RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 HAUS1Q96CS2 278 aa12.72□□□□□ -0.37
DDR1-227ENST00000376570 PDE2AO00408 941 aaPredicted RBP12.72□□□□□ -0.37
DDR1-227ENST00000376570 PIK3R2O00459 728 aa12.72□□□□□ -0.37
DDR1-227ENST00000376570 AKAP3O75969 853 aa12.72□□□□□ -0.37
DDR1-227ENST00000376570 CCT5P48643 541 aa12.72□□□□□ -0.37
DDR1-227ENST00000376570 PTK2Q05397 1052 aa12.72□□□□□ -0.37
DDR1-227ENST00000376570 SYCP2LQ5T4T6 812 aa12.72□□□□□ -0.37
DDR1-227ENST00000376570 FOXR1Q6PIV2 292 aa12.72□□□□□ -0.37
DDR1-227ENST00000376570 WDR59Q6PJI9 974 aa12.72□□□□□ -0.37
DDR1-227ENST00000376570 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.72□□□□□ -0.37
DDR1-227ENST00000376570 AFAP1L1Q8TED9 768 aa12.72□□□□□ -0.37
DDR1-227ENST00000376570 KLHL11Q9NVR0 708 aa12.72□□□□□ -0.37
DDR1-227ENST00000376570 LARSQ9P2J5 1176 aaKnown RBP12.72□□□□□ -0.37
DDR1-227ENST00000376570 H3BQF6 201 aa12.71□□□□□ -0.37
DDR1-227ENST00000376570 GGCXP38435 758 aa12.71□□□□□ -0.37
DDR1-227ENST00000376570 CXCL9Q07325 125 aa12.71□□□□□ -0.37
DDR1-227ENST00000376570 DRAP1Q14919 205 aaPredicted RBP12.71□□□□□ -0.37
DDR1-227ENST00000376570 MTMR8Q96EF0 704 aa12.71□□□□□ -0.37
DDR1-227ENST00000376570 HEMGNQ9BXL5 484 aa12.71□□□□□ -0.37
DDR1-227ENST00000376570 MLXIPLQ9NP71 852 aa12.71□□□□□ -0.37
DDR1-227ENST00000376570 RBM12Q9NTZ6 932 aaKnown RBP12.71□□□□□ -0.37
DDR1-227ENST00000376570 MYH13Q9UKX3 1938 aa12.71□□□□□ -0.37
DDR1-227ENST00000376570 POTEB2H3BUK9 544 aa12.71□□□□□ -0.37
DDR1-227ENST00000376570 CTNNA2P26232 953 aa12.71□□□□□ -0.37
DDR1-227ENST00000376570 CEP55Q53EZ4 464 aa12.71□□□□□ -0.37
DDR1-227ENST00000376570 GSTA5Q7RTV2 222 aa12.71□□□□□ -0.37
DDR1-227ENST00000376570 IL31RAQ8NI17 732 aa12.71□□□□□ -0.37
DDR1-227ENST00000376570 TMEM143Q96AN5 459 aa12.71□□□□□ -0.37
DDR1-227ENST00000376570 OSBPL9Q96SU4 736 aa12.71□□□□□ -0.37
DDR1-227ENST00000376570 SELENOOQ9BVL4 669 aa12.71□□□□□ -0.37
DDR1-227ENST00000376570 CELF4Q9BZC1 486 aaKnown RBP12.71□□□□□ -0.37
DDR1-227ENST00000376570 CUEDC2Q9H467 287 aa12.71□□□□□ -0.37
DDR1-227ENST00000376570 RPAP3Q9H6T3 665 aaPredicted RBP12.71□□□□□ -0.37
DDR1-227ENST00000376570 SYNCQ9H7C4 482 aa12.71□□□□□ -0.37
DDR1-227ENST00000376570 TOPORSQ9NS56 1045 aaPredicted RBP12.71□□□□□ -0.37
DDR1-227ENST00000376570 REXO2Q9Y3B8 237 aaKnown RBP12.71□□□□□ -0.37
DDR1-227ENST00000376570 ACTN2P35609 894 aa12.71□□□□□ -0.38
DDR1-227ENST00000376570 SLC15A2Q16348 729 aa12.71□□□□□ -0.38
DDR1-227ENST00000376570 NT5DC1Q5TFE4 455 aa12.71□□□□□ -0.38
DDR1-227ENST00000376570 TAOK3Q9H2K8 898 aa12.71□□□□□ -0.38
DDR1-227ENST00000376570 GABBR1Q9UBS5 961 aa12.71□□□□□ -0.38
DDR1-227ENST00000376570 MKRN1Q9UHC7 482 aaKnown RBP12.71□□□□□ -0.38
DDR1-227ENST00000376570 IFNB1P01574 187 aa12.7□□□□□ -0.38
DDR1-227ENST00000376570 ACOT2P49753 483 aa12.7□□□□□ -0.38
DDR1-227ENST00000376570 KCNB1Q14721 858 aa12.7□□□□□ -0.38
DDR1-227ENST00000376570 PPP1R7Q15435 360 aa12.7□□□□□ -0.38
DDR1-227ENST00000376570 TRADDQ15628 312 aa12.7□□□□□ -0.38
DDR1-227ENST00000376570 ANGEL2Q5VTE6 544 aaKnown RBP12.7□□□□□ -0.38
DDR1-227ENST00000376570 RNF207Q6ZRF8 634 aa12.7□□□□□ -0.38
DDR1-227ENST00000376570 FAM76AQ8TAV0 307 aa12.7□□□□□ -0.38
DDR1-227ENST00000376570 FAM213AQ9BRX8 229 aa12.7□□□□□ -0.38
DDR1-227ENST00000376570 L2HGDHQ9H9P8 463 aa12.7□□□□□ -0.38
DDR1-227ENST00000376570 RNF146Q9NTX7 359 aa12.7□□□□□ -0.38
DDR1-227ENST00000376570 YDJCA8MPS7 323 aa12.7□□□□□ -0.38
DDR1-227ENST00000376570 IVLP07476 585 aa12.7□□□□□ -0.38
DDR1-227ENST00000376570 GCFC2P16383 781 aaKnown RBP12.7□□□□□ -0.38
DDR1-227ENST00000376570 CBWD1Q9BRT8 395 aa12.7□□□□□ -0.38
DDR1-227ENST00000376570 ATP8A1Q9Y2Q0 1164 aa12.7□□□□□ -0.38
DDR1-227ENST00000376570 EMSYQ7Z589 1322 aa12.7□□□□□ -0.38
DDR1-227ENST00000376570 ANKRD62A6NC57 917 aa12.7□□□□□ -0.38
DDR1-227ENST00000376570 TUBB4AP04350 444 aa12.7□□□□□ -0.38
DDR1-227ENST00000376570 IFNAR2P48551 515 aa12.7□□□□□ -0.38
DDR1-227ENST00000376570 LRRC63Q05C16 580 aa12.7□□□□□ -0.38
DDR1-227ENST00000376570 KIAA1755Q5JYT7 1200 aa12.7□□□□□ -0.38
DDR1-227ENST00000376570 HHIPL2Q6UWX4 724 aa12.7□□□□□ -0.38
DDR1-227ENST00000376570 CCDC105Q8IYK2 499 aa12.7□□□□□ -0.38
DDR1-227ENST00000376570 TSGA10Q9BZW7 698 aa12.7□□□□□ -0.38
DDR1-227ENST00000376570 EHD4Q9H223 541 aa12.7□□□□□ -0.38
DDR1-227ENST00000376570 AMACRQ9UHK6 382 aa12.7□□□□□ -0.38
DDR1-227ENST00000376570 NOP56O00567 594 aaKnown RBP12.69□□□□□ -0.38
DDR1-227ENST00000376570 ATRNO75882 1429 aa12.69□□□□□ -0.38
DDR1-227ENST00000376570 KRT14P02533 472 aa12.69□□□□□ -0.38
DDR1-227ENST00000376570 ARHGAP25P42331 645 aa12.69□□□□□ -0.38
DDR1-227ENST00000376570 SMTNP53814 917 aa12.69□□□□□ -0.38
DDR1-227ENST00000376570 PLTPP55058 493 aa12.69□□□□□ -0.38
DDR1-227ENST00000376570 RPS6P62753 249 aaKnown RBP12.69□□□□□ -0.38
DDR1-227ENST00000376570 IRX3P78415 501 aaPredicted RBP12.69□□□□□ -0.38
DDR1-227ENST00000376570 DALRD3Q5D0E6 543 aaKnown RBP12.69□□□□□ -0.38
DDR1-227ENST00000376570 PDXDC1Q6P996 788 aa12.69□□□□□ -0.38
DDR1-227ENST00000376570 KAT5Q92993 513 aa12.69□□□□□ -0.38
DDR1-227ENST00000376570 THOC1Q96FV9 657 aaKnown RBP12.69□□□□□ -0.38
DDR1-227ENST00000376570 APOL6Q9BWW8 343 aa12.69□□□□□ -0.38
DDR1-227ENST00000376570 SH2D4AQ9H788 454 aa12.69□□□□□ -0.38
DDR1-227ENST00000376570 OSGEPQ9NPF4 335 aa12.69□□□□□ -0.38
DDR1-227ENST00000376570 NXF1Q9UBU9 619 aaKnown RBP12.69□□□□□ -0.38
DDR1-227ENST00000376570 FEZ2Q9UHY8 353 aaPredicted RBP12.69□□□□□ -0.38
DDR1-227ENST00000376570 CNOT7Q9UIV1 285 aaKnown RBP12.69□□□□□ -0.38
DDR1-227ENST00000376570 PDS5AQ29RF7 1337 aaKnown RBP12.69□□□□□ -0.38
DDR1-227ENST00000376570 EBAG9O00559 213 aa12.69□□□□□ -0.38
DDR1-227ENST00000376570 MEIS2O14770 477 aa12.69□□□□□ -0.38
DDR1-227ENST00000376570 ERLIN2O94905 339 aa12.69□□□□□ -0.38
DDR1-227ENST00000376570 FOSP01100 380 aaPredicted RBP12.69□□□□□ -0.38
DDR1-227ENST00000376570 RDXP35241 583 aaKnown RBP12.69□□□□□ -0.38
DDR1-227ENST00000376570 PSMC2P35998 433 aaKnown RBP12.69□□□□□ -0.38
DDR1-227ENST00000376570 PRPHP41219 470 aa12.69□□□□□ -0.38
DDR1-227ENST00000376570 GNGT1P63211 74 aa12.69□□□□□ -0.38
DDR1-227ENST00000376570 PDCLQ13371 301 aa12.69□□□□□ -0.38
DDR1-227ENST00000376570 DCAF4Q8WV16 495 aa12.69□□□□□ -0.38
DDR1-227ENST00000376570 UNC45AQ9H3U1 944 aa12.69□□□□□ -0.38
DDR1-227ENST00000376570 MYH14Q7Z406 1995 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms