RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 TBC1D7Q9P0N9 293 aa16.11■□□□□ 0.17
PRKN-204ENST00000366896 POLR2AP24928 1970 aaKnown RBP16.11■□□□□ 0.17
PRKN-204ENST00000366896 IQCA1LA6NCM1 817 aa16.1■□□□□ 0.17
PRKN-204ENST00000366896 KCTD16Q68DU8 428 aa16.1■□□□□ 0.17
PRKN-204ENST00000366896 GLT8D2Q9H1C3 349 aa16.1■□□□□ 0.17
PRKN-204ENST00000366896 TAF1DQ9H5J8 278 aaPredicted RBP16.1■□□□□ 0.17
PRKN-204ENST00000366896 KANSL2Q9H9L4 492 aa16.1■□□□□ 0.17
PRKN-204ENST00000366896 BMP2KQ9NSY1 1161 aaPredicted RBP16.1■□□□□ 0.17
PRKN-204ENST00000366896 DDX25Q9UHL0 483 aaKnown RBP16.1■□□□□ 0.17
PRKN-204ENST00000366896 PITPNM2Q9BZ72 1349 aa16.1■□□□□ 0.17
PRKN-204ENST00000366896 ZNF233A6NK53 670 aa16.1■□□□□ 0.17
PRKN-204ENST00000366896 TLR2O60603 784 aa16.1■□□□□ 0.17
PRKN-204ENST00000366896 FAM26FQ5R3K3 315 aa16.1■□□□□ 0.17
PRKN-204ENST00000366896 KLHDC7AQ5VTJ3 777 aa16.1■□□□□ 0.17
PRKN-204ENST00000366896 CD302Q8IX05 232 aa16.1■□□□□ 0.17
PRKN-204ENST00000366896 ADGRF4Q8IZF3 695 aa16.1■□□□□ 0.17
PRKN-204ENST00000366896 GDF3Q9NR23 364 aa16.1■□□□□ 0.17
PRKN-204ENST00000366896 GRID2IPA4D2P6 1211 aa16.09■□□□□ 0.17
PRKN-204ENST00000366896 NOL4O94818 638 aa16.09■□□□□ 0.17
PRKN-204ENST00000366896 SSBP05455 408 aaKnown RBP eCLIP16.09■□□□□ 0.17
PRKN-204ENST00000366896 SLC16A2P36021 539 aa16.09■□□□□ 0.17
PRKN-204ENST00000366896 PSEN1P49768 467 aa16.09■□□□□ 0.17
PRKN-204ENST00000366896 CACNB1Q02641 598 aaPredicted RBP16.09■□□□□ 0.17
PRKN-204ENST00000366896 ZNF543Q08ER8 600 aa16.09■□□□□ 0.17
PRKN-204ENST00000366896 TDRD12Q587J7 1177 aaKnown RBP16.09■□□□□ 0.17
PRKN-204ENST00000366896 CFAP58Q5T655 872 aa16.09■□□□□ 0.17
PRKN-204ENST00000366896 MREGQ8N565 214 aa16.09■□□□□ 0.17
PRKN-204ENST00000366896 ZNF473Q8WTR7 871 aaKnown RBP16.09■□□□□ 0.17
PRKN-204ENST00000366896 MS4A14Q96JA4 679 aa16.09■□□□□ 0.17
PRKN-204ENST00000366896 RBM12Q9NTZ6 932 aaKnown RBP16.09■□□□□ 0.17
PRKN-204ENST00000366896 HERC5Q9UII4 1024 aaKnown RBP16.09■□□□□ 0.17
PRKN-204ENST00000366896 NPHP3-ACAD11A0A0J9YXS1 232 aa16.09■□□□□ 0.17
PRKN-204ENST00000366896 MRPL12P52815 198 aaKnown RBP16.09■□□□□ 0.17
PRKN-204ENST00000366896 CFAP221Q4G0U5 840 aa16.09■□□□□ 0.17
PRKN-204ENST00000366896 GPATCH4Q5T3I0 446 aaKnown RBP16.09■□□□□ 0.17
PRKN-204ENST00000366896 SFMBT2Q5VUG0 894 aa16.09■□□□□ 0.17
PRKN-204ENST00000366896 TATDN1Q6P1N9 297 aa16.09■□□□□ 0.17
PRKN-204ENST00000366896 PPP4R3CPQ6ZMV5 832 aa16.09■□□□□ 0.17
PRKN-204ENST00000366896 PAXIP1Q6ZW49 1069 aaPredicted RBP16.09■□□□□ 0.17
PRKN-204ENST00000366896 TRIM59Q8IWR1 403 aa16.09■□□□□ 0.17
PRKN-204ENST00000366896 NELFCDQ8IXH7 590 aa16.09■□□□□ 0.17
PRKN-204ENST00000366896 IFT20Q8IY31 132 aa16.09■□□□□ 0.17
PRKN-204ENST00000366896 C1orf131Q8NDD1 294 aaKnown RBP16.09■□□□□ 0.17
PRKN-204ENST00000366896 CCDC43Q96MW1 224 aaKnown RBP16.09■□□□□ 0.17
PRKN-204ENST00000366896 TACO1Q9BSH4 297 aaKnown RBP16.09■□□□□ 0.17
PRKN-204ENST00000366896 PANK4Q9NVE7 773 aa16.09■□□□□ 0.17
PRKN-204ENST00000366896 GGA2Q9UJY4 613 aa16.09■□□□□ 0.17
PRKN-204ENST00000366896 BTNL10A8MVZ5 291 aa16.08■□□□□ 0.17
PRKN-204ENST00000366896 TRAF5O00463 557 aa16.08■□□□□ 0.17
PRKN-204ENST00000366896 PPP1R37O75864 691 aa16.08■□□□□ 0.17
PRKN-204ENST00000366896 GUCY1A3Q02108 690 aa16.08■□□□□ 0.17
PRKN-204ENST00000366896 PTGISQ16647 500 aa16.08■□□□□ 0.17
PRKN-204ENST00000366896 CCDC40Q4G0X9 1142 aa16.08■□□□□ 0.17
PRKN-204ENST00000366896 FAM83BQ5T0W9 1011 aa16.08■□□□□ 0.17
PRKN-204ENST00000366896 CUL5Q93034 780 aa16.08■□□□□ 0.17
PRKN-204ENST00000366896 LSM14BQ9BX40 385 aaKnown RBP16.08■□□□□ 0.17
PRKN-204ENST00000366896 AIPL1Q9NZN9 384 aa16.08■□□□□ 0.17
PRKN-204ENST00000366896 PCDHA2Q9Y5H9 948 aa16.08■□□□□ 0.17
PRKN-204ENST00000366896 ATP8B3O60423 1300 aa16.08■□□□□ 0.16
PRKN-204ENST00000366896 SRRM3A6NNA2 597 aaPredicted RBP16.08■□□□□ 0.16
PRKN-204ENST00000366896 E9PMD0 336 aa16.08■□□□□ 0.16
PRKN-204ENST00000366896 CES2O00748 559 aa16.08■□□□□ 0.16
PRKN-204ENST00000366896 TBC1D12O60347 775 aa16.08■□□□□ 0.16
PRKN-204ENST00000366896 TTLL1O95922 423 aa16.08■□□□□ 0.16
PRKN-204ENST00000366896 CCDC172P0C7W6 258 aa16.08■□□□□ 0.16
PRKN-204ENST00000366896 NR1D1P20393 614 aa16.08■□□□□ 0.16
PRKN-204ENST00000366896 NAB2Q15742 525 aa16.08■□□□□ 0.16
PRKN-204ENST00000366896 EDRF1Q3B7T1 1238 aa16.08■□□□□ 0.16
PRKN-204ENST00000366896 CCDC65Q8IXS2 484 aa16.08■□□□□ 0.16
PRKN-204ENST00000366896 PIK3R5Q8WYR1 880 aa16.08■□□□□ 0.16
PRKN-204ENST00000366896 JPH2Q9BR39 696 aaPredicted RBP16.08■□□□□ 0.16
PRKN-204ENST00000366896 VCPKMTQ9H867 229 aa16.08■□□□□ 0.16
PRKN-204ENST00000366896 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.08■□□□□ 0.16
PRKN-204ENST00000366896 PCDHGC5Q9Y5F6 944 aa16.08■□□□□ 0.16
PRKN-204ENST00000366896 GREB1LQ9C091 1923 aaPredicted RBP16.08■□□□□ 0.16
PRKN-204ENST00000366896 FRMD3A2A2Y4 597 aa16.07■□□□□ 0.16
PRKN-204ENST00000366896 GLI1P08151 1106 aa16.07■□□□□ 0.16
PRKN-204ENST00000366896 CARSP49589 748 aaKnown RBP16.07■□□□□ 0.16
PRKN-204ENST00000366896 MAP3K10Q02779 954 aa16.07■□□□□ 0.16
PRKN-204ENST00000366896 PAK2Q13177 524 aa16.07■□□□□ 0.16
PRKN-204ENST00000366896 PLCB4Q15147 1175 aa16.07■□□□□ 0.16
PRKN-204ENST00000366896 SLC18A3Q16572 532 aa16.07■□□□□ 0.16
PRKN-204ENST00000366896 ZC3H15Q8WU90 426 aaKnown RBP16.07■□□□□ 0.16
PRKN-204ENST00000366896 DONSONQ9NYP3 566 aa16.07■□□□□ 0.16
PRKN-204ENST00000366896 PPP2R3BQ9Y5P8 575 aa16.07■□□□□ 0.16
PRKN-204ENST00000366896 MYH7BA7E2Y1 1941 aa16.07■□□□□ 0.16
PRKN-204ENST00000366896 USP17L10C9JJH3 530 aa16.07■□□□□ 0.16
PRKN-204ENST00000366896 CHUKO15111 745 aa16.07■□□□□ 0.16
PRKN-204ENST00000366896 FAM153BP0C7A2 387 aa16.07■□□□□ 0.16
PRKN-204ENST00000366896 DNA2P51530 1060 aa16.07■□□□□ 0.16
PRKN-204ENST00000366896 POLR2FP61218 127 aaKnown RBP16.07■□□□□ 0.16
PRKN-204ENST00000366896 ACTN3Q08043 901 aaPredicted RBP16.07■□□□□ 0.16
PRKN-204ENST00000366896 FAM153CQ494X1 144 aa16.07■□□□□ 0.16
PRKN-204ENST00000366896 C10orf76Q5T2E6 689 aa16.07■□□□□ 0.16
PRKN-204ENST00000366896 MOXD1Q6UVY6 613 aa16.07■□□□□ 0.16
PRKN-204ENST00000366896 EIF1ADQ8N9N8 165 aaKnown RBP16.07■□□□□ 0.16
PRKN-204ENST00000366896 MYCBPAPQ8TBZ2 947 aa16.07■□□□□ 0.16
PRKN-204ENST00000366896 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.07■□□□□ 0.165e-7■■■■■ 41.5
PRKN-204ENST00000366896 DCPSQ96C86 337 aaKnown RBP16.07■□□□□ 0.16
PRKN-204ENST00000366896 FAM153AQ9UHL3 310 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms