RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 PROCA1Q8NCQ7 364 aaPredicted RBP13.3□□□□□ -0.28
RFC3-201ENST00000380071 CASKIN2Q8WXE0 1202 aa13.3□□□□□ -0.28
RFC3-201ENST00000380071 TSPYL1Q9H0U9 437 aa13.3□□□□□ -0.28
RFC3-201ENST00000380071 PRR12Q9ULL5 1215 aa13.3□□□□□ -0.28
RFC3-201ENST00000380071 SCN9AQ15858 1988 aa13.3□□□□□ -0.28
RFC3-201ENST00000380071 IGLV3-22A0A075B6J6 115 aa13.3□□□□□ -0.28
RFC3-201ENST00000380071 VGLL3A8MV65 326 aa13.3□□□□□ -0.28
RFC3-201ENST00000380071 SHOX2O60902 331 aaPredicted RBP13.3□□□□□ -0.28
RFC3-201ENST00000380071 HSF2BPO75031 334 aa13.3□□□□□ -0.28
RFC3-201ENST00000380071 SLITRK3O94933 977 aa13.3□□□□□ -0.28
RFC3-201ENST00000380071 EYA4O95677 639 aa13.3□□□□□ -0.28
RFC3-201ENST00000380071 ECE1P42892 770 aa13.3□□□□□ -0.28
RFC3-201ENST00000380071 IRAK1P51617 712 aa13.3□□□□□ -0.28
RFC3-201ENST00000380071 GUCY2FP51841 1108 aa13.3□□□□□ -0.28
RFC3-201ENST00000380071 RPS6KA1Q15418 735 aa13.3□□□□□ -0.28
RFC3-201ENST00000380071 BMT2Q1RMZ1 405 aa13.3□□□□□ -0.28
RFC3-201ENST00000380071 DNAJC21Q5F1R6 531 aaKnown RBP13.3□□□□□ -0.28
RFC3-201ENST00000380071 KIAA1755Q5JYT7 1200 aa13.3□□□□□ -0.28
RFC3-201ENST00000380071 TPH2Q8IWU9 490 aa13.3□□□□□ -0.28
RFC3-201ENST00000380071 KLHL7Q8IXQ5 586 aa13.3□□□□□ -0.28
RFC3-201ENST00000380071 USP38Q8NB14 1042 aa13.3□□□□□ -0.28
RFC3-201ENST00000380071 POLR3CQ9BUI4 534 aaPredicted RBP13.3□□□□□ -0.28
RFC3-201ENST00000380071 WDR18Q9BV38 432 aa13.3□□□□□ -0.28
RFC3-201ENST00000380071 BTNL10A8MVZ5 291 aa13.29□□□□□ -0.28
RFC3-201ENST00000380071 GOLGA8KD6RF30 607 aa13.29□□□□□ -0.28
RFC3-201ENST00000380071 RAD51CO43502 376 aa13.29□□□□□ -0.28
RFC3-201ENST00000380071 CHMP2AO43633 222 aa13.29□□□□□ -0.28
RFC3-201ENST00000380071 TBCAO75347 108 aaKnown RBP13.29□□□□□ -0.28
RFC3-201ENST00000380071 KRT14P02533 472 aa13.29□□□□□ -0.28
RFC3-201ENST00000380071 EPB41P11171 864 aaKnown RBP13.29□□□□□ -0.28
RFC3-201ENST00000380071 UBXN2AP68543 259 aa13.29□□□□□ -0.28
RFC3-201ENST00000380071 COG2Q14746 738 aa13.29□□□□□ -0.28
RFC3-201ENST00000380071 RBM26Q5T8P6 1007 aaKnown RBP13.29□□□□□ -0.28
RFC3-201ENST00000380071 ALS2CLQ60I27 953 aa13.29□□□□□ -0.28
RFC3-201ENST00000380071 MSL1Q68DK7 614 aa13.29□□□□□ -0.28
RFC3-201ENST00000380071 GBP6Q6ZN66 633 aa13.29□□□□□ -0.28
RFC3-201ENST00000380071 OTOP1Q7RTM1 612 aa13.29□□□□□ -0.28
RFC3-201ENST00000380071 CCDC43Q96MW1 224 aaKnown RBP13.29□□□□□ -0.28
RFC3-201ENST00000380071 HSD17B14Q9BPX1 270 aa13.29□□□□□ -0.28
RFC3-201ENST00000380071 RABEP2Q9H5N1 569 aa13.29□□□□□ -0.28
RFC3-201ENST00000380071 QTRT2Q9H974 415 aaKnown RBP13.29□□□□□ -0.28
RFC3-201ENST00000380071 OPA1O60313 960 aa13.29□□□□□ -0.28
RFC3-201ENST00000380071 PPFIA4O75335 1185 aa13.29□□□□□ -0.28
RFC3-201ENST00000380071 KIF4AO95239 1232 aa13.29□□□□□ -0.28
RFC3-201ENST00000380071 CFBP00751 764 aa13.29□□□□□ -0.28
RFC3-201ENST00000380071 CYP3A4P08684 503 aa13.29□□□□□ -0.28
RFC3-201ENST00000380071 RPL13P26373 211 aaKnown RBP13.29□□□□□ -0.28
RFC3-201ENST00000380071 JAM2P57087 298 aa13.29□□□□□ -0.28
RFC3-201ENST00000380071 MCTP2Q6DN12 878 aa13.29□□□□□ -0.28
RFC3-201ENST00000380071 MYCT1Q8N699 235 aa13.29□□□□□ -0.28
RFC3-201ENST00000380071 LRRC57Q8N9N7 239 aa13.29□□□□□ -0.28
RFC3-201ENST00000380071 BORCS6Q96GS4 357 aa13.29□□□□□ -0.28
RFC3-201ENST00000380071 DYDC2Q96IM9 177 aa13.29□□□□□ -0.28
RFC3-201ENST00000380071 PRMT6Q96LA8 375 aaPredicted RBP13.29□□□□□ -0.28
RFC3-201ENST00000380071 RASSF4Q9H2L5 321 aa13.29□□□□□ -0.28
RFC3-201ENST00000380071 GCNT4Q9P109 453 aa13.29□□□□□ -0.28
RFC3-201ENST00000380071 TMEM59LQ9UK28 342 aa13.29□□□□□ -0.28
RFC3-201ENST00000380071 BZW2Q9Y6E2 419 aaKnown RBP13.29□□□□□ -0.28
RFC3-201ENST00000380071 FAM170AA1A519 330 aa13.28□□□□□ -0.28
RFC3-201ENST00000380071 PRKCIP41743 596 aa13.28□□□□□ -0.28
RFC3-201ENST00000380071 PPFIA1Q13136 1202 aa13.28□□□□□ -0.28
RFC3-201ENST00000380071 C10orf76Q5T2E6 689 aa13.28□□□□□ -0.28
RFC3-201ENST00000380071 KCTD16Q68DU8 428 aa13.28□□□□□ -0.28
RFC3-201ENST00000380071 BTNL9Q6UXG8 535 aa13.28□□□□□ -0.28
RFC3-201ENST00000380071 IQCKQ8N0W5 287 aa13.28□□□□□ -0.28
RFC3-201ENST00000380071 PIK3R5Q8WYR1 880 aa13.28□□□□□ -0.28
RFC3-201ENST00000380071 TAF4BQ92750 862 aa13.28□□□□□ -0.28
RFC3-201ENST00000380071 RUFY1Q96T51 708 aa13.28□□□□□ -0.28
RFC3-201ENST00000380071 METTL14Q9HCE5 456 aaKnown RBP13.28□□□□□ -0.28
RFC3-201ENST00000380071 COL11A2P13942 1736 aaPredicted RBP13.28□□□□□ -0.28
RFC3-201ENST00000380071 DDX3XO00571 662 aaKnown RBP eCLIP13.28□□□□□ -0.281e-11■■□□□ 12.4
RFC3-201ENST00000380071 CEP104O60308 925 aa13.28□□□□□ -0.28
RFC3-201ENST00000380071 GFPT2O94808 682 aa13.28□□□□□ -0.28
RFC3-201ENST00000380071 HDLBPQ00341 1268 aaKnown RBP13.28□□□□□ -0.28
RFC3-201ENST00000380071 NNTQ13423 1086 aa13.28□□□□□ -0.28
RFC3-201ENST00000380071 C1orf186Q6ZWK4 172 aa13.28□□□□□ -0.28
RFC3-201ENST00000380071 KRT27Q7Z3Y8 459 aa13.28□□□□□ -0.28
RFC3-201ENST00000380071 SH2D3CQ8N5H7 860 aa13.28□□□□□ -0.28
RFC3-201ENST00000380071 TPCN2Q8NHX9 752 aa13.28□□□□□ -0.28
RFC3-201ENST00000380071 AP1M1Q9BXS5 423 aa13.28□□□□□ -0.28
RFC3-201ENST00000380071 CAPS2Q9BXY5 557 aa13.28□□□□□ -0.28
RFC3-201ENST00000380071 NENFQ9UMX5 172 aa13.28□□□□□ -0.28
RFC3-201ENST00000380071 ZMYM2Q9UBW7 1377 aa13.28□□□□□ -0.28
RFC3-201ENST00000380071 ZNF233A6NK53 670 aa13.27□□□□□ -0.29
RFC3-201ENST00000380071 PIK3CDO00329 1044 aa13.27□□□□□ -0.29
RFC3-201ENST00000380071 SLC16A3O15427 465 aaKnown RBP13.27□□□□□ -0.29
RFC3-201ENST00000380071 FAM13AO94988 1023 aa13.27□□□□□ -0.29
RFC3-201ENST00000380071 ZBTB48P10074 688 aaPredicted RBP13.27□□□□□ -0.29
RFC3-201ENST00000380071 PAK2Q13177 524 aa13.27□□□□□ -0.29
RFC3-201ENST00000380071 AOC3Q16853 763 aa13.27□□□□□ -0.29
RFC3-201ENST00000380071 CCDC174Q6PII3 467 aa13.27□□□□□ -0.29
RFC3-201ENST00000380071 METTL13Q8N6R0 699 aa13.27□□□□□ -0.29
RFC3-201ENST00000380071 ACER1Q8TDN7 264 aa13.27□□□□□ -0.29
RFC3-201ENST00000380071 CSRNP1Q96S65 589 aa13.27□□□□□ -0.29
RFC3-201ENST00000380071 OLFML3Q9NRN5 406 aa13.27□□□□□ -0.29
RFC3-201ENST00000380071 WRAP73Q9P2S5 460 aaPredicted RBP13.27□□□□□ -0.29
RFC3-201ENST00000380071 SERPINA10Q9UK55 444 aa13.27□□□□□ -0.29
RFC3-201ENST00000380071 STK24Q9Y6E0 443 aa13.27□□□□□ -0.29
RFC3-201ENST00000380071 NPM3O75607 178 aaKnown RBP13.27□□□□□ -0.29
RFC3-201ENST00000380071 PSMD10O75832 226 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms