RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 ZNF577Q9BSK1 485 aa13.24□□□□□ -0.29
NPLOC4-202ENST00000374747 MED10Q9BTT4 135 aa13.24□□□□□ -0.29
NPLOC4-202ENST00000374747 NHEJ1Q9H9Q4 299 aaPredicted RBP13.24□□□□□ -0.29
NPLOC4-202ENST00000374747 KIF1AQ12756 1690 aa13.24□□□□□ -0.29
NPLOC4-202ENST00000374747 M0QZ92 97 aa13.24□□□□□ -0.29
NPLOC4-202ENST00000374747 OSBPP22059 807 aa13.24□□□□□ -0.29
NPLOC4-202ENST00000374747 PIK3CAP42336 1068 aa13.24□□□□□ -0.29
NPLOC4-202ENST00000374747 IREB2P48200 963 aaKnown RBP13.24□□□□□ -0.29
NPLOC4-202ENST00000374747 LRRC23Q53EV4 343 aaPredicted RBP13.24□□□□□ -0.29
NPLOC4-202ENST00000374747 PCDHB6Q9Y5E3 794 aa13.24□□□□□ -0.29
NPLOC4-202ENST00000374747 A6NJR5 290 aa13.24□□□□□ -0.29
NPLOC4-202ENST00000374747 HOXA7P31268 230 aaPredicted RBP13.24□□□□□ -0.29
NPLOC4-202ENST00000374747 PSMC2P35998 433 aaKnown RBP13.24□□□□□ -0.29
NPLOC4-202ENST00000374747 PTPN21Q16825 1174 aa13.24□□□□□ -0.29
NPLOC4-202ENST00000374747 RSBN1LQ6PCB5 846 aaPredicted RBP13.24□□□□□ -0.29
NPLOC4-202ENST00000374747 MMS22LQ6ZRQ5 1243 aa13.24□□□□□ -0.29
NPLOC4-202ENST00000374747 FKBP3Q00688 224 aaKnown RBP13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 GRM4Q14833 912 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 ODR4Q5SWX8 454 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 CDHR1Q96JP9 859 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 FUCA2Q9BTY2 467 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 ADD3Q9UEY8 706 aaKnown RBP13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 NALCNQ8IZF0 1738 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 SLCO1A2P46721 670 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 FMO2Q99518 471 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 SMYD2Q9NRG4 433 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 NOP53Q9NZM5 478 aaKnown RBP13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 MYO1CO00159 1063 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 EXOSC10Q01780 885 aaKnown RBP13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 CYP4A11Q02928 519 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 AP3B2Q13367 1082 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 RAPH1Q70E73 1250 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 FBXO33Q7Z6M2 555 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 NEDD1Q8NHV4 660 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 ABTB1Q969K4 478 aaPredicted RBP13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 NRBP2Q9NSY0 501 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 MT-ND3P03897 115 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 ITKQ08881 620 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 CUL1Q13616 776 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 PPP2R5AQ15172 486 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 C12orf60Q5U649 245 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 SLC44A5Q8NCS7 719 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 ATP6V0A1Q93050 837 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 THAP9Q9H5L6 903 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 SAMSN1Q9NSI8 373 aaKnown RBP13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 PACSIN2Q9UNF0 486 aaPredicted RBP13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 USP17L5A8MUK1 530 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 TRPA1O75762 1119 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 EIF4A3P38919 411 aaKnown RBP13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 SNX1Q13596 522 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 PRPSAP1Q14558 356 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 STRIP1Q5VSL9 837 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 KRT80Q6KB66 452 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 TADA2BQ86TJ2 420 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 SLC17A8Q8NDX2 589 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 POMGNT1Q8WZA1 660 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 CEP95Q96GE4 821 aa13.23□□□□□ -0.29
NPLOC4-202ENST00000374747 GOLGA8CPA6NN73 597 aa13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 ZBTB5O15062 677 aa13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 CPP00450 1065 aa13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 FAM160B1Q5W0V3 765 aa13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 PPP1R2P3Q6NXS1 205 aa13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 PPP1R18Q6NYC8 613 aa13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 PGBD1Q96JS3 809 aa13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 ORC6Q9Y5N6 252 aa13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 UBN2Q6ZU65 1347 aa13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 A0A0G2JLW4 131 aa13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 GAP43P17677 238 aa13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 IL1RL1Q01638 556 aa13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 SBK1Q52WX2 424 aa13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 FAM186BQ8IYM0 893 aa13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 XRN1Q8IZH2 1706 aaKnown RBP13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 FAM133AQ8N9E0 248 aa13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 CCDC138Q96M89 665 aa13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 ADPGKQ9BRR6 497 aa13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 ZMYND12Q9H0C1 365 aa13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 ADCY2Q08462 1091 aa13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 C6orf118Q5T5N4 469 aa13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 RAB44Q7Z6P3 723 aaPredicted RBP13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 ZNF341Q9BYN7 854 aa13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 SPC25Q9HBM1 224 aa13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 PCDHA13Q9Y5I0 950 aa13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 ESYT2A0FGR8 921 aa13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 SERPING1P05155 500 aa13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 TMOD1P28289 359 aa13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 STOX1Q6ZVD7 989 aa13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 METTL13Q8N6R0 699 aa13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 SCINQ9Y6U3 715 aa13.22□□□□□ -0.29
NPLOC4-202ENST00000374747 EXOC1LA0A1B0GW35 172 aa13.21□□□□□ -0.29
NPLOC4-202ENST00000374747 OATP04181 439 aa13.21□□□□□ -0.29
NPLOC4-202ENST00000374747 ESRRAP11474 423 aaPredicted RBP13.21□□□□□ -0.29
NPLOC4-202ENST00000374747 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.21□□□□□ -0.29
NPLOC4-202ENST00000374747 SLC10A5Q5PT55 438 aa13.21□□□□□ -0.29
NPLOC4-202ENST00000374747 ST13P4Q8IZP2 240 aaPredicted RBP13.21□□□□□ -0.29
NPLOC4-202ENST00000374747 CENPKQ9BS16 269 aa13.21□□□□□ -0.29
NPLOC4-202ENST00000374747 ANO3Q9BYT9 981 aa13.21□□□□□ -0.29
NPLOC4-202ENST00000374747 TBK1Q9UHD2 729 aa13.21□□□□□ -0.29
NPLOC4-202ENST00000374747 GNGT2O14610 69 aa13.21□□□□□ -0.29
NPLOC4-202ENST00000374747 DR1Q01658 176 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms