RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 STAT5AP42229 794 aa7.1□□□□□ -1.27
RNU6-40P-201ENST00000384254 GPR3P46089 330 aa7.1□□□□□ -1.27
RNU6-40P-201ENST00000384254 YBX1P67809 324 aaKnown RBP7.1□□□□□ -1.27
RNU6-40P-201ENST00000384254 ZNF200P98182 395 aaPredicted RBP7.1□□□□□ -1.27
RNU6-40P-201ENST00000384254 SLC6A3Q01959 620 aa7.1□□□□□ -1.27
RNU6-40P-201ENST00000384254 PDCD1Q15116 288 aa7.1□□□□□ -1.27
RNU6-40P-201ENST00000384254 TMEM240Q5SV17 173 aa7.1□□□□□ -1.27
RNU6-40P-201ENST00000384254 CCDC62Q6P9F0 684 aa7.1□□□□□ -1.27
RNU6-40P-201ENST00000384254 CD300LDQ6UXZ3 194 aa7.1□□□□□ -1.27
RNU6-40P-201ENST00000384254 CMIPQ8IY22 773 aa7.1□□□□□ -1.27
RNU6-40P-201ENST00000384254 SSH1Q8WYL5 1049 aa7.1□□□□□ -1.27
RNU6-40P-201ENST00000384254 FOXB1Q99853 325 aa7.1□□□□□ -1.27
RNU6-40P-201ENST00000384254 RTFDC1Q9BY42 306 aaPredicted RBP7.1□□□□□ -1.27
RNU6-40P-201ENST00000384254 ANO3Q9BYT9 981 aa7.1□□□□□ -1.27
RNU6-40P-201ENST00000384254 UCKL1Q9NWZ5 548 aa7.1□□□□□ -1.27
RNU6-40P-201ENST00000384254 H2AFYO75367 372 aaKnown RBP7.09□□□□□ -1.27
RNU6-40P-201ENST00000384254 PRPF6O94906 941 aaKnown RBP7.09□□□□□ -1.27
RNU6-40P-201ENST00000384254 IL33O95760 270 aa7.09□□□□□ -1.27
RNU6-40P-201ENST00000384254 PRLP01236 227 aa7.09□□□□□ -1.27
RNU6-40P-201ENST00000384254 LRG1P02750 347 aa7.09□□□□□ -1.27
RNU6-40P-201ENST00000384254 NCAM1P13591 858 aa7.09□□□□□ -1.27
RNU6-40P-201ENST00000384254 ADCY2Q08462 1091 aa7.09□□□□□ -1.27
RNU6-40P-201ENST00000384254 TARBP2Q15633 366 aaKnown RBP7.09□□□□□ -1.27
RNU6-40P-201ENST00000384254 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.09□□□□□ -1.27
RNU6-40P-201ENST00000384254 ARTNQ5T4W7 220 aa7.09□□□□□ -1.27
RNU6-40P-201ENST00000384254 FAM102BQ5T8I3 360 aa7.09□□□□□ -1.27
RNU6-40P-201ENST00000384254 ZNF605Q86T29 641 aa7.09□□□□□ -1.27
RNU6-40P-201ENST00000384254 RTN4RL1Q86UN2 441 aaPredicted RBP7.09□□□□□ -1.27
RNU6-40P-201ENST00000384254 CPA6Q8N4T0 437 aa7.09□□□□□ -1.27
RNU6-40P-201ENST00000384254 RAX2Q96IS3 184 aa7.09□□□□□ -1.27
RNU6-40P-201ENST00000384254 MYL10Q9BUA6 226 aa7.09□□□□□ -1.27
RNU6-40P-201ENST00000384254 RHOBTB2Q9BYZ6 727 aa7.09□□□□□ -1.27
RNU6-40P-201ENST00000384254 QRSL1Q9H0R6 528 aaKnown RBP7.09□□□□□ -1.27
RNU6-40P-201ENST00000384254 ZFP64Q9NPA5 681 aa7.09□□□□□ -1.27
RNU6-40P-201ENST00000384254 INCENPQ9NQS7 918 aa7.09□□□□□ -1.27
RNU6-40P-201ENST00000384254 SIRT5Q9NXA8 310 aa7.09□□□□□ -1.27
RNU6-40P-201ENST00000384254 HSPBP1Q9NZL4 362 aa7.09□□□□□ -1.27
RNU6-40P-201ENST00000384254 CLEC2LP0C7M8 214 aa7.08□□□□□ -1.28
RNU6-40P-201ENST00000384254 PF4V1P10720 104 aa7.08□□□□□ -1.28
RNU6-40P-201ENST00000384254 MC4RP32245 332 aa7.08□□□□□ -1.28
RNU6-40P-201ENST00000384254 MANFP55145 182 aaKnown RBP7.08□□□□□ -1.28
RNU6-40P-201ENST00000384254 ALDH6A1Q02252 535 aaKnown RBP7.08□□□□□ -1.28
RNU6-40P-201ENST00000384254 MLC1Q15049 377 aa7.08□□□□□ -1.28
RNU6-40P-201ENST00000384254 CT83Q5H943 113 aa7.08□□□□□ -1.28
RNU6-40P-201ENST00000384254 NXNQ6DKJ4 435 aa7.08□□□□□ -1.28
RNU6-40P-201ENST00000384254 CXorf57Q6NSI4 855 aaKnown RBP7.08□□□□□ -1.28
RNU6-40P-201ENST00000384254 KIAA1841Q6NSI8 718 aa7.08□□□□□ -1.28
RNU6-40P-201ENST00000384254 CCAR1Q8IX12 1150 aaKnown RBP7.08□□□□□ -1.28
RNU6-40P-201ENST00000384254 TCEAL8Q8IYN2 117 aa7.08□□□□□ -1.28
RNU6-40P-201ENST00000384254 IGDCC4Q8TDY8 1250 aa7.08□□□□□ -1.28
RNU6-40P-201ENST00000384254 FOXRED1Q96CU9 486 aaPredicted RBP7.08□□□□□ -1.28
RNU6-40P-201ENST00000384254 RNF38Q9H0F5 515 aa7.08□□□□□ -1.28
RNU6-40P-201ENST00000384254 PCDH18Q9HCL0 1135 aa7.08□□□□□ -1.28
RNU6-40P-201ENST00000384254 TCF7L1Q9HCS4 588 aa7.08□□□□□ -1.28
RNU6-40P-201ENST00000384254 SLC39A2Q9NP94 309 aa7.08□□□□□ -1.28
RNU6-40P-201ENST00000384254 BTBD7Q9P203 1132 aa7.08□□□□□ -1.28
RNU6-40P-201ENST00000384254 PNMA8BQ9ULN7 279 aaPredicted RBP7.08□□□□□ -1.28
RNU6-40P-201ENST00000384254 PPP2R3BQ9Y5P8 575 aa7.08□□□□□ -1.28
RNU6-40P-201ENST00000384254 ZNF839A8K0R7 811 aa7.07□□□□□ -1.28
RNU6-40P-201ENST00000384254 FZD9O00144 591 aa7.07□□□□□ -1.28
RNU6-40P-201ENST00000384254 ASGR2P07307 311 aa7.07□□□□□ -1.28
RNU6-40P-201ENST00000384254 CYP2C8P10632 490 aa7.07□□□□□ -1.28
RNU6-40P-201ENST00000384254 PFKLP17858 780 aa7.07□□□□□ -1.28
RNU6-40P-201ENST00000384254 VIPR1P32241 457 aa7.07□□□□□ -1.28
RNU6-40P-201ENST00000384254 SLC5A3P53794 718 aa7.07□□□□□ -1.28
RNU6-40P-201ENST00000384254 BCAR1P56945 870 aa7.07□□□□□ -1.28
RNU6-40P-201ENST00000384254 TBX4P57082 545 aa7.07□□□□□ -1.28
RNU6-40P-201ENST00000384254 SRSF2Q01130 221 aaKnown RBP7.07□□□□□ -1.28
RNU6-40P-201ENST00000384254 CACNB2Q08289 660 aaPredicted RBP7.07□□□□□ -1.28
RNU6-40P-201ENST00000384254 GFOD2Q3B7J2 385 aa7.07□□□□□ -1.28
RNU6-40P-201ENST00000384254 TOR2AQ5JU69 321 aa7.07□□□□□ -1.28
RNU6-40P-201ENST00000384254 TMEM132EQ6IEE7 984 aa7.07□□□□□ -1.28
RNU6-40P-201ENST00000384254 CPA5Q8WXQ8 436 aa7.07□□□□□ -1.28
RNU6-40P-201ENST00000384254 EAF2Q96CJ1 260 aaPredicted RBP7.07□□□□□ -1.28
RNU6-40P-201ENST00000384254 HSPBAP1Q96EW2 488 aa7.07□□□□□ -1.28
RNU6-40P-201ENST00000384254 TMEM209Q96SK2 561 aa7.07□□□□□ -1.28
RNU6-40P-201ENST00000384254 ORAI2Q96SN7 254 aa7.07□□□□□ -1.28
RNU6-40P-201ENST00000384254 ZNF552Q9H707 407 aaPredicted RBP7.07□□□□□ -1.28
RNU6-40P-201ENST00000384254 EDARQ9UNE0 448 aa7.07□□□□□ -1.28
RNU6-40P-201ENST00000384254 GPR45Q9Y5Y3 372 aa7.07□□□□□ -1.28
RNU6-40P-201ENST00000384254 CYP2C19P33261 490 aa7.06□□□□□ -1.28
RNU6-40P-201ENST00000384254 MRPS9P82933 396 aaKnown RBP7.06□□□□□ -1.28
RNU6-40P-201ENST00000384254 SRSF3P84103 164 aaKnown RBP7.06□□□□□ -1.28
RNU6-40P-201ENST00000384254 PFKPQ01813 784 aa7.06□□□□□ -1.28
RNU6-40P-201ENST00000384254 CR1LQ2VPA4 569 aa7.06□□□□□ -1.28
RNU6-40P-201ENST00000384254 TMC5Q6UXY8 1006 aa7.06□□□□□ -1.28
RNU6-40P-201ENST00000384254 CBLL1Q75N03 491 aa7.06□□□□□ -1.28
RNU6-40P-201ENST00000384254 CCDC146Q8IYE0 955 aa7.06□□□□□ -1.28
RNU6-40P-201ENST00000384254 MAGEB6Q8N7X4 407 aa7.06□□□□□ -1.28
RNU6-40P-201ENST00000384254 RSAD2Q8WXG1 361 aa7.06□□□□□ -1.28
RNU6-40P-201ENST00000384254 AUTS2Q8WXX7 1259 aa7.06□□□□□ -1.28
RNU6-40P-201ENST00000384254 TEKT5Q96M29 485 aa7.06□□□□□ -1.28
RNU6-40P-201ENST00000384254 NUP88Q99567 741 aaPredicted RBP7.06□□□□□ -1.28
RNU6-40P-201ENST00000384254 CSRNP2Q9H175 543 aa7.06□□□□□ -1.28
RNU6-40P-201ENST00000384254 SEMA4AQ9H3S1 761 aa7.06□□□□□ -1.28
RNU6-40P-201ENST00000384254 DLL4Q9NR61 685 aa7.06□□□□□ -1.28
RNU6-40P-201ENST00000384254 GALNT8Q9NY28 637 aa7.06□□□□□ -1.28
RNU6-40P-201ENST00000384254 OAS3Q9Y6K5 1087 aaKnown RBP7.06□□□□□ -1.28
RNU6-40P-201ENST00000384254 PRSS38A1L453 326 aa7.05□□□□□ -1.28
RNU6-40P-201ENST00000384254 APEX1P27695 318 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms