXOSC3-202ENST00000396521 SPOUT1Q5T280 376 aaKnown RBP19.94■□□□□ 0.78
EXOSC3-202ENST00000396521 ADGRD2Q7Z7M1 963 aa19.94■□□□□ 0.78
EXOSC3-202ENST00000396521 ELAC1Q9H777 363 aaKnown RBP19.94■□□□□ 0.78
EXOSC3-202ENST00000396521 ERVK-5Q9HDB9 667 aa19.94■□□□□ 0.78
EXOSC3-202ENST00000396521 PUF60Q9UHX1 559 aaKnown RBP19.94■□□□□ 0.78
EXOSC3-202ENST00000396521 USP15Q9Y4E8 981 aaPredicted RBP19.94■□□□□ 0.78
EXOSC3-202ENST00000396521 C5orf42Q9H799 3197 aa19.93■□□□□ 0.78
EXOSC3-202ENST00000396521 BACH1O14867 736 aa19.93■□□□□ 0.78
EXOSC3-202ENST00000396521 SLC27A2O14975 620 aa19.93■□□□□ 0.78
EXOSC3-202ENST00000396521 HOXA2O43364 376 aa19.93■□□□□ 0.78
EXOSC3-202ENST00000396521 ZNF76P36508 570 aa19.93■□□□□ 0.78
EXOSC3-202ENST00000396521 SREBF1P36956 1147 aa19.93■□□□□ 0.78
EXOSC3-202ENST00000396521 ADCY7P51828 1080 aa19.93■□□□□ 0.78
EXOSC3-202ENST00000396521 CRYBB1P53674 252 aaPredicted RBP19.93■□□□□ 0.78
EXOSC3-202ENST00000396521 RNF20Q5VTR2 975 aa19.93■□□□□ 0.78
EXOSC3-202ENST00000396521 ABHD15Q6UXT9 468 aa19.93■□□□□ 0.78
EXOSC3-202ENST00000396521 TMEM184AQ6ZMB5 413 aa19.93■□□□□ 0.78
EXOSC3-202ENST00000396521 RBM23Q86U06 439 aaKnown RBP19.93■□□□□ 0.78
EXOSC3-202ENST00000396521 KIAA0319LQ8IZA0 1049 aa19.93■□□□□ 0.78
EXOSC3-202ENST00000396521 CYP2W1Q8TAV3 490 aa19.93■□□□□ 0.78
EXOSC3-202ENST00000396521 RASGRP4Q8TDF6 673 aa19.93■□□□□ 0.78
EXOSC3-202ENST00000396521 TRAPPC12Q8WVT3 735 aa19.93■□□□□ 0.78
EXOSC3-202ENST00000396521 NEK1Q96PY6 1258 aa19.93■□□□□ 0.78
EXOSC3-202ENST00000396521 ADAM2Q99965 735 aa19.93■□□□□ 0.78
EXOSC3-202ENST00000396521 ATP6V0A4Q9HBG4 840 aa19.93■□□□□ 0.78
EXOSC3-202ENST00000396521 TMEM161AQ9NX61 479 aa19.93■□□□□ 0.78
EXOSC3-202ENST00000396521 WDFY4Q6ZS81 3184 aa19.93■□□□□ 0.78
EXOSC3-202ENST00000396521 DOCK5Q9H7D0 1870 aa19.92■□□□□ 0.78
EXOSC3-202ENST00000396521 hCG_1642624A0A1W2PR95 340 aa19.92■□□□□ 0.78
EXOSC3-202ENST00000396521 C9IYK1 514 aa19.92■□□□□ 0.78
EXOSC3-202ENST00000396521 FGF18O76093 207 aa19.92■□□□□ 0.78
EXOSC3-202ENST00000396521 CSPG5O95196 566 aa19.92■□□□□ 0.78
EXOSC3-202ENST00000396521 ARP10275 920 aa19.92■□□□□ 0.78
EXOSC3-202ENST00000396521 LAG3P18627 525 aa19.92■□□□□ 0.78
EXOSC3-202ENST00000396521 FAM189BP81408 668 aa19.92■□□□□ 0.78
EXOSC3-202ENST00000396521 ITGB3BPQ13352 177 aaPredicted RBP19.92■□□□□ 0.78
EXOSC3-202ENST00000396521 NECTIN1Q15223 517 aa19.92■□□□□ 0.78
EXOSC3-202ENST00000396521 WWC2Q6AWC2 1192 aa19.92■□□□□ 0.78
EXOSC3-202ENST00000396521 MIS18BP1Q6P0N0 1132 aa19.92■□□□□ 0.78
EXOSC3-202ENST00000396521 MICU3Q86XE3 530 aa19.92■□□□□ 0.78
EXOSC3-202ENST00000396521 FBXL6Q8N531 539 aa19.92■□□□□ 0.78
EXOSC3-202ENST00000396521 SUSD6Q92537 303 aa19.92■□□□□ 0.78
EXOSC3-202ENST00000396521 ZBTB10Q96DT7 871 aa19.92■□□□□ 0.78
EXOSC3-202ENST00000396521 ANO3Q9BYT9 981 aa19.92■□□□□ 0.78
EXOSC3-202ENST00000396521 LSG1Q9H089 658 aaKnown RBP19.92■□□□□ 0.78
EXOSC3-202ENST00000396521 NGRNQ9NPE2 291 aaKnown RBP19.92■□□□□ 0.78
EXOSC3-202ENST00000396521 ST3GAL5Q9UNP4 418 aa19.92■□□□□ 0.78
EXOSC3-202ENST00000396521 CEP131Q9UPN4 1083 aa19.92■□□□□ 0.78
EXOSC3-202ENST00000396521 GINS2Q9Y248 185 aa19.92■□□□□ 0.78
EXOSC3-202ENST00000396521 TBKBP1A7MCY6 615 aa19.91■□□□□ 0.78
EXOSC3-202ENST00000396521 PPFIA3O75145 1194 aa19.91■□□□□ 0.78
EXOSC3-202ENST00000396521 GLP2RO95838 553 aa19.91■□□□□ 0.78
EXOSC3-202ENST00000396521 HOXB8P17481 243 aaPredicted RBP19.91■□□□□ 0.78
EXOSC3-202ENST00000396521 PLCB3Q01970 1234 aa19.91■□□□□ 0.78
EXOSC3-202ENST00000396521 SIGLEC14Q08ET2 396 aa19.91■□□□□ 0.78
EXOSC3-202ENST00000396521 DUSP6Q16828 381 aa19.91■□□□□ 0.78
EXOSC3-202ENST00000396521 TMEM266Q2M3C6 531 aa19.91■□□□□ 0.78
EXOSC3-202ENST00000396521 CREB3L3Q68CJ9 461 aa19.91■□□□□ 0.78
EXOSC3-202ENST00000396521 PDXDC2PQ6P474 469 aa19.91■□□□□ 0.78
EXOSC3-202ENST00000396521 APOA5Q6Q788 366 aa19.91■□□□□ 0.78
EXOSC3-202ENST00000396521 THNSL1Q8IYQ7 743 aa19.91■□□□□ 0.78
EXOSC3-202ENST00000396521 ZNF302Q9NR11 478 aa19.91■□□□□ 0.78
EXOSC3-202ENST00000396521 TBC1D22BQ9NU19 505 aa19.91■□□□□ 0.78
EXOSC3-202ENST00000396521 BARHL2Q9NY43 387 aa19.91■□□□□ 0.78
EXOSC3-202ENST00000396521 BARX2Q9UMQ3 279 aaPredicted RBP19.91■□□□□ 0.78
EXOSC3-202ENST00000396521 NOC2LQ9Y3T9 749 aaKnown RBP19.91■□□□□ 0.78
EXOSC3-202ENST00000396521 TECTAO75443 2155 aa19.91■□□□□ 0.78
EXOSC3-202ENST00000396521 SMCO2A6NFE2 343 aa19.9■□□□□ 0.78
EXOSC3-202ENST00000396521 PPM1AP35813 382 aa19.9■□□□□ 0.78
EXOSC3-202ENST00000396521 NUBP1P53384 320 aa19.9■□□□□ 0.78
EXOSC3-202ENST00000396521 RCAN1P53805 252 aa19.9■□□□□ 0.78
EXOSC3-202ENST00000396521 BBXQ8WY36 941 aaPredicted RBP19.9■□□□□ 0.78
EXOSC3-202ENST00000396521 TMEM260Q9NX78 707 aa19.9■□□□□ 0.78
EXOSC3-202ENST00000396521 TCEAL9Q9UHQ7 104 aa19.9■□□□□ 0.78
EXOSC3-202ENST00000396521 MAGEB2O15479 319 aa19.89■□□□□ 0.77
EXOSC3-202ENST00000396521 CCNE2O96020 404 aa19.89■□□□□ 0.77
EXOSC3-202ENST00000396521 CYP3A4P08684 503 aa19.89■□□□□ 0.77
EXOSC3-202ENST00000396521 KRT17Q04695 432 aa19.89■□□□□ 0.77
EXOSC3-202ENST00000396521 SMAP1Q8IYB5 467 aaPredicted RBP19.89■□□□□ 0.77
EXOSC3-202ENST00000396521 COLGALT1Q8NBJ5 622 aa19.89■□□□□ 0.77
EXOSC3-202ENST00000396521 CNTNAP5Q8WYK1 1306 aa19.89■□□□□ 0.77
EXOSC3-202ENST00000396521 RSPH1Q8WYR4 309 aa19.89■□□□□ 0.77
EXOSC3-202ENST00000396521 ESYT1Q9BSJ8 1104 aa19.89■□□□□ 0.77
EXOSC3-202ENST00000396521 TMEM117Q9H0C3 514 aa19.89■□□□□ 0.77
EXOSC3-202ENST00000396521 TYW1Q9NV66 732 aaKnown RBP19.89■□□□□ 0.77
EXOSC3-202ENST00000396521 V9GY48 417 aaPredicted RBP19.89■□□□□ 0.77
EXOSC3-202ENST00000396521 ZDBF2Q9HCK1 2354 aa19.88■□□□□ 0.77
EXOSC3-202ENST00000396521 CARNS1A5YM72 827 aa19.88■□□□□ 0.77
EXOSC3-202ENST00000396521 IPO5O00410 1097 aaKnown RBP19.88■□□□□ 0.77
EXOSC3-202ENST00000396521 FSCN2O14926 492 aa19.88■□□□□ 0.77
EXOSC3-202ENST00000396521 ZBTB43O43298 467 aa19.88■□□□□ 0.77
EXOSC3-202ENST00000396521 CLK2P49760 499 aaKnown RBP19.88■□□□□ 0.77
EXOSC3-202ENST00000396521 GATMP50440 423 aa19.88■□□□□ 0.77
EXOSC3-202ENST00000396521 SETQ01105 290 aaPredicted RBP19.88■□□□□ 0.77
EXOSC3-202ENST00000396521 FUT2Q10981 343 aa19.88■□□□□ 0.77
EXOSC3-202ENST00000396521 RTN1Q16799 776 aa19.88■□□□□ 0.77
EXOSC3-202ENST00000396521 FAM102BQ5T8I3 360 aa19.88■□□□□ 0.77
EXOSC3-202ENST00000396521 ZNF746Q6NUN9 644 aaPredicted RBP19.88■□□□□ 0.77
EXOSC3-202ENST00000396521 SWSAP1Q6NVH7 229 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms