RNA–Protein interactions for RNA: ENST00000372857.7

PABPC4-202, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 3,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-202ENST00000372857 AGAP11Q8TF27 550 aa17.23■□□□□ 0.35
PABPC4-202ENST00000372857 TMEM47Q9BQJ4 181 aa17.23■□□□□ 0.35
PABPC4-202ENST00000372857 FGGP02679 453 aa17.22■□□□□ 0.35
PABPC4-202ENST00000372857 USP17L2Q6R6M4 530 aa17.22■□□□□ 0.35
PABPC4-202ENST00000372857 HOOK2Q96ED9 719 aa17.22■□□□□ 0.35
PABPC4-202ENST00000372857 AZI2Q9H6S1 392 aa17.22■□□□□ 0.35
PABPC4-202ENST00000372857 COL22A1Q8NFW1 1626 aaPredicted RBP17.22■□□□□ 0.35
PABPC4-202ENST00000372857 NPHP3-ACAD11A0A0J9YXS1 232 aa17.22■□□□□ 0.35
PABPC4-202ENST00000372857 SPDYE3A6NKU9 549 aa17.22■□□□□ 0.35
PABPC4-202ENST00000372857 ADRA2BP18089 450 aa17.22■□□□□ 0.35
PABPC4-202ENST00000372857 KCNH2Q12809 1159 aa17.22■□□□□ 0.35
PABPC4-202ENST00000372857 ARHGAP27Q6ZUM4 889 aa17.22■□□□□ 0.35
PABPC4-202ENST00000372857 TAX1BP1Q86VP1 789 aa17.22■□□□□ 0.35
PABPC4-202ENST00000372857 SH3RF3Q8TEJ3 882 aaPredicted RBP17.22■□□□□ 0.35
PABPC4-202ENST00000372857 ATP8B4Q8TF62 1192 aa17.22■□□□□ 0.35
PABPC4-202ENST00000372857 TBC1D22AQ8WUA7 517 aa17.22■□□□□ 0.35
PABPC4-202ENST00000372857 TGFBRAP1Q8WUH2 860 aa17.22■□□□□ 0.35
PABPC4-202ENST00000372857 ATXN2LQ8WWM7 1075 aaKnown RBP17.22■□□□□ 0.35
PABPC4-202ENST00000372857 PRCCQ92733 491 aaPredicted RBP17.22■□□□□ 0.35
PABPC4-202ENST00000372857 SPDL1Q96EA4 605 aa17.22■□□□□ 0.35
PABPC4-202ENST00000372857 CCDC113Q9H0I3 377 aa17.22■□□□□ 0.35
PABPC4-202ENST00000372857 SAMD15Q9P1V8 674 aa17.22■□□□□ 0.35
PABPC4-202ENST00000372857 PALM3A6NDB9 673 aaPredicted RBP17.21■□□□□ 0.35
PABPC4-202ENST00000372857 CALRP27797 417 aaKnown RBP17.21■□□□□ 0.35
PABPC4-202ENST00000372857 GCKP35557 465 aa17.21■□□□□ 0.35
PABPC4-202ENST00000372857 SLCO1A2P46721 670 aa17.21■□□□□ 0.35
PABPC4-202ENST00000372857 IFI16Q16666 785 aaKnown RBP17.21■□□□□ 0.35
PABPC4-202ENST00000372857 TMEM266Q2M3C6 531 aa17.21■□□□□ 0.35
PABPC4-202ENST00000372857 KRT79Q5XKE5 535 aa17.21■□□□□ 0.35
PABPC4-202ENST00000372857 TRPM8Q7Z2W7 1104 aa17.21■□□□□ 0.35
PABPC4-202ENST00000372857 REXO1Q8N1G1 1221 aaKnown RBP17.21■□□□□ 0.35
PABPC4-202ENST00000372857 MTMR9Q96QG7 549 aa17.21■□□□□ 0.35
PABPC4-202ENST00000372857 ADAM7Q9H2U9 754 aa17.21■□□□□ 0.35
PABPC4-202ENST00000372857 ZHX3Q9H4I2 956 aa17.21■□□□□ 0.35
PABPC4-202ENST00000372857 SLITRK6Q9H5Y7 841 aa17.21■□□□□ 0.35
PABPC4-202ENST00000372857 EBF2Q9HAK2 575 aa17.21■□□□□ 0.35
PABPC4-202ENST00000372857 FAM114A2Q9NRY5 505 aa17.21■□□□□ 0.35
PABPC4-202ENST00000372857 C15orf41Q9Y2V0 281 aa17.21■□□□□ 0.35
PABPC4-202ENST00000372857 GNA11P29992 359 aa17.21■□□□□ 0.35
PABPC4-202ENST00000372857 PEX19P40855 299 aa17.21■□□□□ 0.35
PABPC4-202ENST00000372857 SF3B3Q15393 1217 aaKnown RBP17.21■□□□□ 0.35
PABPC4-202ENST00000372857 HOOK3Q86VS8 718 aa17.21■□□□□ 0.35
PABPC4-202ENST00000372857 GLG1Q92896 1179 aa17.21■□□□□ 0.35
PABPC4-202ENST00000372857 DNAJC19Q96DA6 116 aa17.21■□□□□ 0.35
PABPC4-202ENST00000372857 CCNL1Q9UK58 526 aaPredicted RBP17.21■□□□□ 0.35
PABPC4-202ENST00000372857 PPFIA2O75334 1257 aa17.21■□□□□ 0.34
PABPC4-202ENST00000372857 SBK1Q52WX2 424 aa17.21■□□□□ 0.34
PABPC4-202ENST00000372857 FBXO33Q7Z6M2 555 aa17.21■□□□□ 0.34
PABPC4-202ENST00000372857 PIGSQ96S52 555 aa17.21■□□□□ 0.34
PABPC4-202ENST00000372857 EPB41L4BQ9H329 900 aa17.21■□□□□ 0.34
PABPC4-202ENST00000372857 INTS9Q9NV88 658 aaKnown RBP17.21■□□□□ 0.34
PABPC4-202ENST00000372857 UBOX5O94941 541 aa17.2■□□□□ 0.34
PABPC4-202ENST00000372857 PLTPP55058 493 aa17.2■□□□□ 0.34
PABPC4-202ENST00000372857 SLC8A3P57103 927 aa17.2■□□□□ 0.34
PABPC4-202ENST00000372857 PSMD2Q13200 908 aa17.2■□□□□ 0.34
PABPC4-202ENST00000372857 ADAM9Q13443 819 aa17.2■□□□□ 0.34
PABPC4-202ENST00000372857 ARHGEF1Q92888 912 aaKnown RBP17.2■□□□□ 0.34
PABPC4-202ENST00000372857 UBA5Q9GZZ9 404 aa17.2■□□□□ 0.34
PABPC4-202ENST00000372857 A8MUI8 341 aa17.2■□□□□ 0.34
PABPC4-202ENST00000372857 BTNL10A8MVZ5 291 aa17.2■□□□□ 0.34
PABPC4-202ENST00000372857 DIAPH2O60879 1101 aa17.2■□□□□ 0.34
PABPC4-202ENST00000372857 CCDC38Q502W7 563 aa17.2■□□□□ 0.34
PABPC4-202ENST00000372857 PIGWQ7Z7B1 504 aa17.2■□□□□ 0.34
PABPC4-202ENST00000372857 CEP120Q8N960 986 aa17.2■□□□□ 0.34
PABPC4-202ENST00000372857 RBM46Q8TBY0 533 aaKnown RBP17.2■□□□□ 0.34
PABPC4-202ENST00000372857 CENPTQ96BT3 561 aa17.2■□□□□ 0.34
PABPC4-202ENST00000372857 HGSO14964 777 aaPredicted RBP17.19■□□□□ 0.34
PABPC4-202ENST00000372857 RGS16O15492 202 aaPredicted RBP17.19■□□□□ 0.34
PABPC4-202ENST00000372857 UCHL3P15374 230 aa17.19■□□□□ 0.34
PABPC4-202ENST00000372857 EIF3BP55884 814 aaKnown RBP17.19■□□□□ 0.34
PABPC4-202ENST00000372857 BZW1Q7L1Q6 419 aaKnown RBP17.19■□□□□ 0.34
PABPC4-202ENST00000372857 NT5DC3Q86UY8 548 aa17.19■□□□□ 0.34
PABPC4-202ENST00000372857 ZNF444Q8N0Y2 327 aaPredicted RBP17.19■□□□□ 0.34
PABPC4-202ENST00000372857 KIF2BQ8N4N8 673 aa17.19■□□□□ 0.34
PABPC4-202ENST00000372857 MAB21L3Q8N8X9 362 aa17.19■□□□□ 0.34
PABPC4-202ENST00000372857 LMBR1Q8WVP7 490 aa17.19■□□□□ 0.34
PABPC4-202ENST00000372857 RNF25Q96BH1 459 aaPredicted RBP17.19■□□□□ 0.34
PABPC4-202ENST00000372857 OSGEPQ9NPF4 335 aa17.19■□□□□ 0.34
PABPC4-202ENST00000372857 SNX24Q9Y343 169 aa17.19■□□□□ 0.34
PABPC4-202ENST00000372857 LAMB1P07942 1786 aa17.19■□□□□ 0.34
PABPC4-202ENST00000372857 ROBO1Q9Y6N7 1651 aa17.19■□□□□ 0.34
PABPC4-202ENST00000372857 EIF4E1BA6NMX2 242 aaKnown RBP17.19■□□□□ 0.34
PABPC4-202ENST00000372857 ASAP2O43150 1006 aa17.19■□□□□ 0.34
PABPC4-202ENST00000372857 SLURP2P0DP57 97 aa17.19■□□□□ 0.34
PABPC4-202ENST00000372857 PMS2P54278 862 aa17.19■□□□□ 0.34
PABPC4-202ENST00000372857 ZNF211Q13398 564 aaPredicted RBP17.19■□□□□ 0.34
PABPC4-202ENST00000372857 C12orf60Q5U649 245 aa17.19■□□□□ 0.34
PABPC4-202ENST00000372857 DENND2CQ68D51 928 aa17.19■□□□□ 0.34
PABPC4-202ENST00000372857 SPICE1Q8N0Z3 855 aa17.19■□□□□ 0.34
PABPC4-202ENST00000372857 RASGEF1CQ8N431 466 aa17.19■□□□□ 0.34
PABPC4-202ENST00000372857 U2AF1L4Q8WU68 220 aaKnown RBP17.19■□□□□ 0.34
PABPC4-202ENST00000372857 CEP63Q96MT8 703 aa17.19■□□□□ 0.34
PABPC4-202ENST00000372857 ZNF570Q96NI8 536 aa17.19■□□□□ 0.34
PABPC4-202ENST00000372857 SEC63Q9UGP8 760 aaKnown RBP17.19■□□□□ 0.34
PABPC4-202ENST00000372857 AJAP1Q9UKB5 411 aaPredicted RBP17.19■□□□□ 0.34
PABPC4-202ENST00000372857 TRPC6Q9Y210 931 aa17.19■□□□□ 0.34
PABPC4-202ENST00000372857 GSTA1P08263 222 aa17.18■□□□□ 0.34
PABPC4-202ENST00000372857 MMP13P45452 471 aa17.18■□□□□ 0.34
PABPC4-202ENST00000372857 FXR2P51116 673 aaKnown RBP eCLIP17.18■□□□□ 0.342e-6■■■□□ 17.1
PABPC4-202ENST00000372857 ALDH5A1P51649 535 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms