RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 ABI1Q8IZP0 508 aa18.53■□□□□ 0.56
DDR1-229ENST00000396342 PRUNE2Q8WUY3 3088 aa18.53■□□□□ 0.56
DDR1-229ENST00000396342 IGFLR1Q9H665 355 aa18.53■□□□□ 0.56
DDR1-229ENST00000396342 ATP6V0A4Q9HBG4 840 aa18.53■□□□□ 0.56
DDR1-229ENST00000396342 IGKV6D-21A0A0A0MT36 114 aa18.52■□□□□ 0.56
DDR1-229ENST00000396342 HOXA2O43364 376 aa18.52■□□□□ 0.56
DDR1-229ENST00000396342 GAS7O60861 476 aa18.52■□□□□ 0.56
DDR1-229ENST00000396342 MMP1P03956 469 aa18.52■□□□□ 0.56
DDR1-229ENST00000396342 SRGAP2BP0DMP2 458 aa18.52■□□□□ 0.56
DDR1-229ENST00000396342 NDUFV1P49821 464 aa18.52■□□□□ 0.56
DDR1-229ENST00000396342 CRYBB1P53674 252 aaPredicted RBP18.52■□□□□ 0.56
DDR1-229ENST00000396342 SSRP1Q08945 709 aaKnown RBP18.52■□□□□ 0.56
DDR1-229ENST00000396342 SLC24A5Q71RS6 500 aa18.52■□□□□ 0.56
DDR1-229ENST00000396342 CCDC60Q8IWA6 550 aaPredicted RBP18.52■□□□□ 0.56
DDR1-229ENST00000396342 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.52■□□□□ 0.56
DDR1-229ENST00000396342 NEK9Q8TD19 979 aa18.52■□□□□ 0.56
DDR1-229ENST00000396342 ZNF689Q96CS4 500 aaPredicted RBP18.52■□□□□ 0.56
DDR1-229ENST00000396342 ZBTB10Q96DT7 871 aa18.52■□□□□ 0.56
DDR1-229ENST00000396342 SH3GLB2Q9NR46 395 aa18.52■□□□□ 0.56
DDR1-229ENST00000396342 FAM217BQ9NTX9 383 aaPredicted RBP18.52■□□□□ 0.56
DDR1-229ENST00000396342 GABBR1Q9UBS5 961 aa18.52■□□□□ 0.56
DDR1-229ENST00000396342 AKT3Q9Y243 479 aa18.52■□□□□ 0.56
DDR1-229ENST00000396342 SNX14Q9Y5W7 946 aa18.52■□□□□ 0.56
DDR1-229ENST00000396342 CYP46A1Q9Y6A2 500 aa18.52■□□□□ 0.56
DDR1-229ENST00000396342 EYSQ5T1H1 3165 aa18.52■□□□□ 0.55
DDR1-229ENST00000396342 GRM6O15303 877 aa18.51■□□□□ 0.55
DDR1-229ENST00000396342 CCNE2O96020 404 aa18.51■□□□□ 0.55
DDR1-229ENST00000396342 XBP1P17861 261 aa18.51■□□□□ 0.55
DDR1-229ENST00000396342 SFNP31947 248 aa18.51■□□□□ 0.55
DDR1-229ENST00000396342 USP11P51784 963 aa18.51■□□□□ 0.55
DDR1-229ENST00000396342 JAK3P52333 1124 aa18.51■□□□□ 0.55
DDR1-229ENST00000396342 TMEM266Q2M3C6 531 aa18.51■□□□□ 0.55
DDR1-229ENST00000396342 PHKBQ93100 1093 aa18.51■□□□□ 0.55
DDR1-229ENST00000396342 ADAM2Q99965 735 aa18.51■□□□□ 0.55
DDR1-229ENST00000396342 TEKT3Q9BXF9 490 aa18.51■□□□□ 0.55
DDR1-229ENST00000396342 EPHX3Q9H6B9 360 aa18.51■□□□□ 0.55
DDR1-229ENST00000396342 ALG13Q9NP73 1137 aaKnown RBP18.51■□□□□ 0.55
DDR1-229ENST00000396342 PUF60Q9UHX1 559 aaKnown RBP18.51■□□□□ 0.55
DDR1-229ENST00000396342 PLAGL2Q9UPG8 496 aa18.51■□□□□ 0.55
DDR1-229ENST00000396342 MRPL42Q9Y6G3 142 aaKnown RBP18.51■□□□□ 0.55
DDR1-229ENST00000396342 EPB41L2O43491 1005 aaKnown RBP18.5■□□□□ 0.55
DDR1-229ENST00000396342 CPA1P15085 419 aa18.5■□□□□ 0.55
DDR1-229ENST00000396342 IFNAR1P17181 557 aa18.5■□□□□ 0.55
DDR1-229ENST00000396342 DNM2P50570 870 aa18.5■□□□□ 0.55
DDR1-229ENST00000396342 CDC42EP1Q00587 391 aa18.5■□□□□ 0.55
DDR1-229ENST00000396342 BMS1Q14692 1282 aaKnown RBP18.5■□□□□ 0.55
DDR1-229ENST00000396342 KIZQ2M2Z5 673 aa18.5■□□□□ 0.55
DDR1-229ENST00000396342 KIAA0319LQ8IZA0 1049 aa18.5■□□□□ 0.55
DDR1-229ENST00000396342 FBXL16Q8N461 479 aa18.5■□□□□ 0.55
DDR1-229ENST00000396342 UIMC1Q96RL1 719 aa18.5■□□□□ 0.55
DDR1-229ENST00000396342 RIT2Q99578 217 aa18.5■□□□□ 0.55
DDR1-229ENST00000396342 ST3GAL5Q9UNP4 418 aa18.5■□□□□ 0.55
DDR1-229ENST00000396342 MAFBQ9Y5Q3 323 aaPredicted RBP18.5■□□□□ 0.55
DDR1-229ENST00000396342 COL4A6Q14031 1691 aa18.5■□□□□ 0.55
DDR1-229ENST00000396342 IGLV3-22A0A075B6J6 115 aa18.49■□□□□ 0.55
DDR1-229ENST00000396342 TBKBP1A7MCY6 615 aa18.49■□□□□ 0.55
DDR1-229ENST00000396342 PI4K2BG5E9Z4 385 aa18.49■□□□□ 0.55
DDR1-229ENST00000396342 GPR37L1O60883 481 aa18.49■□□□□ 0.55
DDR1-229ENST00000396342 CDKL5O76039 1030 aa18.49■□□□□ 0.55
DDR1-229ENST00000396342 IL9P15248 144 aa18.49■□□□□ 0.55
DDR1-229ENST00000396342 CCT2P78371 535 aaKnown RBP18.49■□□□□ 0.55
DDR1-229ENST00000396342 UBE3AQ05086 875 aa18.49■□□□□ 0.55
DDR1-229ENST00000396342 LRCH2Q5VUJ6 765 aa18.49■□□□□ 0.55
DDR1-229ENST00000396342 SKAP1Q86WV1 359 aa18.49■□□□□ 0.55
DDR1-229ENST00000396342 THNSL1Q8IYQ7 743 aa18.49■□□□□ 0.55
DDR1-229ENST00000396342 KCNB2Q92953 911 aa18.49■□□□□ 0.55
DDR1-229ENST00000396342 LRFN3Q9BTN0 628 aa18.49■□□□□ 0.55
DDR1-229ENST00000396342 DISC1Q9NRI5 854 aa18.49■□□□□ 0.55
DDR1-229ENST00000396342 RGS18Q9NS28 235 aa18.49■□□□□ 0.55
DDR1-229ENST00000396342 CD207Q9UJ71 328 aa18.49■□□□□ 0.55
DDR1-229ENST00000396342 NOC2LQ9Y3T9 749 aaKnown RBP18.49■□□□□ 0.55
DDR1-229ENST00000396342 VCANP13611 3396 aa18.49■□□□□ 0.55
DDR1-229ENST00000396342 DHX15O43143 795 aaKnown RBP18.48■□□□□ 0.55
DDR1-229ENST00000396342 CHMP2AO43633 222 aa18.48■□□□□ 0.55
DDR1-229ENST00000396342 MARCH6O60337 910 aa18.48■□□□□ 0.55
DDR1-229ENST00000396342 PPFIA3O75145 1194 aa18.48■□□□□ 0.55
DDR1-229ENST00000396342 CIITAP33076 1130 aa18.48■□□□□ 0.55
DDR1-229ENST00000396342 TBC1D8BQ0IIM8 1120 aa18.48■□□□□ 0.55
DDR1-229ENST00000396342 GALNT17Q6IS24 598 aa18.48■□□□□ 0.55
DDR1-229ENST00000396342 PDE12Q6L8Q7 609 aaKnown RBP18.48■□□□□ 0.55
DDR1-229ENST00000396342 EFCAB12Q6NXP0 572 aa18.48■□□□□ 0.55
DDR1-229ENST00000396342 RUFY3Q7L099 469 aa18.48■□□□□ 0.55
DDR1-229ENST00000396342 FAM177A1Q8N128 213 aaPredicted RBP18.48■□□□□ 0.55
DDR1-229ENST00000396342 KLHL23Q8NBE8 558 aa18.48■□□□□ 0.55
DDR1-229ENST00000396342 POF1BQ8WVV4 589 aa18.48■□□□□ 0.55
DDR1-229ENST00000396342 PPP1R16BQ96T49 567 aa18.48■□□□□ 0.55
DDR1-229ENST00000396342 OSMRQ99650 979 aa18.48■□□□□ 0.55
DDR1-229ENST00000396342 ERVK-5Q9HDB9 667 aa18.48■□□□□ 0.55
DDR1-229ENST00000396342 VPS54Q9P1Q0 977 aa18.48■□□□□ 0.55
DDR1-229ENST00000396342 NCOR1O75376 2440 aa18.47■□□□□ 0.55
DDR1-229ENST00000396342 DCXO43602 365 aa18.47■□□□□ 0.55
DDR1-229ENST00000396342 DKC1O60832 514 aaKnown RBP eCLIP18.47■□□□□ 0.55
DDR1-229ENST00000396342 DEXIO95424 95 aa18.47■□□□□ 0.55
DDR1-229ENST00000396342 C22orf31O95567 290 aa18.47■□□□□ 0.55
DDR1-229ENST00000396342 OATP04181 439 aa18.47■□□□□ 0.55
DDR1-229ENST00000396342 LAG3P18627 525 aa18.47■□□□□ 0.55
DDR1-229ENST00000396342 PDIA3P30101 505 aaKnown RBP18.47■□□□□ 0.55
DDR1-229ENST00000396342 KRT17Q04695 432 aa18.47■□□□□ 0.55
DDR1-229ENST00000396342 SMAD4Q13485 552 aaKnown RBP18.47■□□□□ 0.55
DDR1-229ENST00000396342 CLUL1Q15846 466 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms