RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 RAD9BQ6WBX8 426 aa13.9□□□□□ -0.18
CLCN6-206ENST00000376496 PPP1R13BQ96KQ4 1090 aa13.9□□□□□ -0.18
CLCN6-206ENST00000376496 CRACR2AQ9BSW2 395 aa13.9□□□□□ -0.18
CLCN6-206ENST00000376496 KIFC3Q9BVG8 833 aa13.9□□□□□ -0.18
CLCN6-206ENST00000376496 FAM207AQ9NSI2 230 aaPredicted RBP13.9□□□□□ -0.18
CLCN6-206ENST00000376496 ZMYM2Q9UBW7 1377 aa13.9□□□□□ -0.18
CLCN6-206ENST00000376496 ITIH6Q6UXX5 1313 aa13.89□□□□□ -0.19
CLCN6-206ENST00000376496 TULP1O00294 542 aaPredicted RBP13.89□□□□□ -0.19
CLCN6-206ENST00000376496 TGFB1I1O43294 461 aa13.89□□□□□ -0.19
CLCN6-206ENST00000376496 EIF3JO75822 258 aaKnown RBP13.89□□□□□ -0.19
CLCN6-206ENST00000376496 ERVK-9P63128 1117 aa13.89□□□□□ -0.19
CLCN6-206ENST00000376496 ERVK-24P63145 666 aa13.89□□□□□ -0.19
CLCN6-206ENST00000376496 ZNF746Q6NUN9 644 aaPredicted RBP13.89□□□□□ -0.19
CLCN6-206ENST00000376496 DNERQ8NFT8 737 aa13.89□□□□□ -0.19
CLCN6-206ENST00000376496 MMP19Q99542 508 aa13.89□□□□□ -0.19
CLCN6-206ENST00000376496 ARIH2O95376 493 aa13.89□□□□□ -0.19
CLCN6-206ENST00000376496 TNNT1P13805 278 aa13.89□□□□□ -0.19
CLCN6-206ENST00000376496 GAP43P17677 238 aa13.89□□□□□ -0.19
CLCN6-206ENST00000376496 UBA1P22314 1058 aaKnown RBP13.89□□□□□ -0.19
CLCN6-206ENST00000376496 SFNP31947 248 aa13.89□□□□□ -0.19
CLCN6-206ENST00000376496 FAM102BQ5T8I3 360 aa13.89□□□□□ -0.19
CLCN6-206ENST00000376496 CST9Q5W186 159 aa13.89□□□□□ -0.19
CLCN6-206ENST00000376496 ZNF720Q7Z2F6 126 aa13.89□□□□□ -0.19
CLCN6-206ENST00000376496 C4orf19Q8IY42 314 aa13.89□□□□□ -0.19
CLCN6-206ENST00000376496 IWS1Q96ST2 819 aa13.89□□□□□ -0.19
CLCN6-206ENST00000376496 OLFML3Q9NRN5 406 aa13.89□□□□□ -0.19
CLCN6-206ENST00000376496 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.89□□□□□ -0.191e-6■■■□□ 18.1
CLCN6-206ENST00000376496 WDR81Q562E7 1941 aa13.89□□□□□ -0.19
CLCN6-206ENST00000376496 K7ENM7 598 aa13.88□□□□□ -0.19
CLCN6-206ENST00000376496 TPM2P07951 284 aa13.88□□□□□ -0.19
CLCN6-206ENST00000376496 MUTP22033 750 aa13.88□□□□□ -0.19
CLCN6-206ENST00000376496 GUCY2CP25092 1073 aa13.88□□□□□ -0.19
CLCN6-206ENST00000376496 ZNF131P52739 623 aa13.88□□□□□ -0.19
CLCN6-206ENST00000376496 KCTD2Q14681 263 aa13.88□□□□□ -0.19
CLCN6-206ENST00000376496 MAN2A1Q16706 1144 aa13.88□□□□□ -0.19
CLCN6-206ENST00000376496 FBXO16Q8IX29 292 aaPredicted RBP13.88□□□□□ -0.19
CLCN6-206ENST00000376496 CHP1Q99653 195 aa13.88□□□□□ -0.19
CLCN6-206ENST00000376496 ABHD10Q9NUJ1 306 aa13.88□□□□□ -0.19
CLCN6-206ENST00000376496 SEPT9Q9UHD8 586 aaPredicted RBP13.88□□□□□ -0.19
CLCN6-206ENST00000376496 SOCS7O14512 581 aa13.88□□□□□ -0.19
CLCN6-206ENST00000376496 NRDCO43847 1150 aa13.88□□□□□ -0.19
CLCN6-206ENST00000376496 AKAP3O75969 853 aa13.88□□□□□ -0.19
CLCN6-206ENST00000376496 TRIM21P19474 475 aaKnown RBP13.88□□□□□ -0.19
CLCN6-206ENST00000376496 CCDC112Q8NEF3 446 aa13.88□□□□□ -0.19
CLCN6-206ENST00000376496 CEP170P1Q96L14 293 aa13.88□□□□□ -0.19
CLCN6-206ENST00000376496 MMRN2Q9H8L6 949 aa13.88□□□□□ -0.19
CLCN6-206ENST00000376496 DBR1Q9UK59 544 aaKnown RBP13.88□□□□□ -0.19
CLCN6-206ENST00000376496 PCDHB13Q9Y5F0 798 aa13.88□□□□□ -0.19
CLCN6-206ENST00000376496 SLC16A4O15374 487 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 MAFGO15525 162 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 STBD1O95210 358 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 NR3C1P04150 777 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 PEX3P56589 373 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 PRKCEQ02156 737 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 FKBP15Q5T1M5 1219 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 ABHD15Q6UXT9 468 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 COPS5Q92905 334 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 PTPN18Q99952 460 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 CETN3O15182 167 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 FGFR1OPO95684 399 aaKnown RBP13.87□□□□□ -0.19
CLCN6-206ENST00000376496 PSAPP07602 524 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 ATP4AP20648 1035 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 CYP2J2P51589 502 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 MTERF2Q49AM1 385 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 C2orf69Q8N8R5 385 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 PANX2Q96RD6 677 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 PDGFCQ9NRA1 345 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 ODF2LQ9ULJ1 636 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 A0A1W2PQC6 194 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 ARHGAP6O43182 974 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 STX10O60499 249 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 KIF20AO95235 890 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 LYPLA2O95372 231 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 SLC25A27O95847 323 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 TPM1P09493 284 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 EDNRBP24530 442 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 CNGA4Q8IV77 575 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 KCTD17Q8N5Z5 321 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 RDH13Q8NBN7 331 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 BSNDQ8WZ55 320 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 CDHR1Q96JP9 859 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 TYW1Q9NV66 732 aaKnown RBP13.87□□□□□ -0.19
CLCN6-206ENST00000376496 TRAF3IP3Q9Y228 551 aa13.87□□□□□ -0.19
CLCN6-206ENST00000376496 ZNFX1Q9P2E3 1918 aaKnown RBP13.86□□□□□ -0.19
CLCN6-206ENST00000376496 SYNGAP1Q96PV0 1343 aa13.86□□□□□ -0.19
CLCN6-206ENST00000376496 GGPS1O95749 300 aa13.86□□□□□ -0.19
CLCN6-206ENST00000376496 SUPT20HL2P0C7V6 817 aa13.86□□□□□ -0.19
CLCN6-206ENST00000376496 CETPP11597 493 aa13.86□□□□□ -0.19
CLCN6-206ENST00000376496 KCNMA1Q12791 1236 aa13.86□□□□□ -0.19
CLCN6-206ENST00000376496 PTPN14Q15678 1187 aa13.86□□□□□ -0.19
CLCN6-206ENST00000376496 BMT2Q1RMZ1 405 aa13.86□□□□□ -0.19
CLCN6-206ENST00000376496 DCAF17Q5H9S7 520 aaPredicted RBP13.86□□□□□ -0.19
CLCN6-206ENST00000376496 GJC2Q5T442 439 aaPredicted RBP13.86□□□□□ -0.19
CLCN6-206ENST00000376496 ZSWIM2Q8NEG5 633 aa13.86□□□□□ -0.19
CLCN6-206ENST00000376496 SENP7Q9BQF6 1050 aa13.86□□□□□ -0.19
CLCN6-206ENST00000376496 PCIF1Q9H4Z3 704 aa13.86□□□□□ -0.19
CLCN6-206ENST00000376496 SIK3Q9Y2K2 1263 aa13.86□□□□□ -0.19
CLCN6-206ENST00000376496 USP20Q9Y2K6 914 aa13.86□□□□□ -0.19
CLCN6-206ENST00000376496 PPP2R2CQ9Y2T4 447 aa13.86□□□□□ -0.19
CLCN6-206ENST00000376496 LUC7L2Q9Y383 392 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms