RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 POTEB3A0JP26 581 aa16.76■□□□□ 0.27
SCAF11-204ENST00000395454 UBA1P22314 1058 aaKnown RBP16.76■□□□□ 0.27
SCAF11-204ENST00000395454 SLC12A3P55017 1021 aa16.76■□□□□ 0.27
SCAF11-204ENST00000395454 TPD52L1Q16890 204 aaPredicted RBP16.76■□□□□ 0.27
SCAF11-204ENST00000395454 TMEM63BQ5T3F8 832 aa16.76■□□□□ 0.27
SCAF11-204ENST00000395454 POTEBQ6S5H4 581 aa16.76■□□□□ 0.27
SCAF11-204ENST00000395454 CATSPER3Q86XQ3 398 aa16.76■□□□□ 0.27
SCAF11-204ENST00000395454 TRPV1Q8NER1 839 aa16.76■□□□□ 0.27
SCAF11-204ENST00000395454 PRDM10Q9NQV6 1147 aa16.76■□□□□ 0.27
SCAF11-204ENST00000395454 DDX41Q9UJV9 622 aaKnown RBP16.76■□□□□ 0.27
SCAF11-204ENST00000395454 KIAA1024Q9UPX6 916 aa16.76■□□□□ 0.27
SCAF11-204ENST00000395454 MAPK8IP1Q9UQF2 711 aa16.76■□□□□ 0.27
SCAF11-204ENST00000395454 TRIM49BA6NDI0 452 aa16.75■□□□□ 0.27
SCAF11-204ENST00000395454 KCNJ18B7U540 433 aa16.75■□□□□ 0.27
SCAF11-204ENST00000395454 DDX39AO00148 427 aaKnown RBP16.75■□□□□ 0.27
SCAF11-204ENST00000395454 GAS7O60861 476 aa16.75■□□□□ 0.27
SCAF11-204ENST00000395454 PLA2G4BP0C869 781 aa16.75■□□□□ 0.27
SCAF11-204ENST00000395454 KCNA2P16389 499 aa16.75■□□□□ 0.27
SCAF11-204ENST00000395454 MUTP22033 750 aa16.75■□□□□ 0.27
SCAF11-204ENST00000395454 ITGB3BPQ13352 177 aaPredicted RBP16.75■□□□□ 0.27
SCAF11-204ENST00000395454 KCNJ12Q14500 433 aa16.75■□□□□ 0.27
SCAF11-204ENST00000395454 PKN2Q16513 984 aaKnown RBP16.75■□□□□ 0.27
SCAF11-204ENST00000395454 FILIP1LQ4L180 1135 aa16.75■□□□□ 0.27
SCAF11-204ENST00000395454 GJC2Q5T442 439 aaPredicted RBP16.75■□□□□ 0.27
SCAF11-204ENST00000395454 LRCH2Q5VUJ6 765 aa16.75■□□□□ 0.27
SCAF11-204ENST00000395454 CCDC62Q6P9F0 684 aa16.75■□□□□ 0.27
SCAF11-204ENST00000395454 FBXO46Q6PJ61 603 aaPredicted RBP16.75■□□□□ 0.27
SCAF11-204ENST00000395454 TMEM139Q8IV31 216 aa16.75■□□□□ 0.27
SCAF11-204ENST00000395454 ANKRD20A12PQ8NF67 263 aa16.75■□□□□ 0.27
SCAF11-204ENST00000395454 SENP7Q9BQF6 1050 aa16.75■□□□□ 0.27
SCAF11-204ENST00000395454 MKI67P46013 3256 aaKnown RBP16.75■□□□□ 0.27
SCAF11-204ENST00000395454 RBM47A0AV96 593 aaKnown RBP16.74■□□□□ 0.27
SCAF11-204ENST00000395454 TEX33O43247 280 aa16.74■□□□□ 0.27
SCAF11-204ENST00000395454 NRDCO43847 1150 aa16.74■□□□□ 0.27
SCAF11-204ENST00000395454 MYCP01106 439 aaPredicted RBP16.74■□□□□ 0.27
SCAF11-204ENST00000395454 AKR1A1P14550 325 aa16.74■□□□□ 0.27
SCAF11-204ENST00000395454 SMPD1P17405 629 aa16.74■□□□□ 0.27
SCAF11-204ENST00000395454 CCND3P30281 292 aaPredicted RBP16.74■□□□□ 0.27
SCAF11-204ENST00000395454 COPB1P53618 953 aaKnown RBP16.74■□□□□ 0.27
SCAF11-204ENST00000395454 TNFAIP2Q03169 654 aa16.74■□□□□ 0.27
SCAF11-204ENST00000395454 NEDD9Q14511 834 aa16.74■□□□□ 0.27
SCAF11-204ENST00000395454 MAP3K21Q5TCX8 1036 aa16.74■□□□□ 0.27
SCAF11-204ENST00000395454 IQSEC1Q6DN90 963 aa16.74■□□□□ 0.27
SCAF11-204ENST00000395454 CYFIP1Q7L576 1253 aa16.74■□□□□ 0.27
SCAF11-204ENST00000395454 TC2NQ8N9U0 490 aa16.74■□□□□ 0.27
SCAF11-204ENST00000395454 COPS5Q92905 334 aa16.74■□□□□ 0.27
SCAF11-204ENST00000395454 BCAS3Q9H6U6 928 aa16.74■□□□□ 0.27
SCAF11-204ENST00000395454 FAM184BQ9ULE4 1060 aa16.74■□□□□ 0.27
SCAF11-204ENST00000395454 ADCY6O43306 1168 aa16.74■□□□□ 0.27
SCAF11-204ENST00000395454 GGPS1O95749 300 aa16.74■□□□□ 0.27
SCAF11-204ENST00000395454 CYP11B2P19099 503 aa16.74■□□□□ 0.27
SCAF11-204ENST00000395454 SP4Q02446 784 aa16.74■□□□□ 0.27
SCAF11-204ENST00000395454 LENG1Q96BZ8 264 aaPredicted RBP16.74■□□□□ 0.27
SCAF11-204ENST00000395454 HSD17B14Q9BPX1 270 aa16.74■□□□□ 0.27
SCAF11-204ENST00000395454 MLXIPQ9HAP2 919 aa16.74■□□□□ 0.27
SCAF11-204ENST00000395454 TUFT1Q9NNX1 390 aa16.74■□□□□ 0.27
SCAF11-204ENST00000395454 TBC1D22BQ9NU19 505 aa16.74■□□□□ 0.27
SCAF11-204ENST00000395454 PCDHA2Q9Y5H9 948 aa16.74■□□□□ 0.27
SCAF11-204ENST00000395454 POTEFA5A3E0 1075 aa16.73■□□□□ 0.27
SCAF11-204ENST00000395454 E9PMD0 336 aa16.73■□□□□ 0.27
SCAF11-204ENST00000395454 SEPT4O43236 478 aa16.73■□□□□ 0.27
SCAF11-204ENST00000395454 CHMP2AO43633 222 aa16.73■□□□□ 0.27
SCAF11-204ENST00000395454 FECHP22830 423 aa16.73■□□□□ 0.27
SCAF11-204ENST00000395454 LRRC63Q05C16 580 aa16.73■□□□□ 0.27
SCAF11-204ENST00000395454 DUSP28Q4G0W2 176 aa16.73■□□□□ 0.27
SCAF11-204ENST00000395454 POTEGQ6S5H5 508 aa16.73■□□□□ 0.27
SCAF11-204ENST00000395454 DHX37Q8IY37 1157 aaKnown RBP16.73■□□□□ 0.27
SCAF11-204ENST00000395454 CCAR2Q8N163 923 aaKnown RBP16.73■□□□□ 0.27
SCAF11-204ENST00000395454 SYT2Q8N9I0 419 aaPredicted RBP16.73■□□□□ 0.27
SCAF11-204ENST00000395454 RIT2Q99578 217 aa16.73■□□□□ 0.27
SCAF11-204ENST00000395454 TEKT3Q9BXF9 490 aa16.73■□□□□ 0.27
SCAF11-204ENST00000395454 JPH1Q9HDC5 661 aaPredicted RBP16.73■□□□□ 0.27
SCAF11-204ENST00000395454 BMP2KQ9NSY1 1161 aaPredicted RBP16.73■□□□□ 0.27
SCAF11-204ENST00000395454 DHX15O43143 795 aaKnown RBP16.72■□□□□ 0.27
SCAF11-204ENST00000395454 COASYQ13057 564 aa16.72■□□□□ 0.27
SCAF11-204ENST00000395454 ANKRD40Q6AI12 368 aa16.72■□□□□ 0.27
SCAF11-204ENST00000395454 NCAPH2Q6IBW4 605 aa16.72■□□□□ 0.27
SCAF11-204ENST00000395454 METTL7BQ6UX53 244 aa16.72■□□□□ 0.27
SCAF11-204ENST00000395454 NYAP1Q6ZVC0 841 aa16.72■□□□□ 0.27
SCAF11-204ENST00000395454 DYMQ7RTS9 669 aa16.72■□□□□ 0.27
SCAF11-204ENST00000395454 CSGALNACT2Q8N6G5 542 aa16.72■□□□□ 0.27
SCAF11-204ENST00000395454 PANX2Q96RD6 677 aa16.72■□□□□ 0.27
SCAF11-204ENST00000395454 SEMA6BQ9H3T3 888 aa16.72■□□□□ 0.27
SCAF11-204ENST00000395454 HMX1Q9NP08 348 aaPredicted RBP16.72■□□□□ 0.27
SCAF11-204ENST00000395454 TCEAL9Q9UHQ7 104 aa16.72■□□□□ 0.27
SCAF11-204ENST00000395454 NFASCO94856 1347 aa16.72■□□□□ 0.27
SCAF11-204ENST00000395454 A0A1W2PQC6 194 aa16.72■□□□□ 0.27
SCAF11-204ENST00000395454 LGALS16A8MUM7 142 aa16.72■□□□□ 0.27
SCAF11-204ENST00000395454 EML1O00423 815 aa16.72■□□□□ 0.27
SCAF11-204ENST00000395454 FARP2O94887 1054 aaPredicted RBP16.72■□□□□ 0.27
SCAF11-204ENST00000395454 ZCWPW2Q504Y3 356 aa16.72■□□□□ 0.27
SCAF11-204ENST00000395454 ARSHQ5FYA8 562 aa16.72■□□□□ 0.27
SCAF11-204ENST00000395454 CELF3Q5SZQ8 465 aaKnown RBP16.72■□□□□ 0.27
SCAF11-204ENST00000395454 E4F1Q66K89 784 aaPredicted RBP16.72■□□□□ 0.27
SCAF11-204ENST00000395454 FAM114A1Q8IWE2 563 aa16.72■□□□□ 0.27
SCAF11-204ENST00000395454 ZNF507Q8TCN5 953 aa16.72■□□□□ 0.27
SCAF11-204ENST00000395454 HPS3Q969F9 1004 aa16.72■□□□□ 0.27
SCAF11-204ENST00000395454 EIF2AK1Q9BQI3 630 aaKnown RBP16.72■□□□□ 0.27
SCAF11-204ENST00000395454 SLC39A2Q9NP94 309 aa16.72■□□□□ 0.27
SCAF11-204ENST00000395454 SLC9A2Q9UBY0 812 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms