RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 WRAP73Q9P2S5 460 aaPredicted RBP18.43■□□□□ 0.54
NUP50-202ENST00000396096 L1RE1Q9UN81 338 aa18.43■□□□□ 0.54
NUP50-202ENST00000396096 ITGB5P18084 799 aa18.42■□□□□ 0.54
NUP50-202ENST00000396096 MCM3P25205 808 aa18.42■□□□□ 0.54
NUP50-202ENST00000396096 PON1P27169 355 aa18.42■□□□□ 0.54
NUP50-202ENST00000396096 APBA1Q02410 837 aa18.42■□□□□ 0.54
NUP50-202ENST00000396096 KCNA1Q09470 495 aa18.42■□□□□ 0.54
NUP50-202ENST00000396096 EXOC3L4Q17RC7 722 aa18.42■□□□□ 0.54
NUP50-202ENST00000396096 ZNF720Q7Z2F6 126 aa18.42■□□□□ 0.54
NUP50-202ENST00000396096 NOX5Q96PH1 765 aa18.42■□□□□ 0.54
NUP50-202ENST00000396096 JADE2Q9NQC1 790 aa18.42■□□□□ 0.54
NUP50-202ENST00000396096 COL20A1Q9P218 1284 aa18.42■□□□□ 0.54
NUP50-202ENST00000396096 BZW2Q9Y6E2 419 aaKnown RBP18.42■□□□□ 0.54
NUP50-202ENST00000396096 ZBTB39O15060 712 aa18.41■□□□□ 0.54
NUP50-202ENST00000396096 UCHL3P15374 230 aa18.41■□□□□ 0.54
NUP50-202ENST00000396096 TCP1P17987 556 aaKnown RBP18.41■□□□□ 0.54
NUP50-202ENST00000396096 SLC9A1P19634 815 aa18.41■□□□□ 0.54
NUP50-202ENST00000396096 RPS12P25398 132 aaKnown RBP18.41■□□□□ 0.54
NUP50-202ENST00000396096 ANXA13P27216 316 aa18.41■□□□□ 0.54
NUP50-202ENST00000396096 NMT1P30419 496 aaKnown RBP18.41■□□□□ 0.54
NUP50-202ENST00000396096 CASP4P49662 377 aa18.41■□□□□ 0.54
NUP50-202ENST00000396096 RASSF7Q02833 373 aa18.41■□□□□ 0.54
NUP50-202ENST00000396096 KLHL30Q0D2K2 578 aa18.41■□□□□ 0.54
NUP50-202ENST00000396096 HDXQ7Z353 690 aa18.41■□□□□ 0.54
NUP50-202ENST00000396096 CREG2Q8IUH2 290 aa18.41■□□□□ 0.54
NUP50-202ENST00000396096 HOOK2Q96ED9 719 aa18.41■□□□□ 0.54
NUP50-202ENST00000396096 LXNQ9BS40 222 aa18.41■□□□□ 0.54
NUP50-202ENST00000396096 TAOK3Q9H2K8 898 aa18.41■□□□□ 0.54
NUP50-202ENST00000396096 ABCB6Q9NP58 842 aa18.41■□□□□ 0.54
NUP50-202ENST00000396096 ST7Q9NRC1 585 aa18.41■□□□□ 0.54
NUP50-202ENST00000396096 SALL4Q9UJQ4 1053 aa18.41■□□□□ 0.54
NUP50-202ENST00000396096 UBIAD1Q9Y5Z9 338 aa18.41■□□□□ 0.54
NUP50-202ENST00000396096 SFI1A8K8P3 1242 aa18.41■□□□□ 0.54
NUP50-202ENST00000396096 PDE2AO00408 941 aaPredicted RBP18.41■□□□□ 0.54
NUP50-202ENST00000396096 CTNND1O60716 968 aaKnown RBP18.41■□□□□ 0.54
NUP50-202ENST00000396096 PSMC2P35998 433 aaKnown RBP18.41■□□□□ 0.54
NUP50-202ENST00000396096 NAB2Q15742 525 aa18.41■□□□□ 0.54
NUP50-202ENST00000396096 C10orf76Q5T2E6 689 aa18.41■□□□□ 0.54
NUP50-202ENST00000396096 PCNX4Q63HM2 1172 aa18.41■□□□□ 0.54
NUP50-202ENST00000396096 GBP6Q6ZN66 633 aa18.41■□□□□ 0.54
NUP50-202ENST00000396096 IRF2BP2Q7Z5L9 587 aa18.41■□□□□ 0.54
NUP50-202ENST00000396096 JDP2Q8WYK2 163 aa18.41■□□□□ 0.54
NUP50-202ENST00000396096 CAPZA3Q96KX2 299 aa18.41■□□□□ 0.54
NUP50-202ENST00000396096 STRA6Q9BX79 667 aa18.41■□□□□ 0.54
NUP50-202ENST00000396096 SLC38A10Q9HBR0 1119 aa18.41■□□□□ 0.54
NUP50-202ENST00000396096 TSKSQ9UJT2 592 aa18.41■□□□□ 0.54
NUP50-202ENST00000396096 PNMA2Q9UL42 364 aa18.41■□□□□ 0.54
NUP50-202ENST00000396096 HYOU1Q9Y4L1 999 aa18.41■□□□□ 0.54
NUP50-202ENST00000396096 ATP8B3O60423 1300 aa18.41■□□□□ 0.54
NUP50-202ENST00000396096 PARP14Q460N5 1801 aa18.4■□□□□ 0.54
NUP50-202ENST00000396096 BTNL10A8MVZ5 291 aa18.4■□□□□ 0.54
NUP50-202ENST00000396096 NFIBO00712 420 aa18.4■□□□□ 0.54
NUP50-202ENST00000396096 ZNF185O15231 689 aa18.4■□□□□ 0.54
NUP50-202ENST00000396096 DHX15O43143 795 aaKnown RBP18.4■□□□□ 0.54
NUP50-202ENST00000396096 PRKCIP41743 596 aa18.4■□□□□ 0.54
NUP50-202ENST00000396096 SF3B2Q13435 895 aaKnown RBP18.4■□□□□ 0.54
NUP50-202ENST00000396096 FAM133AQ8N9E0 248 aa18.4■□□□□ 0.54
NUP50-202ENST00000396096 CAGE1Q8TC20 777 aa18.4■□□□□ 0.54
NUP50-202ENST00000396096 POLD4Q9HCU8 107 aa18.4■□□□□ 0.54
NUP50-202ENST00000396096 SIX2Q9NPC8 291 aa18.4■□□□□ 0.54
NUP50-202ENST00000396096 KCNH7Q9NS40 1196 aa18.4■□□□□ 0.54
NUP50-202ENST00000396096 DMAC2Q9NW81 257 aa18.4■□□□□ 0.54
NUP50-202ENST00000396096 DOCK1Q14185 1865 aa18.39■□□□□ 0.54
NUP50-202ENST00000396096 CLIC2O15247 247 aa18.39■□□□□ 0.54
NUP50-202ENST00000396096 PPP1R37O75864 691 aa18.39■□□□□ 0.54
NUP50-202ENST00000396096 ACTN1P12814 892 aa18.39■□□□□ 0.54
NUP50-202ENST00000396096 MAPK7Q13164 816 aa18.39■□□□□ 0.54
NUP50-202ENST00000396096 SMC1AQ14683 1233 aaKnown RBP18.39■□□□□ 0.54
NUP50-202ENST00000396096 DALRD3Q5D0E6 543 aaKnown RBP18.39■□□□□ 0.54
NUP50-202ENST00000396096 DCAF17Q5H9S7 520 aaPredicted RBP18.39■□□□□ 0.54
NUP50-202ENST00000396096 SAMD1Q6SPF0 538 aaPredicted RBP18.39■□□□□ 0.54
NUP50-202ENST00000396096 DEFB132Q7Z7B7 95 aa18.39■□□□□ 0.54
NUP50-202ENST00000396096 GPIHBP1Q8IV16 184 aa18.39■□□□□ 0.54
NUP50-202ENST00000396096 FAM178BQ8IXR5 827 aa18.39■□□□□ 0.54
NUP50-202ENST00000396096 MMGT1Q8N4V1 131 aa18.39■□□□□ 0.54
NUP50-202ENST00000396096 GOLGA5Q8TBA6 731 aa18.39■□□□□ 0.54
NUP50-202ENST00000396096 OSBPL9Q96SU4 736 aa18.39■□□□□ 0.54
NUP50-202ENST00000396096 A0A087X0T9 212 aa18.39■□□□□ 0.53
NUP50-202ENST00000396096 ARHGEF35A5YM69 484 aa18.39■□□□□ 0.53
NUP50-202ENST00000396096 PPP1R12BO60237 982 aaPredicted RBP18.39■□□□□ 0.53
NUP50-202ENST00000396096 LYPLA2O95372 231 aa18.39■□□□□ 0.53
NUP50-202ENST00000396096 P4HBP07237 508 aaKnown RBP18.39■□□□□ 0.53
NUP50-202ENST00000396096 FAM228BP0C875 321 aa18.39■□□□□ 0.53
NUP50-202ENST00000396096 JAM2P57087 298 aa18.39■□□□□ 0.53
NUP50-202ENST00000396096 MYBPC2Q14324 1141 aa18.39■□□□□ 0.53
NUP50-202ENST00000396096 TKFCQ3LXA3 575 aa18.39■□□□□ 0.53
NUP50-202ENST00000396096 ZC2HC1CQ53FD0 456 aaPredicted RBP18.39■□□□□ 0.53
NUP50-202ENST00000396096 MIER3Q7Z3K6 550 aa18.39■□□□□ 0.53
NUP50-202ENST00000396096 SLC9A9Q8IVB4 645 aa18.39■□□□□ 0.53
NUP50-202ENST00000396096 FAM186BQ8IYM0 893 aa18.39■□□□□ 0.53
NUP50-202ENST00000396096 ZFP91Q96JP5 570 aaPredicted RBP18.39■□□□□ 0.53
NUP50-202ENST00000396096 AGO4Q9HCK5 861 aaKnown RBP18.39■□□□□ 0.53
NUP50-202ENST00000396096 DBR1Q9UK59 544 aaKnown RBP18.39■□□□□ 0.53
NUP50-202ENST00000396096 PCDHB13Q9Y5F0 798 aa18.39■□□□□ 0.53
NUP50-202ENST00000396096 MAPTP10636 758 aaKnown RBP18.38■□□□□ 0.53
NUP50-202ENST00000396096 HS2ST1Q7LGA3 356 aa18.38■□□□□ 0.53
NUP50-202ENST00000396096 BANK1Q8NDB2 785 aa18.38■□□□□ 0.53
NUP50-202ENST00000396096 IL31RAQ8NI17 732 aa18.38■□□□□ 0.53
NUP50-202ENST00000396096 SYTL5Q8TDW5 730 aaPredicted RBP18.38■□□□□ 0.53
NUP50-202ENST00000396096 TMEM174Q8WUU8 243 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms