RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 HNRNPRO43390 633 aaKnown RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 KRT38O76015 456 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 BAG2O95816 211 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 FAM107AO95990 144 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 NR2F2P24468 414 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 PDIA3P30101 505 aaKnown RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 PRAMEP78395 509 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 CDK17Q00537 523 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 USP17L24Q0WX57 530 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 CAPRIN1Q14444 709 aaKnown RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 SLMAPQ14BN4 828 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 RNF180Q86T96 592 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 TRIM48Q8IWZ4 208 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 ZNF594Q96JF6 807 aaPredicted RBP4.27□□□□□ -1.73
UBR3-202ENST00000392632 PPP1R13BQ96KQ4 1090 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 WRNIP1Q96S55 665 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 TRIM55Q9BYV6 548 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 SMARCAD1Q9H4L7 1026 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 YY1AP1Q9H869 796 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 DBNDD1Q9H9R9 158 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 ZHX2Q9Y6X8 837 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 RNF123Q5XPI4 1314 aa4.27□□□□□ -1.73
UBR3-202ENST00000392632 LRRD1A4D1F6 860 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 RASSF10A6NK89 507 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 KCNJ18B7U540 433 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 PRRG1O14668 218 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 OPHN1O60890 802 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 E2F6O75461 281 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 CYP2E1P05181 493 aaPredicted RBP4.26□□□□□ -1.73
UBR3-202ENST00000392632 CALB1P05937 261 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 PRR29P0C7W0 189 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 TBXAS1P24557 533 aaPredicted RBP4.26□□□□□ -1.73
UBR3-202ENST00000392632 SDC4P31431 198 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 EFNA5P52803 228 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 POLR2FP61218 127 aaKnown RBP4.26□□□□□ -1.73
UBR3-202ENST00000392632 MKRN3Q13064 507 aaKnown RBP4.26□□□□□ -1.73
UBR3-202ENST00000392632 KCNJ12Q14500 433 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 TKFCQ3LXA3 575 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 EFHC2Q5JST6 749 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 EEPD1Q7L9B9 569 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 SPATA2LQ8IUW3 424 aaPredicted RBP4.26□□□□□ -1.73
UBR3-202ENST00000392632 SLC16A10Q8TF71 515 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 NCLNQ969V3 563 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 RBM41Q96IZ5 413 aaKnown RBP4.26□□□□□ -1.73
UBR3-202ENST00000392632 MMP19Q99542 508 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 ACAD9Q9H845 621 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 SLC38A7Q9NVC3 462 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 BRPF3Q9ULD4 1205 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 SH3BP1Q9Y3L3 701 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 RUSC2Q8N2Y8 1516 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 ABCB11O95342 1321 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 EDC4Q6P2E9 1401 aaKnown RBP4.26□□□□□ -1.73
UBR3-202ENST00000392632 MAGEB2O15479 319 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 CIAO1O76071 339 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 LUC7L3O95232 432 aaKnown RBP4.26□□□□□ -1.73
UBR3-202ENST00000392632 ECEL1O95672 775 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 VCLP18206 1134 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 CCT5P48643 541 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 ZNF157P51786 506 aaPredicted RBP4.26□□□□□ -1.73
UBR3-202ENST00000392632 BASP1P80723 227 aaKnown RBP4.26□□□□□ -1.73
UBR3-202ENST00000392632 TP53BP2Q13625 1128 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 MESDQ14696 234 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 DCAF4L1Q3SXM0 396 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 SGO2Q562F6 1265 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 NAALADL2Q58DX5 795 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 KRT80Q6KB66 452 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 ZNF544Q6NX49 715 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 ZNF438Q7Z4V0 828 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 WDR75Q8IWA0 830 aaKnown RBP4.26□□□□□ -1.73
UBR3-202ENST00000392632 PLEKHM2Q8IWE5 1019 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 SPICE1Q8N0Z3 855 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 RIN2Q8WYP3 895 aaPredicted RBP4.26□□□□□ -1.73
UBR3-202ENST00000392632 TMEM169Q96HH4 297 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 HACD3Q9P035 362 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 HACL1Q9UJ83 578 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 L3MBTL1Q9Y468 752 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 H3BRJ5 948 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 PSMD14O00487 310 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 TADA2AO75478 443 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 RPS6KA4O75676 772 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 RARBP10826 455 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 PHKG2P15735 406 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 RGS2P41220 211 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 ADKP55263 362 aaKnown RBP4.26□□□□□ -1.73
UBR3-202ENST00000392632 SKP1P63208 163 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 ADCY1Q08828 1119 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 SNAPC2Q13487 334 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 LAMC2Q13753 1193 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 MORC3Q14149 939 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 KRT72Q14CN4 511 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 FSCBQ5H9T9 825 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 CYP4A22Q5TCH4 519 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 ANKS6Q68DC2 871 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 CENPUQ71F23 418 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 TRIM59Q8IWR1 403 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 TAGAPQ8N103 731 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 RMDN3Q96TC7 470 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 RASSF4Q9H2L5 321 aa4.26□□□□□ -1.73
UBR3-202ENST00000392632 ACTR5Q9H9F9 607 aaPredicted RBP4.26□□□□□ -1.73
UBR3-202ENST00000392632 NHEJ1Q9H9Q4 299 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms