RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 KRT19P08727 400 aa12.85□□□□□ -0.35
PACSIN1-202ENST00000374043 PLA2G4AP47712 749 aa12.85□□□□□ -0.35
PACSIN1-202ENST00000374043 STRN3Q13033 797 aa12.85□□□□□ -0.35
PACSIN1-202ENST00000374043 WDR44Q5JSH3 913 aa12.85□□□□□ -0.35
PACSIN1-202ENST00000374043 MCF2L2Q86YR7 1114 aa12.85□□□□□ -0.35
PACSIN1-202ENST00000374043 PROM2Q8N271 834 aa12.85□□□□□ -0.35
PACSIN1-202ENST00000374043 METTL13Q8N6R0 699 aa12.85□□□□□ -0.35
PACSIN1-202ENST00000374043 DDX47Q9H0S4 455 aaKnown RBP12.85□□□□□ -0.35
PACSIN1-202ENST00000374043 KMT5AQ9NQR1 393 aa12.85□□□□□ -0.35
PACSIN1-202ENST00000374043 SERPINA10Q9UK55 444 aa12.85□□□□□ -0.35
PACSIN1-202ENST00000374043 BAZ2AQ9UIF9 1905 aaKnown RBP12.85□□□□□ -0.35
PACSIN1-202ENST00000374043 NOP56O00567 594 aaKnown RBP12.85□□□□□ -0.35
PACSIN1-202ENST00000374043 LIG4P49917 911 aa12.85□□□□□ -0.35
PACSIN1-202ENST00000374043 DMP1Q13316 513 aaPredicted RBP12.85□□□□□ -0.35
PACSIN1-202ENST00000374043 SNRNP48Q6IEG0 339 aaKnown RBP12.85□□□□□ -0.35
PACSIN1-202ENST00000374043 CCDC105Q8IYK2 499 aa12.85□□□□□ -0.35
PACSIN1-202ENST00000374043 PURBQ96QR8 312 aaKnown RBP12.85□□□□□ -0.35
PACSIN1-202ENST00000374043 PAIP2Q9BPZ3 127 aaKnown RBP12.85□□□□□ -0.35
PACSIN1-202ENST00000374043 IMPG2Q9BZV3 1241 aa12.85□□□□□ -0.35
PACSIN1-202ENST00000374043 POLGP54098 1239 aaPredicted RBP12.85□□□□□ -0.35
PACSIN1-202ENST00000374043 PAK2Q13177 524 aa12.85□□□□□ -0.35
PACSIN1-202ENST00000374043 SPATA4Q8NEY3 305 aa12.85□□□□□ -0.35
PACSIN1-202ENST00000374043 LRRC15Q8TF66 581 aa12.85□□□□□ -0.35
PACSIN1-202ENST00000374043 ZKSCAN4Q969J2 545 aaPredicted RBP12.85□□□□□ -0.35
PACSIN1-202ENST00000374043 TBC1D8O95759 1140 aa12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 UCHL3P15374 230 aa12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 H2AFXP16104 143 aaPredicted RBP12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 GAP43P17677 238 aa12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 RPA1P27694 616 aa12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 NT5C2P49902 561 aa12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 PTK2Q05397 1052 aa12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 USP37Q86T82 979 aa12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 CEP63Q96MT8 703 aa12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 RNF146Q9NTX7 359 aa12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 TYW1Q9NV66 732 aaKnown RBP12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 DNAJC17Q9NVM6 304 aaKnown RBP12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 HERC5Q9UII4 1024 aaKnown RBP12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 CD19P15391 556 aa12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 MXI1P50539 228 aa12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 SOX10P56693 466 aa12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 SNX1Q13596 522 aa12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 WDR59Q6PJI9 974 aa12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 PRPF38AQ8NAV1 312 aaKnown RBP12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 CCDC26Q8TAB7 109 aa12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 VCPKMTQ9H867 229 aa12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 AKAP3O75969 853 aa12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 EYA4O95677 639 aa12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 NF2P35240 595 aa12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 GGCXP38435 758 aa12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 BAATQ14032 418 aaPredicted RBP12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 ZNF394Q53GI3 561 aa12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 EAPPQ56P03 285 aaPredicted RBP12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 SWSAP1Q6NVH7 229 aa12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 DEPTORQ8TB45 409 aa12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 RPGRIP1Q96KN7 1286 aa12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 DNAJC7Q99615 494 aa12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 RPAP3Q9H6T3 665 aaPredicted RBP12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 PLAGL2Q9UPG8 496 aa12.84□□□□□ -0.35
PACSIN1-202ENST00000374043 SASH3O75995 380 aa12.83□□□□□ -0.35
PACSIN1-202ENST00000374043 INPP5BP32019 993 aa12.83□□□□□ -0.35
PACSIN1-202ENST00000374043 ARHGAP25P42331 645 aa12.83□□□□□ -0.35
PACSIN1-202ENST00000374043 USP14P54578 494 aa12.83□□□□□ -0.35
PACSIN1-202ENST00000374043 IRX3P78415 501 aaPredicted RBP12.83□□□□□ -0.35
PACSIN1-202ENST00000374043 SEL1L2Q5TEA6 688 aa12.83□□□□□ -0.35
PACSIN1-202ENST00000374043 MCTP2Q6DN12 878 aa12.83□□□□□ -0.35
PACSIN1-202ENST00000374043 CAPN12Q6ZSI9 719 aa12.83□□□□□ -0.35
PACSIN1-202ENST00000374043 FAM160B2Q86V87 743 aa12.83□□□□□ -0.35
PACSIN1-202ENST00000374043 MICALL2Q8IY33 904 aa12.83□□□□□ -0.35
PACSIN1-202ENST00000374043 IQCDQ96DY2 449 aa12.83□□□□□ -0.35
PACSIN1-202ENST00000374043 ERGIC2Q96RQ1 377 aa12.83□□□□□ -0.35
PACSIN1-202ENST00000374043 PPANQ9NQ55 473 aaKnown RBP12.83□□□□□ -0.35
PACSIN1-202ENST00000374043 ZNRF3Q9ULT6 936 aa12.83□□□□□ -0.35
PACSIN1-202ENST00000374043 SNX12Q9UMY4 172 aa12.83□□□□□ -0.35
PACSIN1-202ENST00000374043 UTP11Q9Y3A2 253 aaKnown RBP12.83□□□□□ -0.35
PACSIN1-202ENST00000374043 SPDYE2BA6NHP3 402 aa12.83□□□□□ -0.36
PACSIN1-202ENST00000374043 TISP43B9A030 160 aa12.83□□□□□ -0.36
PACSIN1-202ENST00000374043 NDUFAB1O14561 156 aa12.83□□□□□ -0.36
PACSIN1-202ENST00000374043 SPDYE6P0CI01 402 aa12.83□□□□□ -0.36
PACSIN1-202ENST00000374043 SMARCA1P28370 1054 aa12.83□□□□□ -0.36
PACSIN1-202ENST00000374043 COPB2P35606 906 aa12.83□□□□□ -0.36
PACSIN1-202ENST00000374043 GNGT1P63211 74 aa12.83□□□□□ -0.36
PACSIN1-202ENST00000374043 GIT2Q14161 759 aa12.83□□□□□ -0.36
PACSIN1-202ENST00000374043 KRT71Q3SY84 523 aa12.83□□□□□ -0.36
PACSIN1-202ENST00000374043 RINT1Q6NUQ1 792 aa12.83□□□□□ -0.36
PACSIN1-202ENST00000374043 FAM151AQ8WW52 585 aa12.83□□□□□ -0.36
PACSIN1-202ENST00000374043 GABBR1Q9UBS5 961 aa12.83□□□□□ -0.36
PACSIN1-202ENST00000374043 ASIC3Q9UHC3 531 aa12.83□□□□□ -0.36
PACSIN1-202ENST00000374043 EXOC7Q9UPT5 735 aa12.83□□□□□ -0.36
PACSIN1-202ENST00000374043 EMSYQ7Z589 1322 aa12.83□□□□□ -0.36
PACSIN1-202ENST00000374043 CTNNA1P35221 906 aaKnown RBP12.83□□□□□ -0.36
PACSIN1-202ENST00000374043 HNRNPH2P55795 449 aaKnown RBP12.83□□□□□ -0.36
PACSIN1-202ENST00000374043 EPC2Q52LR7 807 aa12.83□□□□□ -0.36
PACSIN1-202ENST00000374043 ZBTB33Q86T24 672 aa12.83□□□□□ -0.36
PACSIN1-202ENST00000374043 DNAJC18Q9H819 358 aa12.83□□□□□ -0.36
PACSIN1-202ENST00000374043 RBM12Q9NTZ6 932 aaKnown RBP12.83□□□□□ -0.36
PACSIN1-202ENST00000374043 BCL9LQ86UU0 1499 aa12.83□□□□□ -0.36
PACSIN1-202ENST00000374043 LRRC10BA6NIK2 292 aa12.83□□□□□ -0.36
PACSIN1-202ENST00000374043 MEIS2O14770 477 aa12.83□□□□□ -0.36
PACSIN1-202ENST00000374043 ENTPD3O75355 529 aa12.83□□□□□ -0.36
PACSIN1-202ENST00000374043 CETN2P41208 172 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms