RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 KNOP1Q1ED39 458 aaKnown RBP9.54□□□□□ -0.88
TDP1-203ENST00000393454 FAM102BQ5T8I3 360 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 KCNV1Q6PIU1 500 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 ANO5Q75V66 913 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 DPP9Q86TI2 863 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 SAPCD2Q86UD0 394 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 PPFIBP1Q86W92 1011 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 CCDC60Q8IWA6 550 aaPredicted RBP9.54□□□□□ -0.88
TDP1-203ENST00000393454 FBXO16Q8IX29 292 aaPredicted RBP9.54□□□□□ -0.88
TDP1-203ENST00000393454 CEP170P1Q96L14 293 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 TUBGCP2Q9BSJ2 902 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 NOC4LQ9BVI4 516 aaKnown RBP9.54□□□□□ -0.88
TDP1-203ENST00000393454 ZNF302Q9NR11 478 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 OLFML3Q9NRN5 406 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 SEL1LQ9UBV2 794 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 CPA4Q9UI42 421 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 PYCARDQ9ULZ3 195 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 SYNGAP1Q96PV0 1343 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 NRDCO43847 1150 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 CALUO43852 315 aaPredicted RBP9.54□□□□□ -0.88
TDP1-203ENST00000393454 ZNF862O60290 1169 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 FARP2O94887 1054 aaPredicted RBP9.54□□□□□ -0.88
TDP1-203ENST00000393454 ZNF131P52739 623 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 PRKCEQ02156 737 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 GOLGA8FQ08AF8 430 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 GOLGA8DPQ0D2H9 430 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 TAF1CQ15572 869 aaPredicted RBP9.54□□□□□ -0.88
TDP1-203ENST00000393454 CCDC40Q4G0X9 1142 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 ZC2HC1CQ53FD0 456 aaPredicted RBP9.54□□□□□ -0.88
TDP1-203ENST00000393454 ARMCX5Q6P1M9 558 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 STXBP4Q6ZWJ1 553 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 ARMCX2Q7L311 632 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 EPM2AIP1Q7L775 607 aaPredicted RBP9.54□□□□□ -0.88
TDP1-203ENST00000393454 GPR142Q7Z601 462 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 PLEKHH3Q7Z736 793 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 CPLX3Q8WVH0 158 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 KCTD10Q9H3F6 313 aa9.54□□□□□ -0.88
TDP1-203ENST00000393454 DDX41Q9UJV9 622 aaKnown RBP9.54□□□□□ -0.88
TDP1-203ENST00000393454 ABT1Q9ULW3 272 aaKnown RBP9.54□□□□□ -0.88
TDP1-203ENST00000393454 PLXNA1Q9UIW2 1896 aa9.53□□□□□ -0.88
TDP1-203ENST00000393454 IGF2BP3O00425 579 aaKnown RBP eCLIP9.53□□□□□ -0.88
TDP1-203ENST00000393454 ARIH2O95376 493 aa9.53□□□□□ -0.88
TDP1-203ENST00000393454 SKILP12757 684 aa9.53□□□□□ -0.88
TDP1-203ENST00000393454 MAPK7Q13164 816 aa9.53□□□□□ -0.88
TDP1-203ENST00000393454 GRM1Q13255 1194 aa9.53□□□□□ -0.88
TDP1-203ENST00000393454 ADAM9Q13443 819 aa9.53□□□□□ -0.88
TDP1-203ENST00000393454 FAM110CQ1W6H9 321 aa9.53□□□□□ -0.88
TDP1-203ENST00000393454 ZNF792Q3KQV3 632 aa9.53□□□□□ -0.88
TDP1-203ENST00000393454 ZCWPW2Q504Y3 356 aa9.53□□□□□ -0.88
TDP1-203ENST00000393454 FAM160B1Q5W0V3 765 aa9.53□□□□□ -0.88
TDP1-203ENST00000393454 ZNF720Q7Z2F6 126 aa9.53□□□□□ -0.88
TDP1-203ENST00000393454 KSR1Q8IVT5 923 aa9.53□□□□□ -0.88
TDP1-203ENST00000393454 DAW1Q8N136 415 aa9.53□□□□□ -0.88
TDP1-203ENST00000393454 C17orf53Q8N3J3 647 aaPredicted RBP9.53□□□□□ -0.88
TDP1-203ENST00000393454 ZNF507Q8TCN5 953 aa9.53□□□□□ -0.88
TDP1-203ENST00000393454 DRC1Q96MC2 740 aa9.53□□□□□ -0.88
TDP1-203ENST00000393454 LARSQ9P2J5 1176 aaKnown RBP9.53□□□□□ -0.88
TDP1-203ENST00000393454 PCDHB13Q9Y5F0 798 aa9.53□□□□□ -0.88
TDP1-203ENST00000393454 LRRC37A2A6NM11 1700 aa9.53□□□□□ -0.88
TDP1-203ENST00000393454 PASKQ96RG2 1323 aa9.53□□□□□ -0.88
TDP1-203ENST00000393454 LOC102724159A0A0B4J2E5 919 aa9.52□□□□□ -0.88
TDP1-203ENST00000393454 GSTTP1A0A1W2PQM5 241 aa9.52□□□□□ -0.88
TDP1-203ENST00000393454 LGALS16A8MUM7 142 aa9.52□□□□□ -0.88
TDP1-203ENST00000393454 K7ENM7 598 aa9.52□□□□□ -0.88
TDP1-203ENST00000393454 NOP56O00567 594 aaKnown RBP9.52□□□□□ -0.88
TDP1-203ENST00000393454 CETN3O15182 167 aa9.52□□□□□ -0.88
TDP1-203ENST00000393454 EIF3DO15371 548 aaKnown RBP eCLIP9.52□□□□□ -0.88
TDP1-203ENST00000393454 ATG7O95352 703 aa9.52□□□□□ -0.88
TDP1-203ENST00000393454 TPM1P09493 284 aa9.52□□□□□ -0.88
TDP1-203ENST00000393454 TXNP10599 105 aaKnown RBP9.52□□□□□ -0.88
TDP1-203ENST00000393454 MAPK4P31152 587 aa9.52□□□□□ -0.88
TDP1-203ENST00000393454 HOXD13P35453 343 aa9.52□□□□□ -0.88
TDP1-203ENST00000393454 ADKP55263 362 aaKnown RBP9.52□□□□□ -0.88
TDP1-203ENST00000393454 KCNA1Q09470 495 aa9.52□□□□□ -0.88
TDP1-203ENST00000393454 TBX2Q13207 712 aaPredicted RBP9.52□□□□□ -0.88
TDP1-203ENST00000393454 TTLL4Q14679 1199 aa9.52□□□□□ -0.88
TDP1-203ENST00000393454 PWP2Q15269 919 aaKnown RBP9.52□□□□□ -0.88
TDP1-203ENST00000393454 BMT2Q1RMZ1 405 aa9.52□□□□□ -0.88
TDP1-203ENST00000393454 MTERF2Q49AM1 385 aa9.52□□□□□ -0.88
TDP1-203ENST00000393454 XKR3Q5GH77 459 aa9.52□□□□□ -0.88
TDP1-203ENST00000393454 FOXR2Q6PJQ5 311 aa9.52□□□□□ -0.88
TDP1-203ENST00000393454 METTL7BQ6UX53 244 aa9.52□□□□□ -0.88
TDP1-203ENST00000393454 LRRC55Q6ZSA7 311 aa9.52□□□□□ -0.88
TDP1-203ENST00000393454 PAXIP1Q6ZW49 1069 aaPredicted RBP9.52□□□□□ -0.88
TDP1-203ENST00000393454 DHX37Q8IY37 1157 aaKnown RBP9.52□□□□□ -0.88
TDP1-203ENST00000393454 SYCP3Q8IZU3 236 aa9.52□□□□□ -0.88
TDP1-203ENST00000393454 ABRAQ8N0Z2 381 aa9.52□□□□□ -0.88
TDP1-203ENST00000393454 SEPT1Q8WYJ6 367 aa9.52□□□□□ -0.88
TDP1-203ENST00000393454 PCMTD1Q96MG8 357 aaPredicted RBP9.52□□□□□ -0.88
TDP1-203ENST00000393454 CEP63Q96MT8 703 aa9.52□□□□□ -0.88
TDP1-203ENST00000393454 TIPINQ9BVW5 301 aa9.52□□□□□ -0.88
TDP1-203ENST00000393454 GPRC5CQ9NQ84 441 aa9.52□□□□□ -0.88
TDP1-203ENST00000393454 PDGFCQ9NRA1 345 aa9.52□□□□□ -0.88
TDP1-203ENST00000393454 TYW1Q9NV66 732 aaKnown RBP9.52□□□□□ -0.88
TDP1-203ENST00000393454 IGSF9BQ9UPX0 1349 aa9.52□□□□□ -0.89
TDP1-203ENST00000393454 PDXKO00764 312 aa9.52□□□□□ -0.89
TDP1-203ENST00000393454 CLIC2O15247 247 aa9.52□□□□□ -0.89
TDP1-203ENST00000393454 STBD1O95210 358 aa9.52□□□□□ -0.89
TDP1-203ENST00000393454 PLS3P13797 630 aa9.52□□□□□ -0.89
TDP1-203ENST00000393454 NR2F2P24468 414 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms