RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 WDR24Q96S15 920 aa13.86□□□□□ -0.19
PRPF4-202ENST00000374199 CEP89Q96ST8 783 aa13.86□□□□□ -0.19
PRPF4-202ENST00000374199 CEP72Q9P209 647 aa13.86□□□□□ -0.19
PRPF4-202ENST00000374199 DAAM1Q9Y4D1 1078 aa13.86□□□□□ -0.19
PRPF4-202ENST00000374199 PLXNA1Q9UIW2 1896 aa13.86□□□□□ -0.19
PRPF4-202ENST00000374199 NR3C2P08235 984 aa13.86□□□□□ -0.19
PRPF4-202ENST00000374199 MIER3Q7Z3K6 550 aa13.86□□□□□ -0.19
PRPF4-202ENST00000374199 NTPCRQ9BSD7 190 aaKnown RBP13.86□□□□□ -0.19
PRPF4-202ENST00000374199 TMOD4Q9NZQ9 345 aa13.86□□□□□ -0.19
PRPF4-202ENST00000374199 A0A0U1RQJ8 604 aa13.86□□□□□ -0.19
PRPF4-202ENST00000374199 WDR64B1ANS9 1081 aa13.86□□□□□ -0.19
PRPF4-202ENST00000374199 AKAP3O75969 853 aa13.86□□□□□ -0.19
PRPF4-202ENST00000374199 GTF2BQ00403 316 aa13.86□□□□□ -0.19
PRPF4-202ENST00000374199 LDLRAD1Q5T700 205 aa13.86□□□□□ -0.19
PRPF4-202ENST00000374199 SYT10Q6XYQ8 523 aa13.86□□□□□ -0.19
PRPF4-202ENST00000374199 CPXCR1Q8N123 301 aa13.86□□□□□ -0.19
PRPF4-202ENST00000374199 ATRIPQ8WXE1 791 aa13.86□□□□□ -0.19
PRPF4-202ENST00000374199 MOV10L1Q9BXT6 1211 aaKnown RBP13.86□□□□□ -0.19
PRPF4-202ENST00000374199 DNAI1Q9UI46 699 aa13.86□□□□□ -0.19
PRPF4-202ENST00000374199 PLXNB2O15031 1838 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 PSMC5P62195 406 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 NCBP1Q09161 790 aaKnown RBP13.85□□□□□ -0.19
PRPF4-202ENST00000374199 PPIL2Q13356 520 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 PDXDC1Q6P996 788 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 BANK1Q8NDB2 785 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 OLIG1Q8TAK6 271 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 DESI2Q9BSY9 194 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 SIX2Q9NPC8 291 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 AIPL1Q9NZN9 384 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 EPN1Q9Y6I3 576 aaPredicted RBP13.85□□□□□ -0.19
PRPF4-202ENST00000374199 LOC102724159A0A0B4J2E5 919 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 SSU72P8A0A1W2PR75 194 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 ADM5C9JUS6 153 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 NR3C1P04150 777 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 EIF2AK2P19525 551 aaKnown RBP13.85□□□□□ -0.19
PRPF4-202ENST00000374199 ADAM9Q13443 819 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 PWP2Q15269 919 aaKnown RBP13.85□□□□□ -0.19
PRPF4-202ENST00000374199 ABHD15Q6UXT9 468 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 SLC35C1Q96A29 364 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 CDHR1Q96JP9 859 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 NUCKS1Q9H1E3 243 aaKnown RBP13.85□□□□□ -0.19
PRPF4-202ENST00000374199 METTL14Q9HCE5 456 aaKnown RBP13.85□□□□□ -0.19
PRPF4-202ENST00000374199 BTBD7Q9P203 1132 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 MRFAP1Q9Y605 127 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 ZNFX1Q9P2E3 1918 aaKnown RBP13.85□□□□□ -0.19
PRPF4-202ENST00000374199 TRAF5O00463 557 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 ZNF263O14978 683 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 HIP1RO75146 1068 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 TBCAO75347 108 aaKnown RBP13.85□□□□□ -0.19
PRPF4-202ENST00000374199 NR2F2P24468 414 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 JAM2P57087 298 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 KCNA1Q09470 495 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 ARHGEF16Q5VV41 709 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 SLC17A8Q8NDX2 589 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 HVCN1Q96D96 273 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 ERO1AQ96HE7 468 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 FGD4Q96M96 766 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 RNF181Q9P0P0 153 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 ARHGAP20Q9P2F6 1191 aa13.85□□□□□ -0.19
PRPF4-202ENST00000374199 CETN3O15182 167 aa13.84□□□□□ -0.19
PRPF4-202ENST00000374199 PJA2O43164 708 aa13.84□□□□□ -0.19
PRPF4-202ENST00000374199 PLS3P13797 630 aa13.84□□□□□ -0.19
PRPF4-202ENST00000374199 TUBB2AQ13885 445 aa13.84□□□□□ -0.19
PRPF4-202ENST00000374199 PADI6Q6TGC4 694 aa13.84□□□□□ -0.19
PRPF4-202ENST00000374199 ERO1BQ86YB8 467 aa13.84□□□□□ -0.19
PRPF4-202ENST00000374199 GOLGA5Q8TBA6 731 aa13.84□□□□□ -0.19
PRPF4-202ENST00000374199 TUBB2BQ9BVA1 445 aa13.84□□□□□ -0.19
PRPF4-202ENST00000374199 TBC1D7Q9P0N9 293 aa13.84□□□□□ -0.19
PRPF4-202ENST00000374199 DNAJC25-GNG10A0A024R161 153 aa13.84□□□□□ -0.19
PRPF4-202ENST00000374199 TLR2O60603 784 aa13.84□□□□□ -0.19
PRPF4-202ENST00000374199 SSBP05455 408 aaKnown RBP eCLIP13.84□□□□□ -0.19
PRPF4-202ENST00000374199 YWHABP31946 246 aaKnown RBP13.84□□□□□ -0.19
PRPF4-202ENST00000374199 AMPD2Q01433 879 aa13.84□□□□□ -0.19
PRPF4-202ENST00000374199 C9orf131Q5VYM1 1079 aa13.84□□□□□ -0.19
PRPF4-202ENST00000374199 GPAT2Q6NUI2 795 aa13.84□□□□□ -0.19
PRPF4-202ENST00000374199 FAM133AQ8N9E0 248 aa13.84□□□□□ -0.19
PRPF4-202ENST00000374199 CPLX3Q8WVH0 158 aa13.84□□□□□ -0.19
PRPF4-202ENST00000374199 DCPSQ96C86 337 aaKnown RBP13.84□□□□□ -0.19
PRPF4-202ENST00000374199 CDCA5Q96FF9 252 aa13.84□□□□□ -0.19
PRPF4-202ENST00000374199 NHEJ1Q9H9Q4 299 aaPredicted RBP13.84□□□□□ -0.19
PRPF4-202ENST00000374199 C17orf75Q9HAS0 396 aa13.84□□□□□ -0.19
PRPF4-202ENST00000374199 CHMP2AO43633 222 aa13.83□□□□□ -0.19
PRPF4-202ENST00000374199 PRPF6O94906 941 aaKnown RBP13.83□□□□□ -0.19
PRPF4-202ENST00000374199 ANO5Q75V66 913 aa13.83□□□□□ -0.19
PRPF4-202ENST00000374199 NLRX1Q86UT6 975 aa13.83□□□□□ -0.19
PRPF4-202ENST00000374199 ACRBPQ8NEB7 543 aa13.83□□□□□ -0.19
PRPF4-202ENST00000374199 EEF2KMTQ96G04 330 aa13.83□□□□□ -0.19
PRPF4-202ENST00000374199 AGPAT3Q9NRZ7 376 aa13.83□□□□□ -0.19
PRPF4-202ENST00000374199 FBXO40Q9UH90 709 aa13.83□□□□□ -0.19
PRPF4-202ENST00000374199 AGTPBP1Q9UPW5 1226 aa13.83□□□□□ -0.19
PRPF4-202ENST00000374199 MYH9P35579 1960 aaKnown RBP13.83□□□□□ -0.2
PRPF4-202ENST00000374199 IREB2P48200 963 aaKnown RBP13.83□□□□□ -0.2
PRPF4-202ENST00000374199 PPP2R5AQ15172 486 aa13.83□□□□□ -0.2
PRPF4-202ENST00000374199 NELFCDQ8IXH7 590 aa13.83□□□□□ -0.2
PRPF4-202ENST00000374199 SPIRE2Q8WWL2 714 aa13.83□□□□□ -0.2
PRPF4-202ENST00000374199 HOMER2Q9NSB8 354 aa13.83□□□□□ -0.2
PRPF4-202ENST00000374199 MAFBQ9Y5Q3 323 aaPredicted RBP13.83□□□□□ -0.2
PRPF4-202ENST00000374199 TRIM21P19474 475 aaKnown RBP13.83□□□□□ -0.2
PRPF4-202ENST00000374199 SCP2P22307 547 aa13.83□□□□□ -0.2
PRPF4-202ENST00000374199 RPL13P26373 211 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms