RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 CDKAL1Q5VV42 579 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 TRIM68Q6AZZ1 485 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 VCXQ9H320 206 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 PXDNQ92626 1479 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 CLRN2A0PK11 232 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 CHUKO15111 745 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 POLR2BP30876 1174 aaKnown RBP13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 KLK7P49862 253 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 YWHAEP62258 255 aaKnown RBP13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 PPP2R2AP63151 447 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 ZNF211Q13398 564 aaPredicted RBP13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 TRIP13Q15645 432 aaPredicted RBP13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 NUGGCQ68CJ6 796 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 NLRP14Q86W24 1093 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 ADGRF4Q8IZF3 695 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 ERGIC2Q96RQ1 377 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 AMACRQ9UHK6 382 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 NOC2LQ9Y3T9 749 aaKnown RBP13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 PIK3CAP42336 1068 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 CACNB3P54284 484 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 TMEM179Q6ZVK1 233 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 GLG1Q92896 1179 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 SLITRK6Q9H5Y7 841 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 KMT5AQ9NQR1 393 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 DNAJC17Q9NVM6 304 aaKnown RBP13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 SMARCAL1Q9NZC9 954 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 TRPC6Q9Y210 931 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 GINS2Q9Y248 185 aa13.74□□□□□ -0.21
DNMT3A-204ENST00000380756 STAT3P40763 770 aa13.73□□□□□ -0.21
DNMT3A-204ENST00000380756 DRAP1Q14919 205 aaPredicted RBP13.73□□□□□ -0.21
DNMT3A-204ENST00000380756 NKX1-1Q15270 411 aaPredicted RBP13.73□□□□□ -0.21
DNMT3A-204ENST00000380756 MUM1Q2TAK8 710 aa13.73□□□□□ -0.21
DNMT3A-204ENST00000380756 SDCCAG8Q86SQ7 713 aaPredicted RBP13.73□□□□□ -0.21
DNMT3A-204ENST00000380756 GLYCTKQ8IVS8 523 aa13.73□□□□□ -0.21
DNMT3A-204ENST00000380756 RBM12Q9NTZ6 932 aaKnown RBP13.73□□□□□ -0.21
DNMT3A-204ENST00000380756 PLAGL2Q9UPG8 496 aa13.73□□□□□ -0.21
DNMT3A-204ENST00000380756 STXBP3O00186 592 aa13.73□□□□□ -0.21
DNMT3A-204ENST00000380756 DAPK3O43293 454 aa13.73□□□□□ -0.21
DNMT3A-204ENST00000380756 CAMTA2O94983 1202 aa13.73□□□□□ -0.21
DNMT3A-204ENST00000380756 RSRC2Q7L4I2 434 aaKnown RBP13.73□□□□□ -0.21
DNMT3A-204ENST00000380756 ATP6V0A1Q93050 837 aa13.73□□□□□ -0.21
DNMT3A-204ENST00000380756 ANKFY1Q9P2R3 1169 aa13.73□□□□□ -0.21
DNMT3A-204ENST00000380756 FBXL5Q9UKA1 691 aa13.73□□□□□ -0.21
DNMT3A-204ENST00000380756 PCDHB4Q9Y5E5 795 aa13.73□□□□□ -0.21
DNMT3A-204ENST00000380756 GJA3Q9Y6H8 435 aa13.73□□□□□ -0.21
DNMT3A-204ENST00000380756 ECM2O94769 699 aaPredicted RBP13.73□□□□□ -0.21
DNMT3A-204ENST00000380756 AKR1B1P15121 316 aa13.73□□□□□ -0.21
DNMT3A-204ENST00000380756 POLGP54098 1239 aaPredicted RBP13.73□□□□□ -0.21
DNMT3A-204ENST00000380756 WDR93Q6P2C0 686 aa13.73□□□□□ -0.21
DNMT3A-204ENST00000380756 GOLGA8IPA6NC78 632 aa13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 GOLGA8JA6NMD2 632 aa13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 FAM196BA6NMK8 535 aa13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 RNF8O76064 485 aa13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 IRAK1P51617 712 aa13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 SNX16P57768 344 aa13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 APBB1IPQ7Z5R6 666 aaPredicted RBP13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 DCAF4Q8WV16 495 aa13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 EIF3HO15372 352 aaKnown RBP eCLIP13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 SORBS3O60504 671 aa13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 STAM2O75886 525 aa13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 GH2P01242 217 aa13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 KRT14P02533 472 aa13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 GCKP35557 465 aa13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 RASA3Q14644 834 aa13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 TMED2Q15363 201 aa13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 MAP7D1Q3KQU3 841 aa13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 TRAPPC11Q7Z392 1133 aa13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 TBC1D1Q86TI0 1168 aaPredicted RBP13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 CEP170P1Q96L14 293 aa13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 MRPL47Q9HD33 250 aaKnown RBP13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 A0A1W2PQJ5 194 aa13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 GCLMP48507 274 aa13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 SLC8A3P57103 927 aa13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 ALCAMQ13740 583 aa13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 SEC23AQ15436 765 aa13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 KCNQ2O43526 872 aa13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 STK10O94804 968 aaKnown RBP13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 USP11P51784 963 aa13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 GPC5P78333 572 aa13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 FRMD5Q7Z6J6 570 aa13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 PHLDB2Q86SQ0 1253 aa13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 NIM1KQ8IY84 436 aa13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 RFFLQ8WZ73 363 aa13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 LACRTQ9GZZ8 138 aa13.72□□□□□ -0.21
DNMT3A-204ENST00000380756 SGK1O00141 431 aa13.71□□□□□ -0.21
DNMT3A-204ENST00000380756 NTSR2O95665 410 aa13.71□□□□□ -0.21
DNMT3A-204ENST00000380756 SARSP49591 514 aaKnown RBP13.71□□□□□ -0.21
DNMT3A-204ENST00000380756 SPATA24Q86W54 205 aa13.71□□□□□ -0.21
DNMT3A-204ENST00000380756 MMGT1Q8N4V1 131 aa13.71□□□□□ -0.21
DNMT3A-204ENST00000380756 GDAP1Q8TB36 358 aa13.71□□□□□ -0.21
DNMT3A-204ENST00000380756 ATP2A3Q93084 1043 aa13.71□□□□□ -0.21
DNMT3A-204ENST00000380756 FAM81BQ96LP2 452 aa13.71□□□□□ -0.21
DNMT3A-204ENST00000380756 DNAJC7Q99615 494 aa13.71□□□□□ -0.21
DNMT3A-204ENST00000380756 PNMA2Q9UL42 364 aa13.71□□□□□ -0.21
DNMT3A-204ENST00000380756 EXOC1LA0A1B0GW35 172 aa13.71□□□□□ -0.21
DNMT3A-204ENST00000380756 FRMD3A2A2Y4 597 aa13.71□□□□□ -0.21
DNMT3A-204ENST00000380756 TMEM191BP0C7N4 346 aa13.71□□□□□ -0.21
DNMT3A-204ENST00000380756 SESN3P58005 492 aa13.71□□□□□ -0.21
DNMT3A-204ENST00000380756 TNFAIP1Q13829 316 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms