RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 KDM3AQ9Y4C1 1321 aa16.1■□□□□ 0.17
PTCH1-202ENST00000375271 LOXHD1Q8IVV2 1947 aa16.09■□□□□ 0.17
PTCH1-202ENST00000375271 DDX39AO00148 427 aaKnown RBP16.09■□□□□ 0.17
PTCH1-202ENST00000375271 SH2B2O14492 632 aaPredicted RBP16.09■□□□□ 0.17
PTCH1-202ENST00000375271 SGSM2O43147 1006 aa16.09■□□□□ 0.17
PTCH1-202ENST00000375271 HOXA2O43364 376 aa16.09■□□□□ 0.17
PTCH1-202ENST00000375271 HBP1O60381 514 aa16.09■□□□□ 0.17
PTCH1-202ENST00000375271 FOSP01100 380 aaPredicted RBP16.09■□□□□ 0.17
PTCH1-202ENST00000375271 ATF7P17544 494 aaPredicted RBP16.09■□□□□ 0.17
PTCH1-202ENST00000375271 KLRC1P26715 233 aa16.09■□□□□ 0.17
PTCH1-202ENST00000375271 CA8P35219 290 aa16.09■□□□□ 0.17
PTCH1-202ENST00000375271 BMS1Q14692 1282 aaKnown RBP16.09■□□□□ 0.17
PTCH1-202ENST00000375271 PLPP4Q5VZY2 271 aa16.09■□□□□ 0.17
PTCH1-202ENST00000375271 SLC24A5Q71RS6 500 aa16.09■□□□□ 0.17
PTCH1-202ENST00000375271 RTN4RL1Q86UN2 441 aaPredicted RBP16.09■□□□□ 0.17
PTCH1-202ENST00000375271 RAB11FIP4Q86YS3 637 aa16.09■□□□□ 0.17
PTCH1-202ENST00000375271 TMEM87AQ8NBN3 555 aa16.09■□□□□ 0.17
PTCH1-202ENST00000375271 TSHZ2Q9NRE2 1034 aa16.09■□□□□ 0.17
PTCH1-202ENST00000375271 PCDHGC5Q9Y5F6 944 aa16.09■□□□□ 0.17
PTCH1-202ENST00000375271 TAF6LQ9Y6J9 622 aa16.09■□□□□ 0.17
PTCH1-202ENST00000375271 PLXNA4Q9HCM2 1894 aa16.08■□□□□ 0.17
PTCH1-202ENST00000375271 GLP2RO95838 553 aa16.08■□□□□ 0.16
PTCH1-202ENST00000375271 TECP42680 631 aa16.08■□□□□ 0.16
PTCH1-202ENST00000375271 ADCY7P51828 1080 aa16.08■□□□□ 0.16
PTCH1-202ENST00000375271 KRT17Q04695 432 aa16.08■□□□□ 0.16
PTCH1-202ENST00000375271 CBX2Q14781 532 aaPredicted RBP16.08■□□□□ 0.16
PTCH1-202ENST00000375271 CEP55Q53EZ4 464 aa16.08■□□□□ 0.16
PTCH1-202ENST00000375271 MIS18BP1Q6P0N0 1132 aa16.08■□□□□ 0.16
PTCH1-202ENST00000375271 PDXDC2PQ6P474 469 aa16.08■□□□□ 0.16
PTCH1-202ENST00000375271 COLGALT1Q8NBJ5 622 aa16.08■□□□□ 0.16
PTCH1-202ENST00000375271 ATOH1Q92858 354 aaPredicted RBP16.08■□□□□ 0.16
PTCH1-202ENST00000375271 PCYT2Q99447 389 aa16.08■□□□□ 0.16
PTCH1-202ENST00000375271 GLT8D2Q9H1C3 349 aa16.08■□□□□ 0.16
PTCH1-202ENST00000375271 NR2E1Q9Y466 385 aa16.08■□□□□ 0.16
PTCH1-202ENST00000375271 TECTAO75443 2155 aa16.08■□□□□ 0.16
PTCH1-202ENST00000375271 TRIOO75962 3097 aa16.07■□□□□ 0.16
PTCH1-202ENST00000375271 GFRA3O60609 400 aa16.07■□□□□ 0.16
PTCH1-202ENST00000375271 PPM1AP35813 382 aa16.07■□□□□ 0.16
PTCH1-202ENST00000375271 LIFRP42702 1097 aa16.07■□□□□ 0.16
PTCH1-202ENST00000375271 DUSP6Q16828 381 aa16.07■□□□□ 0.16
PTCH1-202ENST00000375271 ZNF484Q5JVG2 852 aa16.07■□□□□ 0.16
PTCH1-202ENST00000375271 IER5LQ5T953 404 aa16.07■□□□□ 0.16
PTCH1-202ENST00000375271 CES5AQ6NT32 575 aa16.07■□□□□ 0.16
PTCH1-202ENST00000375271 PPP1R18Q6NYC8 613 aa16.07■□□□□ 0.16
PTCH1-202ENST00000375271 LLGL2Q6P1M3 1020 aa16.07■□□□□ 0.16
PTCH1-202ENST00000375271 TMTC3Q6ZXV5 915 aa16.07■□□□□ 0.16
PTCH1-202ENST00000375271 TEX2Q8IWB9 1127 aa16.07■□□□□ 0.16
PTCH1-202ENST00000375271 METTL13Q8N6R0 699 aa16.07■□□□□ 0.16
PTCH1-202ENST00000375271 FANCBQ8NB91 859 aa16.07■□□□□ 0.16
PTCH1-202ENST00000375271 ATP8B4Q8TF62 1192 aa16.07■□□□□ 0.16
PTCH1-202ENST00000375271 MAP4K1Q92918 833 aa16.07■□□□□ 0.16
PTCH1-202ENST00000375271 SCLT1Q96NL6 688 aa16.07■□□□□ 0.16
PTCH1-202ENST00000375271 PPP1R16BQ96T49 567 aa16.07■□□□□ 0.16
PTCH1-202ENST00000375271 TCF25Q9BQ70 676 aa16.07■□□□□ 0.16
PTCH1-202ENST00000375271 ANO3Q9BYT9 981 aa16.07■□□□□ 0.16
PTCH1-202ENST00000375271 ERVK-5Q9HDB9 667 aa16.07■□□□□ 0.16
PTCH1-202ENST00000375271 ZNF302Q9NR11 478 aa16.07■□□□□ 0.16
PTCH1-202ENST00000375271 RGS18Q9NS28 235 aa16.07■□□□□ 0.16
PTCH1-202ENST00000375271 TYW1Q9NV66 732 aaKnown RBP16.07■□□□□ 0.16
PTCH1-202ENST00000375271 RBM28Q9NW13 759 aaKnown RBP16.07■□□□□ 0.16
PTCH1-202ENST00000375271 ST3GAL5Q9UNP4 418 aa16.07■□□□□ 0.16
PTCH1-202ENST00000375271 NOC2LQ9Y3T9 749 aaKnown RBP16.07■□□□□ 0.16
PTCH1-202ENST00000375271 COL1A2P08123 1366 aa16.07■□□□□ 0.16
PTCH1-202ENST00000375271 ZSCAN20P17040 1043 aaPredicted RBP16.06■□□□□ 0.16
PTCH1-202ENST00000375271 SP100P23497 879 aaPredicted RBP16.06■□□□□ 0.16
PTCH1-202ENST00000375271 AP3B2Q13367 1082 aa16.06■□□□□ 0.16
PTCH1-202ENST00000375271 PTPN21Q16825 1174 aa16.06■□□□□ 0.16
PTCH1-202ENST00000375271 TPRNQ4KMQ1 711 aa16.06■□□□□ 0.16
PTCH1-202ENST00000375271 TMC7Q7Z402 723 aa16.06■□□□□ 0.16
PTCH1-202ENST00000375271 PGBD1Q96JS3 809 aa16.06■□□□□ 0.16
PTCH1-202ENST00000375271 YTHDC1Q96MU7 727 aaKnown RBP16.06■□□□□ 0.16
PTCH1-202ENST00000375271 MAP7D2Q96T17 732 aa16.06■□□□□ 0.16
PTCH1-202ENST00000375271 APOL5Q9BWW9 433 aa16.06■□□□□ 0.16
PTCH1-202ENST00000375271 TMX1Q9H3N1 280 aa16.06■□□□□ 0.16
PTCH1-202ENST00000375271 AGO4Q9HCK5 861 aaKnown RBP16.06■□□□□ 0.16
PTCH1-202ENST00000375271 NGRNQ9NPE2 291 aaKnown RBP16.06■□□□□ 0.16
PTCH1-202ENST00000375271 TMEM161AQ9NX61 479 aa16.06■□□□□ 0.16
PTCH1-202ENST00000375271 hCG_1984214I3L0E3 225 aa16.05■□□□□ 0.16
PTCH1-202ENST00000375271 ARP10275 920 aa16.05■□□□□ 0.16
PTCH1-202ENST00000375271 HOXB8P17481 243 aaPredicted RBP16.05■□□□□ 0.16
PTCH1-202ENST00000375271 TMOD1P28289 359 aa16.05■□□□□ 0.16
PTCH1-202ENST00000375271 CRYBB1P53674 252 aaPredicted RBP16.05■□□□□ 0.16
PTCH1-202ENST00000375271 KIZQ2M2Z5 673 aa16.05■□□□□ 0.16
PTCH1-202ENST00000375271 FAM102BQ5T8I3 360 aa16.05■□□□□ 0.16
PTCH1-202ENST00000375271 TRMT1LQ7Z2T5 733 aaKnown RBP16.05■□□□□ 0.16
PTCH1-202ENST00000375271 CRIPAKQ8N1N5 446 aa16.05■□□□□ 0.16
PTCH1-202ENST00000375271 LRRC43Q8N309 656 aa16.05■□□□□ 0.16
PTCH1-202ENST00000375271 ZNF713Q8N859 430 aaPredicted RBP16.05■□□□□ 0.16
PTCH1-202ENST00000375271 RNF169Q8NCN4 708 aa16.05■□□□□ 0.16
PTCH1-202ENST00000375271 MRPS27Q92552 414 aaKnown RBP16.05■□□□□ 0.16
PTCH1-202ENST00000375271 CASP10Q92851 521 aa16.05■□□□□ 0.16
PTCH1-202ENST00000375271 ZNF558Q96NG5 402 aa16.05■□□□□ 0.16
PTCH1-202ENST00000375271 PHOX2BQ99453 314 aa16.05■□□□□ 0.16
PTCH1-202ENST00000375271 OSMRQ99650 979 aa16.05■□□□□ 0.16
PTCH1-202ENST00000375271 RIC8AQ9NPQ8 531 aa16.05■□□□□ 0.16
PTCH1-202ENST00000375271 FAM86C1Q9NVL1 165 aa16.05■□□□□ 0.16
PTCH1-202ENST00000375271 CEP131Q9UPN4 1083 aa16.05■□□□□ 0.16
PTCH1-202ENST00000375271 LZTS1Q9Y250 596 aa16.05■□□□□ 0.16
PTCH1-202ENST00000375271 FNDC1Q4ZHG4 1894 aaPredicted RBP16.04■□□□□ 0.16
PTCH1-202ENST00000375271 SPDYE4A6NLX3 237 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms