RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 LRRC57Q8N9N7 239 aa20.06■□□□□ 0.8
PCDHA1-202ENST00000394633 C1orf131Q8NDD1 294 aaKnown RBP20.06■□□□□ 0.8
PCDHA1-202ENST00000394633 KAT2BQ92831 832 aa20.06■□□□□ 0.8
PCDHA1-202ENST00000394633 ATP6V1G3Q96LB4 118 aa20.06■□□□□ 0.8
PCDHA1-202ENST00000394633 ISCUQ9H1K1 167 aa20.06■□□□□ 0.8
PCDHA1-202ENST00000394633 SERPINB13Q9UIV8 391 aa20.06■□□□□ 0.8
PCDHA1-202ENST00000394633 PLAAQ9Y263 795 aa20.06■□□□□ 0.8
PCDHA1-202ENST00000394633 SLC26A4O43511 780 aa20.06■□□□□ 0.8
PCDHA1-202ENST00000394633 ZBTB48P10074 688 aaPredicted RBP20.06■□□□□ 0.8
PCDHA1-202ENST00000394633 HOXD13P35453 343 aa20.06■□□□□ 0.8
PCDHA1-202ENST00000394633 CDC42EP5Q6NZY7 148 aa20.06■□□□□ 0.8
PCDHA1-202ENST00000394633 HHIPL2Q6UWX4 724 aa20.06■□□□□ 0.8
PCDHA1-202ENST00000394633 FRMD5Q7Z6J6 570 aa20.06■□□□□ 0.8
PCDHA1-202ENST00000394633 TAOK3Q9H2K8 898 aa20.06■□□□□ 0.8
PCDHA1-202ENST00000394633 NAGPAQ9UK23 515 aa20.06■□□□□ 0.8
PCDHA1-202ENST00000394633 PON1P27169 355 aa20.05■□□□□ 0.8
PCDHA1-202ENST00000394633 CACNB3P54284 484 aa20.05■□□□□ 0.8
PCDHA1-202ENST00000394633 FKBP1AP62942 108 aaKnown RBP20.05■□□□□ 0.8
PCDHA1-202ENST00000394633 NFIAQ12857 509 aa20.05■□□□□ 0.8
PCDHA1-202ENST00000394633 GIT2Q14161 759 aa20.05■□□□□ 0.8
PCDHA1-202ENST00000394633 RBM46Q8TBY0 533 aaKnown RBP20.05■□□□□ 0.8
PCDHA1-202ENST00000394633 PBKQ96KB5 322 aa20.05■□□□□ 0.8
PCDHA1-202ENST00000394633 MBOAT7Q96N66 472 aa20.05■□□□□ 0.8
PCDHA1-202ENST00000394633 SPAG5Q96R06 1193 aa20.05■□□□□ 0.8
PCDHA1-202ENST00000394633 ANO3Q9BYT9 981 aa20.05■□□□□ 0.8
PCDHA1-202ENST00000394633 EPN3Q9H201 632 aa20.05■□□□□ 0.8
PCDHA1-202ENST00000394633 ARMCX3Q9UH62 379 aaPredicted RBP20.05■□□□□ 0.8
PCDHA1-202ENST00000394633 TRAF3IP3Q9Y228 551 aa20.05■□□□□ 0.8
PCDHA1-202ENST00000394633 ZBTB12Q9Y330 459 aaPredicted RBP20.05■□□□□ 0.8
PCDHA1-202ENST00000394633 CYP3A7-CYP3A51PA0A087WV96 503 aa20.04■□□□□ 0.8
PCDHA1-202ENST00000394633 CEP104O60308 925 aa20.04■□□□□ 0.8
PCDHA1-202ENST00000394633 AFPP02771 609 aaKnown RBP20.04■□□□□ 0.8
PCDHA1-202ENST00000394633 CYP3A7P24462 503 aa20.04■□□□□ 0.8
PCDHA1-202ENST00000394633 PSMC6P62333 389 aa20.04■□□□□ 0.8
PCDHA1-202ENST00000394633 PTPROQ16827 1216 aa20.04■□□□□ 0.8
PCDHA1-202ENST00000394633 B4GALNT4Q76KP1 1039 aa20.04■□□□□ 0.8
PCDHA1-202ENST00000394633 ACTRT1Q8TDG2 376 aa20.04■□□□□ 0.8
PCDHA1-202ENST00000394633 AJAP1Q9UKB5 411 aaPredicted RBP20.04■□□□□ 0.8
PCDHA1-202ENST00000394633 BZW2Q9Y6E2 419 aaKnown RBP20.04■□□□□ 0.8
PCDHA1-202ENST00000394633 HMGB1P1B2RPK0 211 aaPredicted RBP20.04■□□□□ 0.8
PCDHA1-202ENST00000394633 BHMG1C9JSJ3 638 aaPredicted RBP20.04■□□□□ 0.8
PCDHA1-202ENST00000394633 INPP5BP32019 993 aa20.04■□□□□ 0.8
PCDHA1-202ENST00000394633 HLTFQ14527 1009 aaKnown RBP eCLIP20.04■□□□□ 0.8
PCDHA1-202ENST00000394633 KNOP1Q1ED39 458 aaKnown RBP20.04■□□□□ 0.8
PCDHA1-202ENST00000394633 QRICH1Q2TAL8 776 aa20.04■□□□□ 0.8
PCDHA1-202ENST00000394633 CEP85LQ5SZL2 805 aa20.04■□□□□ 0.8
PCDHA1-202ENST00000394633 EPM2AIP1Q7L775 607 aaPredicted RBP20.04■□□□□ 0.8
PCDHA1-202ENST00000394633 MAATS1Q7Z4T9 603 aa20.04■□□□□ 0.8
PCDHA1-202ENST00000394633 SFR1Q86XK3 245 aa20.04■□□□□ 0.8
PCDHA1-202ENST00000394633 EIF1ADQ8N9N8 165 aaKnown RBP20.04■□□□□ 0.8
PCDHA1-202ENST00000394633 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.04■□□□□ 0.8
PCDHA1-202ENST00000394633 ZDHHC15Q96MV8 337 aa20.04■□□□□ 0.8
PCDHA1-202ENST00000394633 TMBIM4Q9HC24 238 aa20.04■□□□□ 0.8
PCDHA1-202ENST00000394633 USP40Q9NVE5 1235 aa20.04■□□□□ 0.8
PCDHA1-202ENST00000394633 NENFQ9UMX5 172 aa20.04■□□□□ 0.8
PCDHA1-202ENST00000394633 MYO3BQ8WXR4 1341 aa20.04■□□□□ 0.8
PCDHA1-202ENST00000394633 ATXN2Q99700 1313 aaKnown RBP20.04■□□□□ 0.8
PCDHA1-202ENST00000394633 PRKCIP41743 596 aa20.03■□□□□ 0.8
PCDHA1-202ENST00000394633 PRELPP51888 382 aa20.03■□□□□ 0.8
PCDHA1-202ENST00000394633 RBM5P52756 815 aaKnown RBP eCLIP20.03■□□□□ 0.8
PCDHA1-202ENST00000394633 SPIRE1Q08AE8 756 aa20.03■□□□□ 0.8
PCDHA1-202ENST00000394633 ITGB3BPQ13352 177 aaPredicted RBP20.03■□□□□ 0.8
PCDHA1-202ENST00000394633 PTGISQ16647 500 aa20.03■□□□□ 0.8
PCDHA1-202ENST00000394633 EXOC3L4Q17RC7 722 aa20.03■□□□□ 0.8
PCDHA1-202ENST00000394633 ALKBH5Q6P6C2 394 aaKnown RBP20.03■□□□□ 0.8
PCDHA1-202ENST00000394633 CATSPER3Q86XQ3 398 aa20.03■□□□□ 0.8
PCDHA1-202ENST00000394633 MPHOSPH10O00566 681 aaKnown RBP20.03■□□□□ 0.8
PCDHA1-202ENST00000394633 PPP1R37O75864 691 aa20.03■□□□□ 0.8
PCDHA1-202ENST00000394633 SLURP2P0DP57 97 aa20.03■□□□□ 0.8
PCDHA1-202ENST00000394633 HSD17B3P37058 310 aa20.03■□□□□ 0.8
PCDHA1-202ENST00000394633 EPHA7Q15375 998 aa20.03■□□□□ 0.8
PCDHA1-202ENST00000394633 IFI16Q16666 785 aaKnown RBP20.03■□□□□ 0.8
PCDHA1-202ENST00000394633 NAA35Q5VZE5 725 aa20.03■□□□□ 0.8
PCDHA1-202ENST00000394633 DDX42Q86XP3 938 aaKnown RBP eCLIP20.03■□□□□ 0.8
PCDHA1-202ENST00000394633 METTL13Q8N6R0 699 aa20.03■□□□□ 0.8
PCDHA1-202ENST00000394633 PROCA1Q8NCQ7 364 aaPredicted RBP20.03■□□□□ 0.8
PCDHA1-202ENST00000394633 TPCN2Q8NHX9 752 aa20.03■□□□□ 0.8
PCDHA1-202ENST00000394633 REEP2Q9BRK0 252 aa20.03■□□□□ 0.8
PCDHA1-202ENST00000394633 AP1M1Q9BXS5 423 aa20.03■□□□□ 0.8
PCDHA1-202ENST00000394633 SIX2Q9NPC8 291 aa20.03■□□□□ 0.8
PCDHA1-202ENST00000394633 MEIS1O00470 390 aa20.02■□□□□ 0.8
PCDHA1-202ENST00000394633 MDH1P40925 334 aaKnown RBP20.02■□□□□ 0.8
PCDHA1-202ENST00000394633 PABPC4Q13310 644 aaKnown RBP eCLIP20.02■□□□□ 0.8
PCDHA1-202ENST00000394633 CUL1Q13616 776 aa20.02■□□□□ 0.8
PCDHA1-202ENST00000394633 UAP1Q16222 522 aaPredicted RBP20.02■□□□□ 0.8
PCDHA1-202ENST00000394633 LRIG3Q6UXM1 1119 aa20.02■□□□□ 0.8
PCDHA1-202ENST00000394633 SLFN12Q8IYM2 578 aa20.02■□□□□ 0.8
PCDHA1-202ENST00000394633 ETNPPLQ8TBG4 499 aa20.02■□□□□ 0.8
PCDHA1-202ENST00000394633 P2RX7Q99572 595 aaKnown RBP20.02■□□□□ 0.8
PCDHA1-202ENST00000394633 NEUROG2Q9H2A3 272 aa20.02■□□□□ 0.8
PCDHA1-202ENST00000394633 NOC2LQ9Y3T9 749 aaKnown RBP20.02■□□□□ 0.8
PCDHA1-202ENST00000394633 H0YGN5 161 aa20.02■□□□□ 0.79
PCDHA1-202ENST00000394633 AKAP3O75969 853 aa20.02■□□□□ 0.79
PCDHA1-202ENST00000394633 DCAF17Q5H9S7 520 aaPredicted RBP20.02■□□□□ 0.79
PCDHA1-202ENST00000394633 RSBN1LQ6PCB5 846 aaPredicted RBP20.02■□□□□ 0.79
PCDHA1-202ENST00000394633 MMS22LQ6ZRQ5 1243 aa20.02■□□□□ 0.79
PCDHA1-202ENST00000394633 NIM1KQ8IY84 436 aa20.02■□□□□ 0.79
PCDHA1-202ENST00000394633 SYT2Q8N9I0 419 aaPredicted RBP20.02■□□□□ 0.79
PCDHA1-202ENST00000394633 ZNF473Q8WTR7 871 aaKnown RBP20.02■□□□□ 0.79
PCDHA1-202ENST00000394633 CALR3Q96L12 384 aaKnown RBP20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms