RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 LOC730098B7Z3J9 87 aa24.07■■□□□ 1.44
TRAF4-203ENST00000394925 MEIS1O00470 390 aa24.07■■□□□ 1.44
TRAF4-203ENST00000394925 PER2O15055 1255 aa24.07■■□□□ 1.44
TRAF4-203ENST00000394925 HBP1O60381 514 aa24.07■■□□□ 1.44
TRAF4-203ENST00000394925 RPS6KA5O75582 802 aa24.07■■□□□ 1.44
TRAF4-203ENST00000394925 FOSP01100 380 aaPredicted RBP24.07■■□□□ 1.44
TRAF4-203ENST00000394925 ADCY7P51828 1080 aa24.07■■□□□ 1.44
TRAF4-203ENST00000394925 NECTIN1Q15223 517 aa24.07■■□□□ 1.44
TRAF4-203ENST00000394925 ADAM2Q99965 735 aa24.07■■□□□ 1.44
TRAF4-203ENST00000394925 AAASQ9NRG9 546 aa24.07■■□□□ 1.44
TRAF4-203ENST00000394925 TMEM260Q9NX78 707 aa24.07■■□□□ 1.44
TRAF4-203ENST00000394925 IGKV6D-21A0A0A0MT36 114 aa24.06■■□□□ 1.44
TRAF4-203ENST00000394925 TMEM221A6NGB7 291 aa24.06■■□□□ 1.44
TRAF4-203ENST00000394925 M0R296 226 aa24.06■■□□□ 1.44
TRAF4-203ENST00000394925 CCNE2O96020 404 aa24.06■■□□□ 1.44
TRAF4-203ENST00000394925 ZNF76P36508 570 aa24.06■■□□□ 1.44
TRAF4-203ENST00000394925 FAM102BQ5T8I3 360 aa24.06■■□□□ 1.44
TRAF4-203ENST00000394925 FAM160B1Q5W0V3 765 aa24.06■■□□□ 1.44
TRAF4-203ENST00000394925 ABHD15Q6UXT9 468 aa24.06■■□□□ 1.44
TRAF4-203ENST00000394925 TRIM67Q6ZTA4 783 aa24.06■■□□□ 1.44
TRAF4-203ENST00000394925 KIAA0319LQ8IZA0 1049 aa24.06■■□□□ 1.44
TRAF4-203ENST00000394925 ATP8B4Q8TF62 1192 aa24.06■■□□□ 1.44
TRAF4-203ENST00000394925 TMEM40Q8WWA1 233 aa24.06■■□□□ 1.44
TRAF4-203ENST00000394925 ESYT1Q9BSJ8 1104 aa24.06■■□□□ 1.44
TRAF4-203ENST00000394925 TLR9Q9NR96 1032 aa24.06■■□□□ 1.44
TRAF4-203ENST00000394925 RGS18Q9NS28 235 aa24.06■■□□□ 1.44
TRAF4-203ENST00000394925 ST3GAL5Q9UNP4 418 aa24.06■■□□□ 1.44
TRAF4-203ENST00000394925 ZDBF2Q9HCK1 2354 aa24.05■■□□□ 1.44
TRAF4-203ENST00000394925 SMCO2A6NFE2 343 aa24.05■■□□□ 1.44
TRAF4-203ENST00000394925 RBM10P98175 930 aaKnown RBP24.05■■□□□ 1.44
TRAF4-203ENST00000394925 UBE3AQ05086 875 aa24.05■■□□□ 1.44
TRAF4-203ENST00000394925 PPP1R18Q6NYC8 613 aa24.05■■□□□ 1.44
TRAF4-203ENST00000394925 APOA5Q6Q788 366 aa24.05■■□□□ 1.44
TRAF4-203ENST00000394925 BMP8AQ7Z5Y6 402 aa24.05■■□□□ 1.44
TRAF4-203ENST00000394925 CCDC60Q8IWA6 550 aaPredicted RBP24.05■■□□□ 1.44
TRAF4-203ENST00000394925 PBXIP1Q96AQ6 731 aa24.05■■□□□ 1.44
TRAF4-203ENST00000394925 PPP1R16BQ96T49 567 aa24.05■■□□□ 1.44
TRAF4-203ENST00000394925 C1orf112Q9NSG2 853 aa24.05■■□□□ 1.44
TRAF4-203ENST00000394925 RBM28Q9NW13 759 aaKnown RBP24.05■■□□□ 1.44
TRAF4-203ENST00000394925 HCSTQ9UBK5 93 aa24.05■■□□□ 1.44
TRAF4-203ENST00000394925 V9GY48 417 aaPredicted RBP24.05■■□□□ 1.44
TRAF4-203ENST00000394925 FGF18O76093 207 aa24.04■■□□□ 1.44
TRAF4-203ENST00000394925 SREBF1P36956 1147 aa24.04■■□□□ 1.44
TRAF4-203ENST00000394925 ZXDAP98168 799 aa24.04■■□□□ 1.44
TRAF4-203ENST00000394925 CBX2Q14781 532 aaPredicted RBP24.04■■□□□ 1.44
TRAF4-203ENST00000394925 ODR4Q5SWX8 454 aa24.04■■□□□ 1.44
TRAF4-203ENST00000394925 PDXDC2PQ6P474 469 aa24.04■■□□□ 1.44
TRAF4-203ENST00000394925 SLC24A5Q71RS6 500 aa24.04■■□□□ 1.44
TRAF4-203ENST00000394925 THNSL1Q8IYQ7 743 aa24.04■■□□□ 1.44
TRAF4-203ENST00000394925 RPGRIP1Q96KN7 1286 aa24.04■■□□□ 1.44
TRAF4-203ENST00000394925 PHF7Q9BWX1 381 aaPredicted RBP24.04■■□□□ 1.44
TRAF4-203ENST00000394925 ANO2Q9NQ90 1003 aa24.04■■□□□ 1.44
TRAF4-203ENST00000394925 ZNF302Q9NR11 478 aa24.04■■□□□ 1.44
TRAF4-203ENST00000394925 TYW1Q9NV66 732 aaKnown RBP24.04■■□□□ 1.44
TRAF4-203ENST00000394925 RNF216Q9NWF9 866 aaPredicted RBP24.04■■□□□ 1.44
TRAF4-203ENST00000394925 COL1A2P08123 1366 aa24.03■■□□□ 1.44
TRAF4-203ENST00000394925 C9IYK1 514 aa24.03■■□□□ 1.44
TRAF4-203ENST00000394925 GPR182O15218 404 aa24.03■■□□□ 1.44
TRAF4-203ENST00000394925 ERVFC1P60507 584 aa24.03■■□□□ 1.44
TRAF4-203ENST00000394925 RTN1Q16799 776 aa24.03■■□□□ 1.44
TRAF4-203ENST00000394925 ZNF484Q5JVG2 852 aa24.03■■□□□ 1.44
TRAF4-203ENST00000394925 IER5LQ5T953 404 aa24.03■■□□□ 1.44
TRAF4-203ENST00000394925 SWSAP1Q6NVH7 229 aa24.03■■□□□ 1.44
TRAF4-203ENST00000394925 TEX2Q8IWB9 1127 aa24.03■■□□□ 1.44
TRAF4-203ENST00000394925 COLGALT1Q8NBJ5 622 aa24.03■■□□□ 1.44
TRAF4-203ENST00000394925 VN1R2Q8NFZ6 395 aa24.03■■□□□ 1.44
TRAF4-203ENST00000394925 IRX6P78412 446 aaPredicted RBP24.02■■□□□ 1.44
TRAF4-203ENST00000394925 FUT2Q10981 343 aa24.02■■□□□ 1.44
TRAF4-203ENST00000394925 AP3B2Q13367 1082 aa24.02■■□□□ 1.44
TRAF4-203ENST00000394925 DUSP6Q16828 381 aa24.02■■□□□ 1.44
TRAF4-203ENST00000394925 KIZQ2M2Z5 673 aa24.02■■□□□ 1.44
TRAF4-203ENST00000394925 FAM43BQ6ZT52 329 aaPredicted RBP24.02■■□□□ 1.44
TRAF4-203ENST00000394925 NIPA1Q7RTP0 329 aa24.02■■□□□ 1.44
TRAF4-203ENST00000394925 PLA2G4DQ86XP0 818 aa24.02■■□□□ 1.44
TRAF4-203ENST00000394925 PRSS33Q8NF86 280 aa24.02■■□□□ 1.44
TRAF4-203ENST00000394925 TCEANC2Q96MN5 208 aa24.02■■□□□ 1.44
TRAF4-203ENST00000394925 PHOX2BQ99453 314 aa24.02■■□□□ 1.44
TRAF4-203ENST00000394925 OSMRQ99650 979 aa24.02■■□□□ 1.44
TRAF4-203ENST00000394925 ATP6V0A4Q9HBG4 840 aa24.02■■□□□ 1.44
TRAF4-203ENST00000394925 BARHL2Q9NY43 387 aa24.02■■□□□ 1.44
TRAF4-203ENST00000394925 BRPF3Q9ULD4 1205 aa24.02■■□□□ 1.44
TRAF4-203ENST00000394925 MYH9P35579 1960 aaKnown RBP24.02■■□□□ 1.43
TRAF4-203ENST00000394925 ZBTB42B2RXF5 422 aa24.01■■□□□ 1.43
TRAF4-203ENST00000394925 FAM86B1E9PN63 330 aa24.01■■□□□ 1.43
TRAF4-203ENST00000394925 ZBTB43O43298 467 aa24.01■■□□□ 1.43
TRAF4-203ENST00000394925 FAM86B2P0C5J1 330 aa24.01■■□□□ 1.43
TRAF4-203ENST00000394925 FGFR1P11362 822 aa24.01■■□□□ 1.43
TRAF4-203ENST00000394925 ATP4AP20648 1035 aa24.01■■□□□ 1.43
TRAF4-203ENST00000394925 CLK2P49760 499 aaKnown RBP24.01■■□□□ 1.43
TRAF4-203ENST00000394925 JAKMIP3Q5VZ66 844 aa24.01■■□□□ 1.43
TRAF4-203ENST00000394925 MIS18BP1Q6P0N0 1132 aa24.01■■□□□ 1.43
TRAF4-203ENST00000394925 TRMT1LQ7Z2T5 733 aaKnown RBP24.01■■□□□ 1.43
TRAF4-203ENST00000394925 FAM228AQ86W67 206 aa24.01■■□□□ 1.43
TRAF4-203ENST00000394925 SUGP1Q8IWZ8 645 aaKnown RBP24.01■■□□□ 1.43
TRAF4-203ENST00000394925 CKAP2LQ8IYA6 745 aa24.01■■□□□ 1.43
TRAF4-203ENST00000394925 NEK1Q96PY6 1258 aa24.01■■□□□ 1.43
TRAF4-203ENST00000394925 CDCA3Q99618 268 aaPredicted RBP24.01■■□□□ 1.43
TRAF4-203ENST00000394925 hCG_1984214I3L0E3 225 aa24■■□□□ 1.43
TRAF4-203ENST00000394925 DHX15O43143 795 aaKnown RBP24■■□□□ 1.43
TRAF4-203ENST00000394925 VTNP04004 478 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms