RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 H3BRB1 525 aa14.41□□□□□ -0.1
CBWD3-203ENST00000377344 CYP11B2P19099 503 aa14.41□□□□□ -0.1
CBWD3-203ENST00000377344 RARRES1P49788 294 aa14.41□□□□□ -0.1
CBWD3-203ENST00000377344 SLC26A2P50443 739 aa14.41□□□□□ -0.1
CBWD3-203ENST00000377344 DPYDQ12882 1025 aa14.41□□□□□ -0.1
CBWD3-203ENST00000377344 PLCB4Q15147 1175 aa14.41□□□□□ -0.1
CBWD3-203ENST00000377344 PADI6Q6TGC4 694 aa14.41□□□□□ -0.1
CBWD3-203ENST00000377344 C16orf70Q9BSU1 422 aa14.41□□□□□ -0.1
CBWD3-203ENST00000377344 RUSC1Q9BVN2 902 aa14.41□□□□□ -0.1
CBWD3-203ENST00000377344 TRIM9Q9C026 710 aa14.41□□□□□ -0.1
CBWD3-203ENST00000377344 TUT1Q9H6E5 874 aaKnown RBP14.41□□□□□ -0.1
CBWD3-203ENST00000377344 BIN1O00499 593 aa14.41□□□□□ -0.1
CBWD3-203ENST00000377344 ZEB2O60315 1214 aa14.41□□□□□ -0.1
CBWD3-203ENST00000377344 MSCO60682 206 aa14.41□□□□□ -0.1
CBWD3-203ENST00000377344 USO1O60763 962 aaKnown RBP14.41□□□□□ -0.1
CBWD3-203ENST00000377344 STBD1O95210 358 aa14.41□□□□□ -0.1
CBWD3-203ENST00000377344 MYL1P05976 194 aa14.41□□□□□ -0.1
CBWD3-203ENST00000377344 HOXD8P13378 290 aaPredicted RBP14.41□□□□□ -0.1
CBWD3-203ENST00000377344 IDEP14735 1019 aa14.41□□□□□ -0.1
CBWD3-203ENST00000377344 CACNB1Q02641 598 aaPredicted RBP14.41□□□□□ -0.1
CBWD3-203ENST00000377344 ISM2Q6H9L7 571 aa14.41□□□□□ -0.1
CBWD3-203ENST00000377344 RINT1Q6NUQ1 792 aa14.41□□□□□ -0.1
CBWD3-203ENST00000377344 ATP8B4Q8TF62 1192 aa14.41□□□□□ -0.1
CBWD3-203ENST00000377344 BBXQ8WY36 941 aaPredicted RBP14.41□□□□□ -0.1
CBWD3-203ENST00000377344 C7orf25Q9BPX7 421 aa14.41□□□□□ -0.1
CBWD3-203ENST00000377344 ANP32EQ9BTT0 268 aa14.41□□□□□ -0.1
CBWD3-203ENST00000377344 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.41□□□□□ -0.1
CBWD3-203ENST00000377344 UNC93B1Q9H1C4 597 aa14.41□□□□□ -0.1
CBWD3-203ENST00000377344 UPF3AQ9H1J1 476 aaKnown RBP14.41□□□□□ -0.1
CBWD3-203ENST00000377344 RNPEPQ9H4A4 650 aa14.41□□□□□ -0.1
CBWD3-203ENST00000377344 CYP26B1Q9NR63 512 aa14.41□□□□□ -0.1
CBWD3-203ENST00000377344 ARSHQ5FYA8 562 aa14.4□□□□□ -0.1
CBWD3-203ENST00000377344 FBXO46Q6PJ61 603 aaPredicted RBP14.4□□□□□ -0.1
CBWD3-203ENST00000377344 SASS6Q6UVJ0 657 aa14.4□□□□□ -0.1
CBWD3-203ENST00000377344 RBM43Q6ZSC3 357 aaKnown RBP14.4□□□□□ -0.1
CBWD3-203ENST00000377344 MAEAQ7L5Y9 396 aa14.4□□□□□ -0.1
CBWD3-203ENST00000377344 ZHX3Q9H4I2 956 aa14.4□□□□□ -0.1
CBWD3-203ENST00000377344 LOXHD1Q8IVV2 1947 aa14.4□□□□□ -0.1
CBWD3-203ENST00000377344 ADAMTS4O75173 837 aa14.39□□□□□ -0.11
CBWD3-203ENST00000377344 RPN1P04843 607 aaKnown RBP14.39□□□□□ -0.11
CBWD3-203ENST00000377344 MTFR1Q15390 333 aa14.39□□□□□ -0.11
CBWD3-203ENST00000377344 KIAA0753Q2KHM9 967 aa14.39□□□□□ -0.11
CBWD3-203ENST00000377344 C1orf186Q6ZWK4 172 aa14.39□□□□□ -0.11
CBWD3-203ENST00000377344 RNF180Q86T96 592 aa14.39□□□□□ -0.11
CBWD3-203ENST00000377344 NIFKQ9BYG3 293 aaKnown RBP14.39□□□□□ -0.11
CBWD3-203ENST00000377344 RNF208Q9H0X6 261 aa14.39□□□□□ -0.11
CBWD3-203ENST00000377344 POLD4Q9HCU8 107 aa14.39□□□□□ -0.11
CBWD3-203ENST00000377344 HBP1O60381 514 aa14.38□□□□□ -0.11
CBWD3-203ENST00000377344 KPNA6O60684 536 aa14.38□□□□□ -0.11
CBWD3-203ENST00000377344 CCL5P13501 91 aa14.38□□□□□ -0.11
CBWD3-203ENST00000377344 POLGP54098 1239 aaPredicted RBP14.38□□□□□ -0.11
CBWD3-203ENST00000377344 IGBP1P78318 339 aa14.38□□□□□ -0.11
CBWD3-203ENST00000377344 PURAQ00577 322 aaKnown RBP14.38□□□□□ -0.11
CBWD3-203ENST00000377344 PKN2Q16513 984 aaKnown RBP14.38□□□□□ -0.11
CBWD3-203ENST00000377344 CCDC47Q96A33 483 aaKnown RBP14.38□□□□□ -0.11
CBWD3-203ENST00000377344 GSDMAQ96QA5 445 aa14.38□□□□□ -0.11
CBWD3-203ENST00000377344 REEP2Q9BRK0 252 aa14.38□□□□□ -0.11
CBWD3-203ENST00000377344 KCND2Q9NZV8 630 aa14.38□□□□□ -0.11
CBWD3-203ENST00000377344 TBCAO75347 108 aaKnown RBP14.38□□□□□ -0.11
CBWD3-203ENST00000377344 F2P00734 622 aa14.38□□□□□ -0.11
CBWD3-203ENST00000377344 ASGR1P07306 291 aa14.38□□□□□ -0.11
CBWD3-203ENST00000377344 GIT2Q14161 759 aa14.38□□□□□ -0.11
CBWD3-203ENST00000377344 MFSD10Q14728 455 aa14.38□□□□□ -0.11
CBWD3-203ENST00000377344 KCNA10Q16322 511 aa14.38□□□□□ -0.11
CBWD3-203ENST00000377344 LHX8Q68G74 356 aa14.38□□□□□ -0.11
CBWD3-203ENST00000377344 CXCL17Q6UXB2 119 aa14.38□□□□□ -0.11
CBWD3-203ENST00000377344 PPP1R13LQ8WUF5 828 aa14.38□□□□□ -0.11
CBWD3-203ENST00000377344 TRAPPC12Q8WVT3 735 aa14.38□□□□□ -0.11
CBWD3-203ENST00000377344 SLC7A3Q8WY07 619 aa14.38□□□□□ -0.11
CBWD3-203ENST00000377344 KAT2BQ92831 832 aa14.38□□□□□ -0.11
CBWD3-203ENST00000377344 DNAJC19Q96DA6 116 aa14.38□□□□□ -0.11
CBWD3-203ENST00000377344 KATNAL1Q9BW62 490 aa14.38□□□□□ -0.11
CBWD3-203ENST00000377344 EXOC1Q9NV70 894 aa14.38□□□□□ -0.11
CBWD3-203ENST00000377344 PANK4Q9NVE7 773 aa14.38□□□□□ -0.11
CBWD3-203ENST00000377344 TUBE1Q9UJT0 475 aa14.38□□□□□ -0.11
CBWD3-203ENST00000377344 DGAT1O75907 488 aa14.37□□□□□ -0.11
CBWD3-203ENST00000377344 INSRRP14616 1297 aa14.37□□□□□ -0.11
CBWD3-203ENST00000377344 PSEN2P49810 448 aa14.37□□□□□ -0.11
CBWD3-203ENST00000377344 TBC1D8BQ0IIM8 1120 aa14.37□□□□□ -0.11
CBWD3-203ENST00000377344 LRRC41Q15345 812 aa14.37□□□□□ -0.11
CBWD3-203ENST00000377344 KMT5BQ4FZB7 885 aa14.37□□□□□ -0.11
CBWD3-203ENST00000377344 FAM102BQ5T8I3 360 aa14.37□□□□□ -0.11
CBWD3-203ENST00000377344 UNC13DQ70J99 1090 aa14.37□□□□□ -0.11
CBWD3-203ENST00000377344 CCDC65Q8IXS2 484 aa14.37□□□□□ -0.11
CBWD3-203ENST00000377344 PCSK9Q8NBP7 692 aaKnown RBP14.37□□□□□ -0.11
CBWD3-203ENST00000377344 SPATA20Q8TB22 786 aa14.37□□□□□ -0.11
CBWD3-203ENST00000377344 DEFB118Q96PH6 123 aa14.37□□□□□ -0.11
CBWD3-203ENST00000377344 MTG1Q9BT17 334 aaPredicted RBP14.37□□□□□ -0.11
CBWD3-203ENST00000377344 ATP6V0A4Q9HBG4 840 aa14.37□□□□□ -0.11
CBWD3-203ENST00000377344 RMND1Q9NWS8 449 aa14.37□□□□□ -0.11
CBWD3-203ENST00000377344 MAN1B1Q9UKM7 699 aa14.37□□□□□ -0.11
CBWD3-203ENST00000377344 ARID2Q68CP9 1835 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 PVALEFA0A1B0GWK0 134 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 SFI1A8K8P3 1242 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 RSPH10B2B2RC85 870 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 KLRC4O43908 158 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 HIP1RO75146 1068 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 FAM13AO94988 1023 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 RSPH10BP0C881 870 aa14.36□□□□□ -0.11
CBWD3-203ENST00000377344 CCDC192P0DO97 292 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms