RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 CGREF1Q99674 301 aa10.12□□□□□ -0.79
PTPRA-204ENST00000380393 NSRP1Q9H0G5 558 aaKnown RBP10.12□□□□□ -0.79
PTPRA-204ENST00000380393 TBCCD1Q9NVR7 557 aa10.12□□□□□ -0.79
PTPRA-204ENST00000380393 SMARCAL1Q9NZC9 954 aa10.12□□□□□ -0.79
PTPRA-204ENST00000380393 AHDC1Q5TGY3 1603 aaPredicted RBP10.12□□□□□ -0.79
PTPRA-204ENST00000380393 JCADQ9P266 1359 aa10.12□□□□□ -0.79
PTPRA-204ENST00000380393 TBCAO75347 108 aaKnown RBP10.12□□□□□ -0.79
PTPRA-204ENST00000380393 CTNNA1P35221 906 aaKnown RBP10.12□□□□□ -0.79
PTPRA-204ENST00000380393 ARFIP2P53365 341 aa10.12□□□□□ -0.79
PTPRA-204ENST00000380393 MSLNQ13421 630 aaPredicted RBP10.12□□□□□ -0.79
PTPRA-204ENST00000380393 KPNB1Q14974 876 aaKnown RBP10.12□□□□□ -0.79
PTPRA-204ENST00000380393 RETREG2Q8NC44 543 aa10.12□□□□□ -0.79
PTPRA-204ENST00000380393 ETNK1Q9HBU6 452 aa10.12□□□□□ -0.79
PTPRA-204ENST00000380393 TRPC7Q9HCX4 862 aa10.12□□□□□ -0.79
PTPRA-204ENST00000380393 PNMA3Q9UL41 463 aa10.12□□□□□ -0.79
PTPRA-204ENST00000380393 REXO2Q9Y3B8 237 aaKnown RBP10.12□□□□□ -0.79
PTPRA-204ENST00000380393 ATP6V0A2Q9Y487 856 aa10.12□□□□□ -0.79
PTPRA-204ENST00000380393 ANO9A1A5B4 782 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 KRT86O43790 486 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 HEXIM1O94992 359 aaKnown RBP10.11□□□□□ -0.79
PTPRA-204ENST00000380393 LDHCP07864 332 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 FAM209AQ5JX71 171 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 CREG2Q8IUH2 290 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 LRRC49Q8IUZ0 686 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 KCTD17Q8N5Z5 321 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 GABPB2Q8TAK5 448 aaPredicted RBP10.11□□□□□ -0.79
PTPRA-204ENST00000380393 HSPBAP1Q96EW2 488 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 ZNF317Q96PQ6 595 aaPredicted RBP10.11□□□□□ -0.79
PTPRA-204ENST00000380393 PSMB7Q99436 277 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 FAIMQ9NVQ4 179 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 STOML1Q9UBI4 398 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 MTUS1Q9ULD2 1270 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 TTLL13PA6NNM8 815 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 DCDC2CA8MYV0 355 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 PTCD1O75127 700 aaKnown RBP10.11□□□□□ -0.79
PTPRA-204ENST00000380393 GLI1P08151 1106 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 MSL3P1P0C860 447 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 PPIDQ08752 370 aaKnown RBP10.11□□□□□ -0.79
PTPRA-204ENST00000380393 DCTN2Q13561 401 aaKnown RBP10.11□□□□□ -0.79
PTPRA-204ENST00000380393 LRIG3Q6UXM1 1119 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 IFNL2Q8IZJ0 200 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 LRRC8CQ8TDW0 803 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 ABHD10Q9NUJ1 306 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 PCDHA5Q9Y5H7 936 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 ABCA3Q99758 1704 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 CEMIPQ8WUJ3 1361 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 MYH15Q9Y2K3 1946 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 TEX28O15482 410 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 TTI1O43156 1089 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 LYNP07948 512 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 ENPP1P22413 925 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 TKTP29401 623 aaKnown RBP10.11□□□□□ -0.79
PTPRA-204ENST00000380393 RXRGP48443 463 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 KRT32Q14532 448 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 GPR162Q16538 588 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 CHADLQ6NUI6 762 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 CATIPQ7Z7H3 387 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 PBKQ96KB5 322 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 CHP1Q99653 195 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 SELENOSQ9BQE4 189 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 CEP44Q9C0F1 390 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 GBA3Q9H227 469 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 BHMT2Q9H2M3 363 aa10.11□□□□□ -0.79
PTPRA-204ENST00000380393 CNOT10Q9H9A5 744 aaKnown RBP10.11□□□□□ -0.79
PTPRA-204ENST00000380393 PCDH11XQ9BZA7 1347 aa10.1□□□□□ -0.79
PTPRA-204ENST00000380393 KANSL1LA0AUZ9 987 aa10.1□□□□□ -0.79
PTPRA-204ENST00000380393 MACROD2A1Z1Q3 448 aa10.1□□□□□ -0.79
PTPRA-204ENST00000380393 CMA1P23946 247 aa10.1□□□□□ -0.79
PTPRA-204ENST00000380393 IGHMBP2P38935 993 aaKnown RBP10.1□□□□□ -0.79
PTPRA-204ENST00000380393 PAFAH1B1P43034 410 aa10.1□□□□□ -0.79
PTPRA-204ENST00000380393 KIF11P52732 1056 aa10.1□□□□□ -0.79
PTPRA-204ENST00000380393 ZNF844Q08AG5 666 aa10.1□□□□□ -0.79
PTPRA-204ENST00000380393 HLTFQ14527 1009 aaKnown RBP eCLIP10.1□□□□□ -0.79
PTPRA-204ENST00000380393 PARP10Q53GL7 1025 aa10.1□□□□□ -0.79
PTPRA-204ENST00000380393 ZFYVE27Q5T4F4 411 aa10.1□□□□□ -0.79
PTPRA-204ENST00000380393 DAB2IPQ5VWQ8 1189 aa10.1□□□□□ -0.79
PTPRA-204ENST00000380393 MARK2Q7KZI7 788 aaKnown RBP10.1□□□□□ -0.79
PTPRA-204ENST00000380393 ZNF804AQ7Z570 1209 aa10.1□□□□□ -0.79
PTPRA-204ENST00000380393 ENOX1Q8TC92 643 aaKnown RBP10.1□□□□□ -0.79
PTPRA-204ENST00000380393 DIS3LQ8TF46 1054 aaKnown RBP10.1□□□□□ -0.79
PTPRA-204ENST00000380393 SCG3Q8WXD2 468 aaKnown RBP10.1□□□□□ -0.79
PTPRA-204ENST00000380393 IRGQQ8WZA9 623 aa10.1□□□□□ -0.79
PTPRA-204ENST00000380393 EHD2Q9NZN4 543 aa10.1□□□□□ -0.79
PTPRA-204ENST00000380393 NOX1Q9Y5S8 564 aa10.1□□□□□ -0.79
PTPRA-204ENST00000380393 ABCC6O95255 1503 aa10.1□□□□□ -0.79
PTPRA-204ENST00000380393 FBP2O00757 339 aa10.1□□□□□ -0.79
PTPRA-204ENST00000380393 TAF5LO75529 589 aa10.1□□□□□ -0.79
PTPRA-204ENST00000380393 MTRF1O75570 445 aaKnown RBP10.1□□□□□ -0.79
PTPRA-204ENST00000380393 CYP21A2P08686 494 aa10.1□□□□□ -0.79
PTPRA-204ENST00000380393 GALNTL6Q49A17 601 aa10.1□□□□□ -0.79
PTPRA-204ENST00000380393 AGBL2Q5U5Z8 902 aa10.1□□□□□ -0.79
PTPRA-204ENST00000380393 MAMSTRQ6ZN01 415 aa10.1□□□□□ -0.79
PTPRA-204ENST00000380393 ASRGL1Q7L266 308 aa10.1□□□□□ -0.79
PTPRA-204ENST00000380393 SAP30BPQ9UHR5 308 aaKnown RBP10.1□□□□□ -0.79
PTPRA-204ENST00000380393 TRIM17Q9Y577 477 aa10.1□□□□□ -0.79
PTPRA-204ENST00000380393 IVNS1ABPQ9Y6Y0 642 aa10.1□□□□□ -0.79
PTPRA-204ENST00000380393 NPHP3-ACAD11A0A0J9YXS1 232 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 CPLX1O14810 134 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 ADCY3O60266 1144 aa10.09□□□□□ -0.79
PTPRA-204ENST00000380393 CDC25AP30304 524 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms