RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 KLRC1P26715 233 aa16.6■□□□□ 0.25
COL9A1-204ENST00000370496 CCT6AP40227 531 aaKnown RBP16.6■□□□□ 0.25
COL9A1-204ENST00000370496 ZNF618Q5T7W0 954 aa16.6■□□□□ 0.25
COL9A1-204ENST00000370496 ANO5Q75V66 913 aa16.6■□□□□ 0.25
COL9A1-204ENST00000370496 METTL13Q8N6R0 699 aa16.6■□□□□ 0.25
COL9A1-204ENST00000370496 IGSF22Q8N9C0 903 aa16.6■□□□□ 0.25
COL9A1-204ENST00000370496 SNX29Q8TEQ0 813 aa16.6■□□□□ 0.25
COL9A1-204ENST00000370496 DNAJB3Q8WWF6 145 aa16.6■□□□□ 0.25
COL9A1-204ENST00000370496 ZNF396Q96N95 335 aaPredicted RBP16.6■□□□□ 0.25
COL9A1-204ENST00000370496 TUFT1Q9NNX1 390 aa16.6■□□□□ 0.25
COL9A1-204ENST00000370496 PCDHA2Q9Y5H9 948 aa16.6■□□□□ 0.25
COL9A1-204ENST00000370496 CLIC4Q9Y696 253 aa16.6■□□□□ 0.25
COL9A1-204ENST00000370496 STK24Q9Y6E0 443 aa16.6■□□□□ 0.25
COL9A1-204ENST00000370496 EVPLQ92817 2033 aa16.59■□□□□ 0.25
COL9A1-204ENST00000370496 SMIM35A0A1B0GVV1 85 aa16.59■□□□□ 0.25
COL9A1-204ENST00000370496 RSPH10B2B2RC85 870 aa16.59■□□□□ 0.25
COL9A1-204ENST00000370496 MAGEB2O15479 319 aa16.59■□□□□ 0.25
COL9A1-204ENST00000370496 MED24O75448 989 aa16.59■□□□□ 0.25
COL9A1-204ENST00000370496 SLITRK3O94933 977 aa16.59■□□□□ 0.25
COL9A1-204ENST00000370496 IQCF3P0C7M6 154 aa16.59■□□□□ 0.25
COL9A1-204ENST00000370496 RSPH10BP0C881 870 aa16.59■□□□□ 0.25
COL9A1-204ENST00000370496 RFC2P35250 354 aa16.59■□□□□ 0.25
COL9A1-204ENST00000370496 FOXD4L6Q3SYB3 417 aaPredicted RBP16.59■□□□□ 0.25
COL9A1-204ENST00000370496 KRT79Q5XKE5 535 aa16.59■□□□□ 0.25
COL9A1-204ENST00000370496 PSRC1Q6PGN9 363 aaPredicted RBP16.59■□□□□ 0.25
COL9A1-204ENST00000370496 POTEGQ6S5H5 508 aa16.59■□□□□ 0.25
COL9A1-204ENST00000370496 FOXD4L3Q6VB84 417 aaPredicted RBP16.59■□□□□ 0.25
COL9A1-204ENST00000370496 OTUD6AQ7L8S5 288 aa16.59■□□□□ 0.25
COL9A1-204ENST00000370496 DEFB128Q7Z7B8 93 aa16.59■□□□□ 0.25
COL9A1-204ENST00000370496 CEP170P1Q96L14 293 aa16.59■□□□□ 0.25
COL9A1-204ENST00000370496 MAP7D2Q96T17 732 aa16.59■□□□□ 0.25
COL9A1-204ENST00000370496 HSD17B14Q9BPX1 270 aa16.59■□□□□ 0.25
COL9A1-204ENST00000370496 SH2D3AQ9BRG2 576 aa16.59■□□□□ 0.25
COL9A1-204ENST00000370496 POLR3CQ9BUI4 534 aaPredicted RBP16.59■□□□□ 0.25
COL9A1-204ENST00000370496 NIFKQ9BYG3 293 aaKnown RBP16.59■□□□□ 0.25
COL9A1-204ENST00000370496 IL23AQ9NPF7 189 aa16.59■□□□□ 0.25
COL9A1-204ENST00000370496 PP2D1A8MPX8 630 aa16.58■□□□□ 0.24
COL9A1-204ENST00000370496 STBD1O95210 358 aa16.58■□□□□ 0.24
COL9A1-204ENST00000370496 PARNO95453 639 aaKnown RBP16.58■□□□□ 0.24
COL9A1-204ENST00000370496 PFKMP08237 780 aa16.58■□□□□ 0.24
COL9A1-204ENST00000370496 RPA1P27694 616 aa16.58■□□□□ 0.24
COL9A1-204ENST00000370496 CLCN3P51790 818 aa16.58■□□□□ 0.24
COL9A1-204ENST00000370496 POLGP54098 1239 aaPredicted RBP16.58■□□□□ 0.24
COL9A1-204ENST00000370496 MRPS6P82932 125 aaKnown RBP16.58■□□□□ 0.24
COL9A1-204ENST00000370496 TMEM62Q0P6H9 643 aa16.58■□□□□ 0.24
COL9A1-204ENST00000370496 PDIA5Q14554 519 aa16.58■□□□□ 0.24
COL9A1-204ENST00000370496 IL17AQ16552 155 aa16.58■□□□□ 0.24
COL9A1-204ENST00000370496 XKR9Q5GH70 373 aa16.58■□□□□ 0.24
COL9A1-204ENST00000370496 CATSPER3Q86XQ3 398 aa16.58■□□□□ 0.24
COL9A1-204ENST00000370496 USP28Q96RU2 1077 aa16.58■□□□□ 0.24
COL9A1-204ENST00000370496 CYP26B1Q9NR63 512 aa16.58■□□□□ 0.24
COL9A1-204ENST00000370496 LYPLA2O95372 231 aa16.57■□□□□ 0.24
COL9A1-204ENST00000370496 SPATA31C1P0DKV0 1188 aa16.57■□□□□ 0.24
COL9A1-204ENST00000370496 ACRP10323 421 aa16.57■□□□□ 0.24
COL9A1-204ENST00000370496 TMOD1P28289 359 aa16.57■□□□□ 0.24
COL9A1-204ENST00000370496 BMP8BP34820 402 aa16.57■□□□□ 0.24
COL9A1-204ENST00000370496 NPEPPSP55786 919 aa16.57■□□□□ 0.24
COL9A1-204ENST00000370496 STK38Q15208 465 aa16.57■□□□□ 0.24
COL9A1-204ENST00000370496 TARBP2Q15633 366 aaKnown RBP16.57■□□□□ 0.24
COL9A1-204ENST00000370496 ZRSR1Q15695 479 aaKnown RBP16.57■□□□□ 0.24
COL9A1-204ENST00000370496 RPAINQ86UA6 219 aa16.57■□□□□ 0.24
COL9A1-204ENST00000370496 RPUSD2Q8IZ73 545 aaKnown RBP16.57■□□□□ 0.24
COL9A1-204ENST00000370496 LRRC71Q8N4P6 559 aa16.57■□□□□ 0.24
COL9A1-204ENST00000370496 SLC7A3Q8WY07 619 aa16.57■□□□□ 0.24
COL9A1-204ENST00000370496 CDK5RAP3Q96JB5 506 aa16.57■□□□□ 0.24
COL9A1-204ENST00000370496 JPH2Q9BR39 696 aaPredicted RBP16.57■□□□□ 0.24
COL9A1-204ENST00000370496 BMP2KQ9NSY1 1161 aaPredicted RBP16.57■□□□□ 0.24
COL9A1-204ENST00000370496 COLQQ9Y215 455 aaPredicted RBP16.57■□□□□ 0.24
COL9A1-204ENST00000370496 AKT3Q9Y243 479 aa16.57■□□□□ 0.24
COL9A1-204ENST00000370496 PPME1Q9Y570 386 aa16.57■□□□□ 0.24
COL9A1-204ENST00000370496 KDM3AQ9Y4C1 1321 aa16.57■□□□□ 0.24
COL9A1-204ENST00000370496 BRD1O95696 1058 aa16.56■□□□□ 0.24
COL9A1-204ENST00000370496 MARCKSP29966 332 aaPredicted RBP16.56■□□□□ 0.24
COL9A1-204ENST00000370496 RFC5P40937 340 aa16.56■□□□□ 0.24
COL9A1-204ENST00000370496 EPHB4P54760 987 aa16.56■□□□□ 0.24
COL9A1-204ENST00000370496 PTPAQ15257 358 aa16.56■□□□□ 0.24
COL9A1-204ENST00000370496 IER5Q5VY09 327 aa16.56■□□□□ 0.24
COL9A1-204ENST00000370496 EFCAB12Q6NXP0 572 aa16.56■□□□□ 0.24
COL9A1-204ENST00000370496 TRAF7Q6Q0C0 670 aa16.56■□□□□ 0.24
COL9A1-204ENST00000370496 TDHQ8IZJ6 230 aa16.56■□□□□ 0.24
COL9A1-204ENST00000370496 RASSF8Q8NHQ8 419 aa16.56■□□□□ 0.24
COL9A1-204ENST00000370496 PIGOQ8TEQ8 1089 aa16.56■□□□□ 0.24
COL9A1-204ENST00000370496 AK8Q96MA6 479 aa16.56■□□□□ 0.24
COL9A1-204ENST00000370496 PPP1R16BQ96T49 567 aa16.56■□□□□ 0.24
COL9A1-204ENST00000370496 SUGCTQ9HAC7 445 aa16.56■□□□□ 0.24
COL9A1-204ENST00000370496 ANKEF1Q9NU02 776 aa16.56■□□□□ 0.24
COL9A1-204ENST00000370496 GINS2Q9Y248 185 aa16.56■□□□□ 0.24
COL9A1-204ENST00000370496 TRPV2Q9Y5S1 764 aa16.56■□□□□ 0.24
COL9A1-204ENST00000370496 CDY2AQ9Y6F7 541 aa16.56■□□□□ 0.24
COL9A1-204ENST00000370496 ZBTB39O15060 712 aa16.55■□□□□ 0.24
COL9A1-204ENST00000370496 MUTP22033 750 aa16.55■□□□□ 0.24
COL9A1-204ENST00000370496 CDC25AP30304 524 aa16.55■□□□□ 0.24
COL9A1-204ENST00000370496 LONP1P36776 959 aaKnown RBP16.55■□□□□ 0.24
COL9A1-204ENST00000370496 NASPP49321 788 aaPredicted RBP16.55■□□□□ 0.24
COL9A1-204ENST00000370496 DNM2P50570 870 aa16.55■□□□□ 0.24
COL9A1-204ENST00000370496 EMC2Q15006 297 aa16.55■□□□□ 0.24
COL9A1-204ENST00000370496 EXOC8Q8IYI6 725 aa16.55■□□□□ 0.24
COL9A1-204ENST00000370496 NME8Q8N427 588 aa16.55■□□□□ 0.24
COL9A1-204ENST00000370496 RNPC3Q96LT9 517 aaKnown RBP16.55■□□□□ 0.24
COL9A1-204ENST00000370496 SCLT1Q96NL6 688 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms