RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 SH3KBP1Q96B97 665 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 TMEM60Q9H2L4 133 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 SYNDIG1Q9H7V2 258 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 MLXIPLQ9NP71 852 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 ORC4O43929 436 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 MMEP08473 750 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 HDAC4P56524 1084 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 MRPS15P82914 257 aaKnown RBP6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 ADCY2Q08462 1091 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 MAN2A1Q16706 1144 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 TTLL7Q6ZT98 887 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 ERICH1Q86X53 443 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 DDX42Q86XP3 938 aaKnown RBP eCLIP6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 DDIASQ8IXT1 998 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 ICA1LQ8NDH6 482 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 OR9Q1Q8NGQ5 310 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 AFG1LQ8WV93 481 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 USP6NLQ92738 828 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 ARL8AQ96BM9 186 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 ULK4Q96C45 1275 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 MTBPQ96DY7 904 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 FTOQ9C0B1 505 aaKnown RBP eCLIP6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 TMEM206Q9H813 350 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 GIMAP4Q9NUV9 329 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 NDFIP2Q9NV92 336 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 HEY1Q9Y5J3 304 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 A0A1W2PP64 1363 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 PHLPP2Q6ZVD8 1323 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 SFI1A8K8P3 1242 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 TJP3O95049 919 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 FMNL1O95466 1100 aaPredicted RBP6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 HSPA1AP0DMV8 641 aaKnown RBP6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 HSPA1BP0DMV9 641 aaKnown RBP6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 AP1B1Q10567 949 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 ACCSLQ4AC99 568 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 NBPF10Q6P3W6 841 aaKnown RBP6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 AGR3Q8TD06 166 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 NEK9Q8TD19 979 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 COA7Q96BR5 231 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 DHTKD1Q96HY7 919 aaPredicted RBP6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 CHAMP1Q96JM3 812 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 EGFL8Q99944 293 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 ZBED2Q9BTP6 218 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 MSTO1Q9BUK6 570 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 PARD6BQ9BYG5 372 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 ASPSCR1Q9BZE9 553 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 TRIM33Q9UPN9 1127 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 ITSN2Q9NZM3 1697 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 A0A087WUV0 522 aaPredicted RBP6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 PPEF1O14829 653 aaPredicted RBP6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 BRD1O95696 1058 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 AP2B1P63010 937 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 CHRNDQ07001 517 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 DMC1Q14565 340 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 C11orf57Q6ZUT1 292 aaPredicted RBP6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 HEMGNQ9BXL5 484 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 CYP4F11Q9HBI6 524 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 NOP53Q9NZM5 478 aaKnown RBP6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 SEL1LQ9UBV2 794 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 ATP11BQ9Y2G3 1177 aa6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 POLR3AO14802 1390 aaPredicted RBP6.08□□□□□ -1.44
GAPVD1-206ENST00000394104 RNF103-CHMP3A0A140T963 221 aa6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 ANKRD65E5RJM6 399 aa6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 ADCY3O60266 1144 aa6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 CENPAP49450 140 aa6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 RPS8P62241 208 aaKnown RBP6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 PKP1Q13835 747 aa6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 CTTNQ14247 550 aaKnown RBP6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 ZNF394Q53GI3 561 aa6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 ALS2CLQ60I27 953 aa6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 FAM47EQ6ZV65 393 aa6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 THEM5Q8N1Q8 247 aa6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 TTC8Q8TAM2 541 aa6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 TBCKQ8TEA7 893 aa6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 SLC13A1Q9BZW2 595 aa6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 DCTN4Q9UJW0 460 aa6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 ARHGAP26Q9UNA1 814 aa6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 PRR23D1E9PI22 279 aaPredicted RBP6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 CTIFO43310 598 aaKnown RBP6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 FGAP02671 866 aa6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 PRR23D2P0DMB1 279 aaPredicted RBP6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 PDIA3P30101 505 aaKnown RBP6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 RWDD2BP57060 319 aa6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 DYNLL1P63167 89 aaKnown RBP6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 KRT72Q14CN4 511 aa6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 LRRC24Q50LG9 513 aa6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 SLC27A3Q5K4L6 730 aa6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 BTNL9Q6UXG8 535 aa6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 PLEKHM3Q6ZWE6 761 aa6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 ARMCX2Q7L311 632 aa6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 FASTKD5Q7L8L6 764 aaKnown RBP6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 EXOC8Q8IYI6 725 aa6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 KCTD17Q8N5Z5 321 aa6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 CCNYL1Q8N7R7 359 aa6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 ZNF280CQ8ND82 737 aa6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 MTMR6Q9Y217 621 aa6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 ABCC12Q96J65 1359 aa6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 UBA6A0AVT1 1052 aaPredicted RBP6.07□□□□□ -1.44
GAPVD1-206ENST00000394104 TTLL1O95922 423 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms