RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 AP3B2Q13367 1082 aa21.8■■□□□ 1.08
CBWD3-204ENST00000377349 MAPK8IP2Q13387 824 aaPredicted RBP21.8■■□□□ 1.08
CBWD3-204ENST00000377349 SMAD2Q15796 467 aaKnown RBP21.8■■□□□ 1.08
CBWD3-204ENST00000377349 TMEM266Q2M3C6 531 aa21.8■■□□□ 1.08
CBWD3-204ENST00000377349 NIPA1Q7RTP0 329 aa21.8■■□□□ 1.08
CBWD3-204ENST00000377349 SPPL3Q8TCT6 385 aa21.8■■□□□ 1.08
CBWD3-204ENST00000377349 CCDC196A0A1B0GTZ2 297 aa21.79■■□□□ 1.08
CBWD3-204ENST00000377349 M0QZ92 97 aa21.79■■□□□ 1.08
CBWD3-204ENST00000377349 MBTPS2O43462 519 aa21.79■■□□□ 1.08
CBWD3-204ENST00000377349 MGEA5O60502 916 aa21.79■■□□□ 1.08
CBWD3-204ENST00000377349 CSPG5O95196 566 aa21.79■■□□□ 1.08
CBWD3-204ENST00000377349 SCG2P13521 617 aa21.79■■□□□ 1.08
CBWD3-204ENST00000377349 ALADP13716 330 aa21.79■■□□□ 1.08
CBWD3-204ENST00000377349 ATP4AP20648 1035 aa21.79■■□□□ 1.08
CBWD3-204ENST00000377349 KLRC1P26715 233 aa21.79■■□□□ 1.08
CBWD3-204ENST00000377349 SLC26A2P50443 739 aa21.79■■□□□ 1.08
CBWD3-204ENST00000377349 KRT76Q01546 638 aa21.79■■□□□ 1.08
CBWD3-204ENST00000377349 CLUL1Q15846 466 aa21.79■■□□□ 1.08
CBWD3-204ENST00000377349 KIAA0319LQ8IZA0 1049 aa21.79■■□□□ 1.08
CBWD3-204ENST00000377349 NME8Q8N427 588 aa21.79■■□□□ 1.08
CBWD3-204ENST00000377349 ATP8B4Q8TF62 1192 aa21.79■■□□□ 1.08
CBWD3-204ENST00000377349 TMEM40Q8WWA1 233 aa21.79■■□□□ 1.08
CBWD3-204ENST00000377349 TNPO1Q92973 898 aaKnown RBP21.79■■□□□ 1.08
CBWD3-204ENST00000377349 CDHR5Q9HBB8 845 aa21.79■■□□□ 1.08
CBWD3-204ENST00000377349 ERVK-5Q9HDB9 667 aa21.79■■□□□ 1.08
CBWD3-204ENST00000377349 ZDBF2Q9HCK1 2354 aa21.78■■□□□ 1.08
CBWD3-204ENST00000377349 DDX39AO00148 427 aaKnown RBP21.78■■□□□ 1.08
CBWD3-204ENST00000377349 DCXO43602 365 aa21.78■■□□□ 1.08
CBWD3-204ENST00000377349 IRS1P35568 1242 aa21.78■■□□□ 1.08
CBWD3-204ENST00000377349 ZNF76P36508 570 aa21.78■■□□□ 1.08
CBWD3-204ENST00000377349 AKAP17AQ02040 695 aaKnown RBP21.78■■□□□ 1.08
CBWD3-204ENST00000377349 ADAM15Q13444 863 aa21.78■■□□□ 1.08
CBWD3-204ENST00000377349 PAN2Q504Q3 1202 aaKnown RBP21.78■■□□□ 1.08
CBWD3-204ENST00000377349 JAKMIP3Q5VZ66 844 aa21.78■■□□□ 1.08
CBWD3-204ENST00000377349 ADGRD2Q7Z7M1 963 aa21.78■■□□□ 1.08
CBWD3-204ENST00000377349 POTEDQ86YR6 584 aa21.78■■□□□ 1.08
CBWD3-204ENST00000377349 KLHL23Q8NBE8 558 aa21.78■■□□□ 1.08
CBWD3-204ENST00000377349 PHKBQ93100 1093 aa21.78■■□□□ 1.08
CBWD3-204ENST00000377349 FAM50BQ9Y247 325 aa21.78■■□□□ 1.08
CBWD3-204ENST00000377349 HBP1O60381 514 aa21.77■■□□□ 1.08
CBWD3-204ENST00000377349 NAALADL2Q58DX5 795 aa21.77■■□□□ 1.08
CBWD3-204ENST00000377349 KCNB2Q92953 911 aa21.77■■□□□ 1.08
CBWD3-204ENST00000377349 MSLNLQ96KJ4 702 aa21.77■■□□□ 1.08
CBWD3-204ENST00000377349 NOC2LQ9Y3T9 749 aaKnown RBP21.77■■□□□ 1.08
CBWD3-204ENST00000377349 COL1A2P08123 1366 aa21.76■■□□□ 1.07
CBWD3-204ENST00000377349 CYP3A4P08684 503 aa21.76■■□□□ 1.07
CBWD3-204ENST00000377349 STAG3L1P0CL83 205 aa21.76■■□□□ 1.07
CBWD3-204ENST00000377349 RCAN1P53805 252 aa21.76■■□□□ 1.07
CBWD3-204ENST00000377349 CCT2P78371 535 aaKnown RBP21.76■■□□□ 1.07
CBWD3-204ENST00000377349 SMAD4Q13485 552 aaKnown RBP21.76■■□□□ 1.07
CBWD3-204ENST00000377349 PFKFB3Q16875 520 aaPredicted RBP21.76■■□□□ 1.07
CBWD3-204ENST00000377349 PLA2G4DQ86XP0 818 aa21.76■■□□□ 1.07
CBWD3-204ENST00000377349 UIMC1Q96RL1 719 aa21.76■■□□□ 1.07
CBWD3-204ENST00000377349 GLT8D2Q9H1C3 349 aa21.76■■□□□ 1.07
CBWD3-204ENST00000377349 IGFLR1Q9H665 355 aa21.76■■□□□ 1.07
CBWD3-204ENST00000377349 SARSP49591 514 aaKnown RBP21.75■■□□□ 1.07
CBWD3-204ENST00000377349 POF1BQ8WVV4 589 aa21.75■■□□□ 1.07
CBWD3-204ENST00000377349 LARP6Q9BRS8 491 aaKnown RBP21.75■■□□□ 1.07
CBWD3-204ENST00000377349 SLC26A6Q9BXS9 759 aa21.75■■□□□ 1.07
CBWD3-204ENST00000377349 NCOA5Q9HCD5 579 aaKnown RBP21.75■■□□□ 1.07
CBWD3-204ENST00000377349 CLEC1BQ9P126 229 aa21.75■■□□□ 1.07
CBWD3-204ENST00000377349 PCDHGC5Q9Y5F6 944 aa21.75■■□□□ 1.07
CBWD3-204ENST00000377349 NID2Q14112 1375 aa21.75■■□□□ 1.07
CBWD3-204ENST00000377349 IPO5O00410 1097 aaKnown RBP21.74■■□□□ 1.07
CBWD3-204ENST00000377349 BACH1O14867 736 aa21.74■■□□□ 1.07
CBWD3-204ENST00000377349 NFX1Q12986 1120 aaKnown RBP21.74■■□□□ 1.07
CBWD3-204ENST00000377349 PKN1Q16512 942 aa21.74■■□□□ 1.07
CBWD3-204ENST00000377349 FAM160B1Q5W0V3 765 aa21.74■■□□□ 1.07
CBWD3-204ENST00000377349 ZMYND12Q9H0C1 365 aa21.74■■□□□ 1.07
CBWD3-204ENST00000377349 ZNF302Q9NR11 478 aa21.74■■□□□ 1.07
CBWD3-204ENST00000377349 CD207Q9UJ71 328 aa21.74■■□□□ 1.07
CBWD3-204ENST00000377349 ESYT2A0FGR8 921 aa21.73■■□□□ 1.07
CBWD3-204ENST00000377349 C9IYK1 514 aa21.73■■□□□ 1.07
CBWD3-204ENST00000377349 C22orf31O95567 290 aa21.73■■□□□ 1.07
CBWD3-204ENST00000377349 EYA4O95677 639 aa21.73■■□□□ 1.07
CBWD3-204ENST00000377349 GLP2RO95838 553 aa21.73■■□□□ 1.07
CBWD3-204ENST00000377349 ZNF484Q5JVG2 852 aa21.73■■□□□ 1.07
CBWD3-204ENST00000377349 SWSAP1Q6NVH7 229 aa21.73■■□□□ 1.07
CBWD3-204ENST00000377349 PDXDC2PQ6P474 469 aa21.73■■□□□ 1.07
CBWD3-204ENST00000377349 CCDC12Q8WUD4 166 aaPredicted RBP21.73■■□□□ 1.07
CBWD3-204ENST00000377349 UPF3BQ9BZI7 483 aaKnown RBP21.73■■□□□ 1.07
CBWD3-204ENST00000377349 C6orf50Q9HD87 102 aa21.73■■□□□ 1.07
CBWD3-204ENST00000377349 RGS18Q9NS28 235 aa21.73■■□□□ 1.07
CBWD3-204ENST00000377349 PPP4R2Q9NY27 417 aa21.73■■□□□ 1.07
CBWD3-204ENST00000377349 HCSTQ9UBK5 93 aa21.73■■□□□ 1.07
CBWD3-204ENST00000377349 ST3GAL5Q9UNP4 418 aa21.73■■□□□ 1.07
CBWD3-204ENST00000377349 GINS2Q9Y248 185 aa21.73■■□□□ 1.07
CBWD3-204ENST00000377349 MAFBQ9Y5Q3 323 aaPredicted RBP21.73■■□□□ 1.07
CBWD3-204ENST00000377349 CYP46A1Q9Y6A2 500 aa21.73■■□□□ 1.07
CBWD3-204ENST00000377349 RPS6KA5O75582 802 aa21.72■■□□□ 1.07
CBWD3-204ENST00000377349 MIS18BP1Q6P0N0 1132 aa21.72■■□□□ 1.07
CBWD3-204ENST00000377349 RUFY3Q7L099 469 aa21.72■■□□□ 1.07
CBWD3-204ENST00000377349 EFHBQ8N7U6 833 aa21.72■■□□□ 1.07
CBWD3-204ENST00000377349 ADAM2Q99965 735 aa21.72■■□□□ 1.07
CBWD3-204ENST00000377349 MYO10Q9HD67 2058 aa21.72■■□□□ 1.07
CBWD3-204ENST00000377349 EDIL3O43854 480 aa21.72■■□□□ 1.07
CBWD3-204ENST00000377349 STK3Q13188 491 aa21.72■■□□□ 1.07
CBWD3-204ENST00000377349 FAM102BQ5T8I3 360 aa21.72■■□□□ 1.07
CBWD3-204ENST00000377349 FAM43BQ6ZT52 329 aaPredicted RBP21.72■■□□□ 1.07
CBWD3-204ENST00000377349 FAM228AQ86W67 206 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms