RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 KRIT1O00522 736 aa15.22■□□□□ 0.03
GAPVD1-205ENST00000394084 MSH4O15457 936 aa15.22■□□□□ 0.03
GAPVD1-205ENST00000394084 CHMP2AO43633 222 aa15.22■□□□□ 0.03
GAPVD1-205ENST00000394084 LSP1P33241 339 aa15.22■□□□□ 0.03
GAPVD1-205ENST00000394084 SEC24CP53992 1094 aa15.22■□□□□ 0.03
GAPVD1-205ENST00000394084 CTTNQ14247 550 aaKnown RBP15.22■□□□□ 0.03
GAPVD1-205ENST00000394084 DAAM2Q86T65 1068 aa15.22■□□□□ 0.03
GAPVD1-205ENST00000394084 ATP6V1G3Q96LB4 118 aa15.22■□□□□ 0.03
GAPVD1-205ENST00000394084 ISCUQ9H1K1 167 aa15.22■□□□□ 0.03
GAPVD1-205ENST00000394084 DBNDD1Q9H9R9 158 aa15.22■□□□□ 0.03
GAPVD1-205ENST00000394084 TYW1Q9NV66 732 aaKnown RBP15.22■□□□□ 0.03
GAPVD1-205ENST00000394084 AMACRQ9UHK6 382 aa15.22■□□□□ 0.03
GAPVD1-205ENST00000394084 BZW2Q9Y6E2 419 aaKnown RBP15.22■□□□□ 0.03
GAPVD1-205ENST00000394084 MYO3BQ8WXR4 1341 aa15.22■□□□□ 0.03
GAPVD1-205ENST00000394084 PGRMC1O00264 195 aaKnown RBP15.22■□□□□ 0.03
GAPVD1-205ENST00000394084 DDX3XO00571 662 aaKnown RBP eCLIP15.22■□□□□ 0.035e-8■■□□□ 13.6
GAPVD1-205ENST00000394084 ECHS1P30084 290 aa15.22■□□□□ 0.03
GAPVD1-205ENST00000394084 NMT1P30419 496 aaKnown RBP15.22■□□□□ 0.03
GAPVD1-205ENST00000394084 HSD17B3P37058 310 aa15.22■□□□□ 0.03
GAPVD1-205ENST00000394084 CRKP46108 304 aa15.22■□□□□ 0.03
GAPVD1-205ENST00000394084 ICA1Q05084 483 aa15.22■□□□□ 0.03
GAPVD1-205ENST00000394084 AP3B2Q13367 1082 aa15.22■□□□□ 0.03
GAPVD1-205ENST00000394084 IFI16Q16666 785 aaKnown RBP15.22■□□□□ 0.03
GAPVD1-205ENST00000394084 ZC2HC1CQ53FD0 456 aaPredicted RBP15.22■□□□□ 0.03
GAPVD1-205ENST00000394084 C10orf76Q5T2E6 689 aa15.22■□□□□ 0.03
GAPVD1-205ENST00000394084 NAA35Q5VZE5 725 aa15.22■□□□□ 0.03
GAPVD1-205ENST00000394084 FBXO11Q86XK2 927 aa15.22■□□□□ 0.03
GAPVD1-205ENST00000394084 SCFD2Q8WU76 684 aa15.22■□□□□ 0.03
GAPVD1-205ENST00000394084 PBKQ96KB5 322 aa15.22■□□□□ 0.03
GAPVD1-205ENST00000394084 CCDC17Q96LX7 622 aa15.22■□□□□ 0.03
GAPVD1-205ENST00000394084 BCCIPQ9P287 314 aaKnown RBP eCLIP15.22■□□□□ 0.03
GAPVD1-205ENST00000394084 ZBTB39O15060 712 aa15.21■□□□□ 0.03
GAPVD1-205ENST00000394084 ERLIN2O94905 339 aa15.21■□□□□ 0.03
GAPVD1-205ENST00000394084 ADRA2BP18089 450 aa15.21■□□□□ 0.03
GAPVD1-205ENST00000394084 HSPA9P38646 679 aaKnown RBP15.21■□□□□ 0.03
GAPVD1-205ENST00000394084 DCAF4Q8WV16 495 aa15.21■□□□□ 0.03
GAPVD1-205ENST00000394084 CRYGNQ8WXF5 182 aa15.21■□□□□ 0.03
GAPVD1-205ENST00000394084 RABGAP1Q9Y3P9 1069 aa15.21■□□□□ 0.03
GAPVD1-205ENST00000394084 F5H6K3 240 aa15.21■□□□□ 0.03
GAPVD1-205ENST00000394084 FLT3P36888 993 aa15.21■□□□□ 0.03
GAPVD1-205ENST00000394084 KLRC3Q07444 240 aa15.21■□□□□ 0.03
GAPVD1-205ENST00000394084 SIAH1Q8IUQ4 282 aa15.21■□□□□ 0.03
GAPVD1-205ENST00000394084 EIF2AK1Q9BQI3 630 aaKnown RBP15.21■□□□□ 0.03
GAPVD1-205ENST00000394084 CELF4Q9BZC1 486 aaKnown RBP15.21■□□□□ 0.03
GAPVD1-205ENST00000394084 BTNL10A8MVZ5 291 aa15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 POLRMTO00411 1230 aaKnown RBP15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 DAPK3O43293 454 aa15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 ABCB4P21439 1286 aa15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 RPL13P26373 211 aaKnown RBP15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 COG2Q14746 738 aa15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 VPS36Q86VN1 386 aa15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 SPICE1Q8N0Z3 855 aa15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 ACTRT1Q8TDG2 376 aa15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 UBLCP1Q8WVY7 318 aaPredicted RBP15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.2■□□□□ 0.024e-8■■□□□ 12.8
GAPVD1-205ENST00000394084 TRIM31Q9BZY9 425 aa15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 DPH5Q9H2P9 285 aa15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 OSGEPQ9NPF4 335 aa15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 SUGT1Q9Y2Z0 365 aa15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 GOLGA6L10A6NI86 522 aa15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 INPP5BP32019 993 aa15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 PRKCIP41743 596 aa15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 UAP1Q16222 522 aaPredicted RBP15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 ADAT2Q7Z6V5 191 aaKnown RBP15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 GLYCTKQ8IVS8 523 aa15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 TPH2Q8IWU9 490 aa15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 MYCT1Q8N699 235 aa15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 CTNNA1P35221 906 aaKnown RBP15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 GALCP54803 685 aa15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 UBXN2AP68543 259 aa15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 Q4G0T1 1027 aa15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 MOXD1Q6UVY6 613 aa15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 HHIPL2Q6UWX4 724 aa15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 CD302Q8IX05 232 aa15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 LNX1Q8TBB1 728 aaPredicted RBP15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 KAT2BQ92831 832 aa15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 METTL14Q9HCE5 456 aaKnown RBP15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 SEPT11Q9NVA2 429 aaKnown RBP15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 VAV3Q9UKW4 847 aa15.2■□□□□ 0.02
GAPVD1-205ENST00000394084 TTI1O43156 1089 aa15.19■□□□□ 0.02
GAPVD1-205ENST00000394084 TGFB1I1O43294 461 aa15.19■□□□□ 0.02
GAPVD1-205ENST00000394084 EVI5O60447 810 aa15.19■□□□□ 0.02
GAPVD1-205ENST00000394084 FAM13AO94988 1023 aa15.19■□□□□ 0.02
GAPVD1-205ENST00000394084 NDUFB10O96000 172 aa15.19■□□□□ 0.02
GAPVD1-205ENST00000394084 JAM2P57087 298 aa15.19■□□□□ 0.02
GAPVD1-205ENST00000394084 PRPF4BQ13523 1007 aaKnown RBP15.19■□□□□ 0.02
GAPVD1-205ENST00000394084 FAM186BQ8IYM0 893 aa15.19■□□□□ 0.02
GAPVD1-205ENST00000394084 PPANQ9NQ55 473 aaKnown RBP15.19■□□□□ 0.02
GAPVD1-205ENST00000394084 NYAP2Q9P242 653 aa15.19■□□□□ 0.02
GAPVD1-205ENST00000394084 FBXL5Q9UKA1 691 aa15.19■□□□□ 0.02
GAPVD1-205ENST00000394084 BCS1LQ9Y276 419 aa15.19■□□□□ 0.02
GAPVD1-205ENST00000394084 TULP1O00294 542 aaPredicted RBP15.19■□□□□ 0.02
GAPVD1-205ENST00000394084 PPP1R37O75864 691 aa15.19■□□□□ 0.02
GAPVD1-205ENST00000394084 SREBF1P36956 1147 aa15.19■□□□□ 0.02
GAPVD1-205ENST00000394084 FBXW10Q5XX13 1052 aa15.19■□□□□ 0.02
GAPVD1-205ENST00000394084 RINT1Q6NUQ1 792 aa15.19■□□□□ 0.02
GAPVD1-205ENST00000394084 SH3BP5LQ7L8J4 393 aa15.19■□□□□ 0.02
GAPVD1-205ENST00000394084 EPN3Q9H201 632 aa15.19■□□□□ 0.02
GAPVD1-205ENST00000394084 TMBIM4Q9HC24 238 aa15.19■□□□□ 0.02
GAPVD1-205ENST00000394084 GCOM1H8Y6P7 765 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms