RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 M0QZ92 97 aa13.84□□□□□ -0.19
LSM2-208ENST00000375661 LINC01565O15544 149 aa13.84□□□□□ -0.19
LSM2-208ENST00000375661 ATP9AO75110 1047 aa13.84□□□□□ -0.19
LSM2-208ENST00000375661 CTDNEP1O95476 244 aa13.84□□□□□ -0.19
LSM2-208ENST00000375661 ITGB1P05556 798 aa13.84□□□□□ -0.19
LSM2-208ENST00000375661 IFNAR1P17181 557 aa13.84□□□□□ -0.19
LSM2-208ENST00000375661 GTF2F1P35269 517 aaKnown RBP eCLIP13.84□□□□□ -0.19
LSM2-208ENST00000375661 PTPN5P54829 565 aa13.84□□□□□ -0.19
LSM2-208ENST00000375661 CBX2Q14781 532 aaPredicted RBP13.84□□□□□ -0.19
LSM2-208ENST00000375661 PHKBQ93100 1093 aa13.84□□□□□ -0.19
LSM2-208ENST00000375661 GTF3C6Q969F1 213 aa13.84□□□□□ -0.19
LSM2-208ENST00000375661 AGO3Q9H9G7 860 aaKnown RBP13.84□□□□□ -0.19
LSM2-208ENST00000375661 RNF216Q9NWF9 866 aaPredicted RBP13.84□□□□□ -0.19
LSM2-208ENST00000375661 TRPV2Q9Y5S1 764 aa13.84□□□□□ -0.19
LSM2-208ENST00000375661 UBIAD1Q9Y5Z9 338 aa13.84□□□□□ -0.19
LSM2-208ENST00000375661 KDM3AQ9Y4C1 1321 aa13.84□□□□□ -0.19
LSM2-208ENST00000375661 TMEM221A6NGB7 291 aa13.83□□□□□ -0.2
LSM2-208ENST00000375661 M0R296 226 aa13.83□□□□□ -0.2
LSM2-208ENST00000375661 PRPF3O43395 683 aaKnown RBP13.83□□□□□ -0.2
LSM2-208ENST00000375661 DTNBO60941 627 aa13.83□□□□□ -0.2
LSM2-208ENST00000375661 ITGB5P18084 799 aa13.83□□□□□ -0.2
LSM2-208ENST00000375661 DNAJB1P25685 340 aa13.83□□□□□ -0.2
LSM2-208ENST00000375661 MARK3P27448 753 aa13.83□□□□□ -0.2
LSM2-208ENST00000375661 CD52P31358 61 aa13.83□□□□□ -0.2
LSM2-208ENST00000375661 UBE3AQ05086 875 aa13.83□□□□□ -0.2
LSM2-208ENST00000375661 MTMR1Q13613 665 aa13.83□□□□□ -0.2
LSM2-208ENST00000375661 TRIM67Q6ZTA4 783 aa13.83□□□□□ -0.2
LSM2-208ENST00000375661 RTN4RL1Q86UN2 441 aaPredicted RBP13.83□□□□□ -0.2
LSM2-208ENST00000375661 NME8Q8N427 588 aa13.83□□□□□ -0.2
LSM2-208ENST00000375661 KLHL23Q8NBE8 558 aa13.83□□□□□ -0.2
LSM2-208ENST00000375661 POF1BQ8WVV4 589 aa13.83□□□□□ -0.2
LSM2-208ENST00000375661 LINC01599Q8WXQ3 324 aa13.83□□□□□ -0.2
LSM2-208ENST00000375661 ZSCAN31Q96LW9 406 aaPredicted RBP13.83□□□□□ -0.2
LSM2-208ENST00000375661 CLEC1BQ9P126 229 aa13.83□□□□□ -0.2
LSM2-208ENST00000375661 PCDHA2Q9Y5H9 948 aa13.83□□□□□ -0.2
LSM2-208ENST00000375661 IGSF9BQ9UPX0 1349 aa13.83□□□□□ -0.2
LSM2-208ENST00000375661 CPLX1O14810 134 aa13.82□□□□□ -0.2
LSM2-208ENST00000375661 SCG2P13521 617 aa13.82□□□□□ -0.2
LSM2-208ENST00000375661 INSRRP14616 1297 aa13.82□□□□□ -0.2
LSM2-208ENST00000375661 ATF7P17544 494 aaPredicted RBP13.82□□□□□ -0.2
LSM2-208ENST00000375661 ZXDAP98168 799 aa13.82□□□□□ -0.2
LSM2-208ENST00000375661 ADGRD2Q7Z7M1 963 aa13.82□□□□□ -0.2
LSM2-208ENST00000375661 TEX2Q8IWB9 1127 aa13.82□□□□□ -0.2
LSM2-208ENST00000375661 SUGP1Q8IWZ8 645 aaKnown RBP13.82□□□□□ -0.2
LSM2-208ENST00000375661 PBXIP1Q96AQ6 731 aa13.82□□□□□ -0.2
LSM2-208ENST00000375661 PHF7Q9BWX1 381 aaPredicted RBP13.82□□□□□ -0.2
LSM2-208ENST00000375661 SLC26A6Q9BXS9 759 aa13.82□□□□□ -0.2
LSM2-208ENST00000375661 RNF26Q9BY78 433 aaPredicted RBP13.82□□□□□ -0.2
LSM2-208ENST00000375661 AZI2Q9H6S1 392 aa13.82□□□□□ -0.2
LSM2-208ENST00000375661 PSTPIP2Q9H939 334 aa13.82□□□□□ -0.2
LSM2-208ENST00000375661 JADE2Q9NQC1 790 aa13.82□□□□□ -0.2
LSM2-208ENST00000375661 SH2B1Q9NRF2 756 aaPredicted RBP13.82□□□□□ -0.2
LSM2-208ENST00000375661 C5orf42Q9H799 3197 aa13.82□□□□□ -0.2
LSM2-208ENST00000375661 SPDYE3A6NKU9 549 aa13.81□□□□□ -0.2
LSM2-208ENST00000375661 MCM2P49736 904 aa13.81□□□□□ -0.2
LSM2-208ENST00000375661 IGBP1P78318 339 aa13.81□□□□□ -0.2
LSM2-208ENST00000375661 PAK2Q13177 524 aa13.81□□□□□ -0.2
LSM2-208ENST00000375661 PFKFB3Q16875 520 aaPredicted RBP13.81□□□□□ -0.2
LSM2-208ENST00000375661 ODR4Q5SWX8 454 aa13.81□□□□□ -0.2
LSM2-208ENST00000375661 WWC2Q6AWC2 1192 aa13.81□□□□□ -0.2
LSM2-208ENST00000375661 PDE12Q6L8Q7 609 aaKnown RBP13.81□□□□□ -0.2
LSM2-208ENST00000375661 TYW1BQ6NUM6 668 aa13.81□□□□□ -0.2
LSM2-208ENST00000375661 PLPPR4Q7Z2D5 763 aa13.81□□□□□ -0.2
LSM2-208ENST00000375661 CCDC83Q8IWF9 413 aa13.81□□□□□ -0.2
LSM2-208ENST00000375661 NSUN7Q8NE18 718 aaKnown RBP13.81□□□□□ -0.2
LSM2-208ENST00000375661 PRSS33Q8NF86 280 aa13.81□□□□□ -0.2
LSM2-208ENST00000375661 TMX3Q96JJ7 454 aa13.81□□□□□ -0.2
LSM2-208ENST00000375661 CDCA3Q99618 268 aaPredicted RBP13.81□□□□□ -0.2
LSM2-208ENST00000375661 CELF4Q9BZC1 486 aaKnown RBP13.81□□□□□ -0.2
LSM2-208ENST00000375661 FAM49AQ9H0Q0 323 aaPredicted RBP13.81□□□□□ -0.2
LSM2-208ENST00000375661 JPH1Q9HDC5 661 aaPredicted RBP13.81□□□□□ -0.2
LSM2-208ENST00000375661 AAASQ9NRG9 546 aa13.81□□□□□ -0.2
LSM2-208ENST00000375661 LRFN2Q9ULH4 789 aa13.81□□□□□ -0.2
LSM2-208ENST00000375661 PADI3Q9ULW8 664 aa13.81□□□□□ -0.2
LSM2-208ENST00000375661 USP15Q9Y4E8 981 aaPredicted RBP13.81□□□□□ -0.2
LSM2-208ENST00000375661 NFASCO94856 1347 aa13.81□□□□□ -0.2
LSM2-208ENST00000375661 EVPLQ92817 2033 aa13.81□□□□□ -0.2
LSM2-208ENST00000375661 SMIM35A0A1B0GVV1 85 aa13.8□□□□□ -0.2
LSM2-208ENST00000375661 CSPG5O95196 566 aa13.8□□□□□ -0.2
LSM2-208ENST00000375661 FDPSP14324 419 aaKnown RBP13.8□□□□□ -0.2
LSM2-208ENST00000375661 NRIP1P48552 1158 aa13.8□□□□□ -0.2
LSM2-208ENST00000375661 SARSP49591 514 aaKnown RBP13.8□□□□□ -0.2
LSM2-208ENST00000375661 SLC26A2P50443 739 aa13.8□□□□□ -0.2
LSM2-208ENST00000375661 SSRP1Q08945 709 aaKnown RBP13.8□□□□□ -0.2
LSM2-208ENST00000375661 SIGLEC14Q08ET2 396 aa13.8□□□□□ -0.2
LSM2-208ENST00000375661 CPLX2Q6PUV4 134 aaKnown RBP13.8□□□□□ -0.2
LSM2-208ENST00000375661 FBXL6Q8N531 539 aa13.8□□□□□ -0.2
LSM2-208ENST00000375661 PCYT2Q99447 389 aa13.8□□□□□ -0.2
LSM2-208ENST00000375661 IRF2BPLQ9H1B7 796 aa13.8□□□□□ -0.2
LSM2-208ENST00000375661 TLE6Q9H808 572 aa13.8□□□□□ -0.2
LSM2-208ENST00000375661 C1orf112Q9NSG2 853 aa13.8□□□□□ -0.2
LSM2-208ENST00000375661 SLC9A2Q9UBY0 812 aa13.8□□□□□ -0.2
LSM2-208ENST00000375661 PCDHB12Q9Y5F1 795 aa13.8□□□□□ -0.2
LSM2-208ENST00000375661 MYH9P35579 1960 aaKnown RBP13.8□□□□□ -0.2
LSM2-208ENST00000375661 JAK2O60674 1132 aa13.79□□□□□ -0.2
LSM2-208ENST00000375661 CDKL5O76039 1030 aa13.79□□□□□ -0.2
LSM2-208ENST00000375661 GLP2RO95838 553 aa13.79□□□□□ -0.2
LSM2-208ENST00000375661 SRGAP2BP0DMP2 458 aa13.79□□□□□ -0.2
LSM2-208ENST00000375661 STAT5BP51692 787 aa13.79□□□□□ -0.2
LSM2-208ENST00000375661 KRT76Q01546 638 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms