RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 MMP1P03956 469 aa18.96■□□□□ 0.63
HMGN4-201ENST00000377575 OATP04181 439 aa18.96■□□□□ 0.63
HMGN4-201ENST00000377575 TMEM62Q0P6H9 643 aa18.96■□□□□ 0.63
HMGN4-201ENST00000377575 ST3GAL1Q11201 340 aa18.96■□□□□ 0.63
HMGN4-201ENST00000377575 FAM117BQ6P1L5 589 aa18.96■□□□□ 0.63
HMGN4-201ENST00000377575 TRMT1LQ7Z2T5 733 aaKnown RBP18.96■□□□□ 0.63
HMGN4-201ENST00000377575 CCDC83Q8IWF9 413 aa18.96■□□□□ 0.63
HMGN4-201ENST00000377575 GJA10Q969M2 543 aa18.96■□□□□ 0.63
HMGN4-201ENST00000377575 FAM20AQ96MK3 541 aa18.96■□□□□ 0.63
HMGN4-201ENST00000377575 LLPHQ9BRT6 129 aaKnown RBP18.96■□□□□ 0.63
HMGN4-201ENST00000377575 INSL6Q9Y581 213 aa18.96■□□□□ 0.63
HMGN4-201ENST00000377575 UNC80Q8N2C7 3258 aa18.96■□□□□ 0.63
HMGN4-201ENST00000377575 RALGAPA2Q2PPJ7 1873 aa18.96■□□□□ 0.63
HMGN4-201ENST00000377575 KDM3AQ9Y4C1 1321 aa18.96■□□□□ 0.63
HMGN4-201ENST00000377575 LCHNA4D1U4 455 aa18.95■□□□□ 0.62
HMGN4-201ENST00000377575 MAGEB2O15479 319 aa18.95■□□□□ 0.62
HMGN4-201ENST00000377575 C22orf31O95567 290 aa18.95■□□□□ 0.62
HMGN4-201ENST00000377575 IGFBP4P22692 258 aa18.95■□□□□ 0.62
HMGN4-201ENST00000377575 C1QBPQ07021 282 aaKnown RBP18.95■□□□□ 0.62
HMGN4-201ENST00000377575 NR5A1Q13285 461 aa18.95■□□□□ 0.62
HMGN4-201ENST00000377575 KIF2CQ99661 725 aa18.95■□□□□ 0.62
HMGN4-201ENST00000377575 FTHL17Q9BXU8 183 aa18.95■□□□□ 0.62
HMGN4-201ENST00000377575 CELF4Q9BZC1 486 aaKnown RBP18.95■□□□□ 0.62
HMGN4-201ENST00000377575 KCNMB3Q9NPA1 279 aa18.95■□□□□ 0.62
HMGN4-201ENST00000377575 NRBP2Q9NSY0 501 aa18.95■□□□□ 0.62
HMGN4-201ENST00000377575 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.94■□□□□ 0.62
HMGN4-201ENST00000377575 TBX3O15119 743 aa18.94■□□□□ 0.62
HMGN4-201ENST00000377575 MARCH6O60337 910 aa18.94■□□□□ 0.62
HMGN4-201ENST00000377575 FOSBP53539 338 aa18.94■□□□□ 0.62
HMGN4-201ENST00000377575 PAK2Q13177 524 aa18.94■□□□□ 0.62
HMGN4-201ENST00000377575 RABEP1Q15276 862 aa18.94■□□□□ 0.62
HMGN4-201ENST00000377575 UGCGQ16739 394 aa18.94■□□□□ 0.62
HMGN4-201ENST00000377575 KRT40Q6A162 431 aa18.94■□□□□ 0.62
HMGN4-201ENST00000377575 B3GNT9Q6UX72 402 aa18.94■□□□□ 0.62
HMGN4-201ENST00000377575 DIS3L2Q8IYB7 885 aaKnown RBP18.94■□□□□ 0.62
HMGN4-201ENST00000377575 METTL13Q8N6R0 699 aa18.94■□□□□ 0.62
HMGN4-201ENST00000377575 ARNTL2Q8WYA1 636 aa18.94■□□□□ 0.62
HMGN4-201ENST00000377575 TNFRSF25Q93038 417 aa18.94■□□□□ 0.62
HMGN4-201ENST00000377575 TOP1MTQ969P6 601 aa18.94■□□□□ 0.62
HMGN4-201ENST00000377575 YME1L1Q96TA2 773 aa18.94■□□□□ 0.62
HMGN4-201ENST00000377575 CERS4Q9HA82 394 aa18.94■□□□□ 0.62
HMGN4-201ENST00000377575 PRUNE2Q8WUY3 3088 aa18.94■□□□□ 0.62
HMGN4-201ENST00000377575 TTC3P53804 2025 aa18.93■□□□□ 0.62
HMGN4-201ENST00000377575 ZNF862O60290 1169 aa18.93■□□□□ 0.62
HMGN4-201ENST00000377575 ARHGEF15O94989 841 aa18.93■□□□□ 0.62
HMGN4-201ENST00000377575 TMOD1P28289 359 aa18.93■□□□□ 0.62
HMGN4-201ENST00000377575 CD52P31358 61 aa18.93■□□□□ 0.62
HMGN4-201ENST00000377575 HMGN5P82970 282 aaKnown RBP18.93■□□□□ 0.62
HMGN4-201ENST00000377575 HTRA4P83105 476 aaPredicted RBP18.93■□□□□ 0.62
HMGN4-201ENST00000377575 PPP2R5CQ13362 524 aa18.93■□□□□ 0.62
HMGN4-201ENST00000377575 ADGRE1Q14246 886 aa18.93■□□□□ 0.62
HMGN4-201ENST00000377575 SAFBQ15424 915 aaKnown RBP eCLIP18.93■□□□□ 0.62
HMGN4-201ENST00000377575 EARS2Q5JPH6 523 aaKnown RBP18.93■□□□□ 0.62
HMGN4-201ENST00000377575 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.93■□□□□ 0.62
HMGN4-201ENST00000377575 KIAA0319LQ8IZA0 1049 aa18.93■□□□□ 0.62
HMGN4-201ENST00000377575 IL27Q8NEV9 243 aa18.93■□□□□ 0.62
HMGN4-201ENST00000377575 MAP7D2Q96T17 732 aa18.93■□□□□ 0.62
HMGN4-201ENST00000377575 LINC01553A4QN01 128 aa18.92■□□□□ 0.62
HMGN4-201ENST00000377575 BTBD18B2RXH4 712 aa18.92■□□□□ 0.62
HMGN4-201ENST00000377575 RBAK-RBAKDNI3L0D1 243 aa18.92■□□□□ 0.62
HMGN4-201ENST00000377575 GTPBP6O43824 516 aaPredicted RBP18.92■□□□□ 0.62
HMGN4-201ENST00000377575 ST18O60284 1047 aa18.92■□□□□ 0.62
HMGN4-201ENST00000377575 UPP2O95045 317 aa18.92■□□□□ 0.62
HMGN4-201ENST00000377575 BAG4O95429 457 aaKnown RBP18.92■□□□□ 0.62
HMGN4-201ENST00000377575 ODR4Q5SWX8 454 aa18.92■□□□□ 0.62
HMGN4-201ENST00000377575 FAM43BQ6ZT52 329 aaPredicted RBP18.92■□□□□ 0.62
HMGN4-201ENST00000377575 SLFN12Q8IYM2 578 aa18.92■□□□□ 0.62
HMGN4-201ENST00000377575 ZNF710Q8N1W2 664 aa18.92■□□□□ 0.62
HMGN4-201ENST00000377575 C8orf76Q96K31 380 aa18.92■□□□□ 0.62
HMGN4-201ENST00000377575 TGS1Q96RS0 853 aaKnown RBP18.92■□□□□ 0.62
HMGN4-201ENST00000377575 AGO3Q9H9G7 860 aaKnown RBP18.92■□□□□ 0.62
HMGN4-201ENST00000377575 SEPT9Q9UHD8 586 aaPredicted RBP18.92■□□□□ 0.62
HMGN4-201ENST00000377575 VAV3Q9UKW4 847 aa18.92■□□□□ 0.62
HMGN4-201ENST00000377575 GINS2Q9Y248 185 aa18.92■□□□□ 0.62
HMGN4-201ENST00000377575 ARID2Q68CP9 1835 aa18.92■□□□□ 0.62
HMGN4-201ENST00000377575 FAM205CA6NFA0 338 aa18.91■□□□□ 0.62
HMGN4-201ENST00000377575 DKC1O60832 514 aaKnown RBP eCLIP18.91■□□□□ 0.62
HMGN4-201ENST00000377575 PSMC5P62195 406 aa18.91■□□□□ 0.62
HMGN4-201ENST00000377575 TBC1D8BQ0IIM8 1120 aa18.91■□□□□ 0.62
HMGN4-201ENST00000377575 XKR3Q5GH77 459 aa18.91■□□□□ 0.62
HMGN4-201ENST00000377575 SP7Q8TDD2 431 aaPredicted RBP18.91■□□□□ 0.62
HMGN4-201ENST00000377575 PADI3Q9ULW8 664 aa18.91■□□□□ 0.62
HMGN4-201ENST00000377575 AKT3Q9Y243 479 aa18.91■□□□□ 0.62
HMGN4-201ENST00000377575 EPOPA6NHQ4 379 aa18.9■□□□□ 0.62
HMGN4-201ENST00000377575 RPS6KA5O75582 802 aa18.9■□□□□ 0.62
HMGN4-201ENST00000377575 CLCN3P51790 818 aa18.9■□□□□ 0.62
HMGN4-201ENST00000377575 ERVK-21P61565 698 aa18.9■□□□□ 0.62
HMGN4-201ENST00000377575 CACNB1Q02641 598 aaPredicted RBP18.9■□□□□ 0.62
HMGN4-201ENST00000377575 EFCAB12Q6NXP0 572 aa18.9■□□□□ 0.62
HMGN4-201ENST00000377575 FAM184AQ8NB25 1140 aa18.9■□□□□ 0.62
HMGN4-201ENST00000377575 BANK1Q8NDB2 785 aa18.9■□□□□ 0.62
HMGN4-201ENST00000377575 HAS1Q92839 578 aa18.9■□□□□ 0.62
HMGN4-201ENST00000377575 ENPP3O14638 875 aa18.89■□□□□ 0.61
HMGN4-201ENST00000377575 VTNP04004 478 aa18.89■□□□□ 0.61
HMGN4-201ENST00000377575 POU3F3P20264 500 aaPredicted RBP18.89■□□□□ 0.61
HMGN4-201ENST00000377575 CRYBB1P53674 252 aaPredicted RBP18.89■□□□□ 0.61
HMGN4-201ENST00000377575 KIZQ2M2Z5 673 aa18.89■□□□□ 0.61
HMGN4-201ENST00000377575 MTERF2Q49AM1 385 aa18.89■□□□□ 0.61
HMGN4-201ENST00000377575 MICALL1Q8N3F8 863 aa18.89■□□□□ 0.61
HMGN4-201ENST00000377575 LRRC71Q8N4P6 559 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms