RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 LINC01465Q8N7H1 131 aa23.18■■□□□ 1.3
SMNDC1-201ENST00000369592 APBB2Q92870 758 aa23.18■■□□□ 1.3
SMNDC1-201ENST00000369592 SLC28A3Q9HAS3 691 aa23.18■■□□□ 1.3
SMNDC1-201ENST00000369592 CA3P07451 260 aa23.17■■□□□ 1.3
SMNDC1-201ENST00000369592 PPP2R5CQ13362 524 aa23.17■■□□□ 1.3
SMNDC1-201ENST00000369592 DIS3L2Q8IYB7 885 aaKnown RBP23.17■■□□□ 1.3
SMNDC1-201ENST00000369592 FAM167AQ96KS9 214 aa23.17■■□□□ 1.3
SMNDC1-201ENST00000369592 TBC1D32Q96NH3 1257 aa23.17■■□□□ 1.3
SMNDC1-201ENST00000369592 CEP89Q96ST8 783 aa23.17■■□□□ 1.3
SMNDC1-201ENST00000369592 NAP1L4Q99733 375 aaKnown RBP23.17■■□□□ 1.3
SMNDC1-201ENST00000369592 IFIH1Q9BYX4 1025 aaKnown RBP23.17■■□□□ 1.3
SMNDC1-201ENST00000369592 FAM49AQ9H0Q0 323 aaPredicted RBP23.17■■□□□ 1.3
SMNDC1-201ENST00000369592 AGO3Q9H9G7 860 aaKnown RBP23.17■■□□□ 1.3
SMNDC1-201ENST00000369592 TCEAL9Q9UHQ7 104 aa23.17■■□□□ 1.3
SMNDC1-201ENST00000369592 EML1O00423 815 aa23.16■■□□□ 1.3
SMNDC1-201ENST00000369592 GHRP10912 638 aa23.16■■□□□ 1.3
SMNDC1-201ENST00000369592 TAP1Q03518 808 aa23.16■■□□□ 1.3
SMNDC1-201ENST00000369592 TARBP2Q15633 366 aaKnown RBP23.16■■□□□ 1.3
SMNDC1-201ENST00000369592 IER5Q5VY09 327 aa23.16■■□□□ 1.3
SMNDC1-201ENST00000369592 SAMM50Q9Y512 469 aa23.16■■□□□ 1.3
SMNDC1-201ENST00000369592 MUC3AQ02505 3323 aa23.15■■□□□ 1.3
SMNDC1-201ENST00000369592 WNT7AO00755 349 aa23.15■■□□□ 1.3
SMNDC1-201ENST00000369592 CHMP2AO43633 222 aa23.15■■□□□ 1.3
SMNDC1-201ENST00000369592 CCNT1O60563 726 aaKnown RBP23.15■■□□□ 1.3
SMNDC1-201ENST00000369592 OATP04181 439 aa23.15■■□□□ 1.3
SMNDC1-201ENST00000369592 HTRA4P83105 476 aaPredicted RBP23.15■■□□□ 1.3
SMNDC1-201ENST00000369592 PRKCEQ02156 737 aa23.15■■□□□ 1.3
SMNDC1-201ENST00000369592 SPIRE1Q08AE8 756 aa23.15■■□□□ 1.3
SMNDC1-201ENST00000369592 TSHZ1Q6ZSZ6 1077 aa23.15■■□□□ 1.3
SMNDC1-201ENST00000369592 MIER3Q7Z3K6 550 aa23.15■■□□□ 1.3
SMNDC1-201ENST00000369592 CELF4Q9BZC1 486 aaKnown RBP23.15■■□□□ 1.3
SMNDC1-201ENST00000369592 BRMS1Q9HCU9 246 aa23.15■■□□□ 1.3
SMNDC1-201ENST00000369592 RAPGEFL1Q9UHV5 662 aa23.15■■□□□ 1.3
SMNDC1-201ENST00000369592 TRPV2Q9Y5S1 764 aa23.15■■□□□ 1.3
SMNDC1-201ENST00000369592 COL4A6Q14031 1691 aa23.14■■□□□ 1.29
SMNDC1-201ENST00000369592 LCHNA4D1U4 455 aa23.14■■□□□ 1.29
SMNDC1-201ENST00000369592 KIF28PB7ZC32 967 aa23.14■■□□□ 1.29
SMNDC1-201ENST00000369592 CD2BP2O95400 341 aaKnown RBP23.14■■□□□ 1.29
SMNDC1-201ENST00000369592 HMGN5P82970 282 aaKnown RBP23.14■■□□□ 1.29
SMNDC1-201ENST00000369592 ADGRE1Q14246 886 aa23.14■■□□□ 1.29
SMNDC1-201ENST00000369592 PPP2R2DQ66LE6 453 aa23.14■■□□□ 1.29
SMNDC1-201ENST00000369592 USP38Q8NB14 1042 aa23.14■■□□□ 1.29
SMNDC1-201ENST00000369592 FBXO18Q8NFZ0 1043 aa23.14■■□□□ 1.29
SMNDC1-201ENST00000369592 TOP1MTQ969P6 601 aa23.14■■□□□ 1.29
SMNDC1-201ENST00000369592 RAD9AQ99638 391 aa23.14■■□□□ 1.29
SMNDC1-201ENST00000369592 NIFKQ9BYG3 293 aaKnown RBP23.14■■□□□ 1.29
SMNDC1-201ENST00000369592 PRDM12Q9H4Q4 367 aa23.14■■□□□ 1.29
SMNDC1-201ENST00000369592 TNFRSF10AO00220 468 aa23.13■■□□□ 1.29
SMNDC1-201ENST00000369592 TLL1O43897 1013 aa23.13■■□□□ 1.29
SMNDC1-201ENST00000369592 TJAP1Q5JTD0 557 aa23.13■■□□□ 1.29
SMNDC1-201ENST00000369592 CKAP2LQ8IYA6 745 aa23.13■■□□□ 1.29
SMNDC1-201ENST00000369592 CRIPAKQ8N1N5 446 aa23.13■■□□□ 1.29
SMNDC1-201ENST00000369592 SP7Q8TDD2 431 aaPredicted RBP23.13■■□□□ 1.29
SMNDC1-201ENST00000369592 CDHR5Q9HBB8 845 aa23.13■■□□□ 1.29
SMNDC1-201ENST00000369592 NRBP2Q9NSY0 501 aa23.13■■□□□ 1.29
SMNDC1-201ENST00000369592 CEP131Q9UPN4 1083 aa23.13■■□□□ 1.29
SMNDC1-201ENST00000369592 MAGEB2O15479 319 aa23.12■■□□□ 1.29
SMNDC1-201ENST00000369592 AMHP03971 560 aa23.12■■□□□ 1.29
SMNDC1-201ENST00000369592 FOSBP53539 338 aa23.12■■□□□ 1.29
SMNDC1-201ENST00000369592 TMEM62Q0P6H9 643 aa23.12■■□□□ 1.29
SMNDC1-201ENST00000369592 TRIM29Q14134 588 aa23.12■■□□□ 1.29
SMNDC1-201ENST00000369592 LINC01599Q8WXQ3 324 aa23.12■■□□□ 1.29
SMNDC1-201ENST00000369592 PRRC2BQ5JSZ5 2229 aaKnown RBP23.11■■□□□ 1.29
SMNDC1-201ENST00000369592 ENPP3O14638 875 aa23.11■■□□□ 1.29
SMNDC1-201ENST00000369592 GPR32O75388 356 aa23.11■■□□□ 1.29
SMNDC1-201ENST00000369592 CD52P31358 61 aa23.11■■□□□ 1.29
SMNDC1-201ENST00000369592 XKR3Q5GH77 459 aa23.11■■□□□ 1.29
SMNDC1-201ENST00000369592 FAM43BQ6ZT52 329 aaPredicted RBP23.11■■□□□ 1.29
SMNDC1-201ENST00000369592 SPRED2Q7Z698 418 aa23.11■■□□□ 1.29
SMNDC1-201ENST00000369592 RTN4RL1Q86UN2 441 aaPredicted RBP23.11■■□□□ 1.29
SMNDC1-201ENST00000369592 C8orf76Q96K31 380 aa23.11■■□□□ 1.29
SMNDC1-201ENST00000369592 MTMR9Q96QG7 549 aa23.11■■□□□ 1.29
SMNDC1-201ENST00000369592 IGKV6-21A0A0C4DH24 114 aa23.1■■□□□ 1.29
SMNDC1-201ENST00000369592 EPOPA6NHQ4 379 aa23.1■■□□□ 1.29
SMNDC1-201ENST00000369592 POU3F3P20264 500 aaPredicted RBP23.1■■□□□ 1.29
SMNDC1-201ENST00000369592 GUCY1B3Q02153 619 aa23.1■■□□□ 1.29
SMNDC1-201ENST00000369592 SLFN12Q8IYM2 578 aa23.1■■□□□ 1.29
SMNDC1-201ENST00000369592 MYOCDQ8IZQ8 938 aa23.1■■□□□ 1.29
SMNDC1-201ENST00000369592 TMEM40Q8WWA1 233 aa23.1■■□□□ 1.29
SMNDC1-201ENST00000369592 FOXP1Q9H334 677 aaPredicted RBP23.1■■□□□ 1.29
SMNDC1-201ENST00000369592 TMX1Q9H3N1 280 aa23.1■■□□□ 1.29
SMNDC1-201ENST00000369592 RC3H2Q9HBD1 1191 aaKnown RBP23.1■■□□□ 1.29
SMNDC1-201ENST00000369592 WRAP73Q9P2S5 460 aaPredicted RBP23.1■■□□□ 1.29
SMNDC1-201ENST00000369592 PADI3Q9ULW8 664 aa23.1■■□□□ 1.29
SMNDC1-201ENST00000369592 INSL6Q9Y581 213 aa23.1■■□□□ 1.29
SMNDC1-201ENST00000369592 ST18O60284 1047 aa23.09■■□□□ 1.29
SMNDC1-201ENST00000369592 PSMC5P62195 406 aa23.09■■□□□ 1.29
SMNDC1-201ENST00000369592 EPHA7Q15375 998 aa23.09■■□□□ 1.29
SMNDC1-201ENST00000369592 ANO5Q75V66 913 aa23.09■■□□□ 1.29
SMNDC1-201ENST00000369592 TRMT1LQ7Z2T5 733 aaKnown RBP23.09■■□□□ 1.29
SMNDC1-201ENST00000369592 TMX3Q96JJ7 454 aa23.09■■□□□ 1.29
SMNDC1-201ENST00000369592 UPF2Q9HAU5 1272 aaKnown RBP23.09■■□□□ 1.29
SMNDC1-201ENST00000369592 ERVK-5Q9HDB9 667 aa23.09■■□□□ 1.29
SMNDC1-201ENST00000369592 LINC01553A4QN01 128 aa23.08■■□□□ 1.29
SMNDC1-201ENST00000369592 TMEM150BA6NC51 233 aa23.08■■□□□ 1.29
SMNDC1-201ENST00000369592 M0QZ92 97 aa23.08■■□□□ 1.29
SMNDC1-201ENST00000369592 QARSP47897 775 aaKnown RBP23.08■■□□□ 1.29
SMNDC1-201ENST00000369592 CLCN3P51790 818 aa23.08■■□□□ 1.29
SMNDC1-201ENST00000369592 EFCAB12Q6NXP0 572 aa23.08■■□□□ 1.29
SMNDC1-201ENST00000369592 BANK1Q8NDB2 785 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms