RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 KCNQ3O43525 872 aa9.53□□□□□ -0.88
H3F3A-201ENST00000366813 SIGLEC6O43699 453 aa9.53□□□□□ -0.88
H3F3A-201ENST00000366813 NRDCO43847 1150 aa9.53□□□□□ -0.88
H3F3A-201ENST00000366813 ZYXQ15942 572 aaKnown RBP9.53□□□□□ -0.88
H3F3A-201ENST00000366813 MTHFSDQ2M296 383 aaKnown RBP9.53□□□□□ -0.88
H3F3A-201ENST00000366813 UNC5AQ6ZN44 842 aa9.53□□□□□ -0.88
H3F3A-201ENST00000366813 SH3TC2Q8TF17 1288 aa9.53□□□□□ -0.88
H3F3A-201ENST00000366813 FAM122AQ96E09 287 aa9.53□□□□□ -0.88
H3F3A-201ENST00000366813 DBNDD1Q9H9R9 158 aa9.53□□□□□ -0.88
H3F3A-201ENST00000366813 CHST7Q9NS84 486 aa9.53□□□□□ -0.88
H3F3A-201ENST00000366813 SIRT5Q9NXA8 310 aa9.53□□□□□ -0.88
H3F3A-201ENST00000366813 NR2E3Q9Y5X4 410 aa9.53□□□□□ -0.88
H3F3A-201ENST00000366813 NOTOA8MTQ0 251 aa9.52□□□□□ -0.89
H3F3A-201ENST00000366813 MEIS1O00470 390 aa9.52□□□□□ -0.89
H3F3A-201ENST00000366813 SRSF3P84103 164 aaKnown RBP9.52□□□□□ -0.89
H3F3A-201ENST00000366813 PPP2R5EQ16537 467 aa9.52□□□□□ -0.89
H3F3A-201ENST00000366813 ZNF385BQ569K4 471 aa9.52□□□□□ -0.89
H3F3A-201ENST00000366813 ZPBP2Q6X784 338 aa9.52□□□□□ -0.89
H3F3A-201ENST00000366813 HNRNPLLQ8WVV9 542 aaKnown RBP9.52□□□□□ -0.89
H3F3A-201ENST00000366813 NYXQ9GZU5 481 aa9.52□□□□□ -0.89
H3F3A-201ENST00000366813 CRTAC1Q9NQ79 661 aa9.52□□□□□ -0.89
H3F3A-201ENST00000366813 ACTR10Q9NZ32 417 aa9.52□□□□□ -0.89
H3F3A-201ENST00000366813 TMEM82A0PJX8 343 aa9.51□□□□□ -0.89
H3F3A-201ENST00000366813 RPS12P25398 132 aaKnown RBP9.51□□□□□ -0.89
H3F3A-201ENST00000366813 RTP1P59025 263 aa9.51□□□□□ -0.89
H3F3A-201ENST00000366813 SP3Q02447 781 aa9.51□□□□□ -0.89
H3F3A-201ENST00000366813 CRHR2Q13324 411 aa9.51□□□□□ -0.89
H3F3A-201ENST00000366813 TCIRG1Q13488 830 aa9.51□□□□□ -0.89
H3F3A-201ENST00000366813 PRKG1Q13976 671 aa9.51□□□□□ -0.89
H3F3A-201ENST00000366813 TTLL10Q6ZVT0 673 aa9.51□□□□□ -0.89
H3F3A-201ENST00000366813 HTATIP2Q9BUP3 242 aa9.51□□□□□ -0.89
H3F3A-201ENST00000366813 TNFRSF10DQ9UBN6 386 aa9.51□□□□□ -0.89
H3F3A-201ENST00000366813 MINPP1Q9UNW1 487 aa9.51□□□□□ -0.89
H3F3A-201ENST00000366813 PCDHB12Q9Y5F1 795 aa9.51□□□□□ -0.89
H3F3A-201ENST00000366813 SLC12A7Q9Y666 1083 aa9.51□□□□□ -0.89
H3F3A-201ENST00000366813 EYSQ5T1H1 3165 aa9.51□□□□□ -0.89
H3F3A-201ENST00000366813 RTL9Q8NET4 1388 aa9.5□□□□□ -0.89
H3F3A-201ENST00000366813 ABCC4O15439 1325 aa9.5□□□□□ -0.89
H3F3A-201ENST00000366813 PRUNE2Q8WUY3 3088 aa9.5□□□□□ -0.89
H3F3A-201ENST00000366813 HMOX1P09601 288 aa9.5□□□□□ -0.89
H3F3A-201ENST00000366813 GPTP24298 496 aa9.5□□□□□ -0.89
H3F3A-201ENST00000366813 SUSD4Q5VX71 490 aa9.5□□□□□ -0.89
H3F3A-201ENST00000366813 SP8Q8IXZ3 490 aa9.5□□□□□ -0.89
H3F3A-201ENST00000366813 TMEM192Q8IY95 271 aa9.5□□□□□ -0.89
H3F3A-201ENST00000366813 SLC6A18Q96N87 628 aa9.5□□□□□ -0.89
H3F3A-201ENST00000366813 R3HCC1Q9Y3T6 440 aaKnown RBP9.5□□□□□ -0.89
H3F3A-201ENST00000366813 KCTD3Q9Y597 815 aa9.5□□□□□ -0.89
H3F3A-201ENST00000366813 MUC3AQ02505 3323 aa9.49□□□□□ -0.89
H3F3A-201ENST00000366813 FAM86C2PA6NEL3 165 aa9.49□□□□□ -0.89
H3F3A-201ENST00000366813 RFXAPO00287 272 aa9.49□□□□□ -0.89
H3F3A-201ENST00000366813 INHBBP09529 407 aa9.49□□□□□ -0.89
H3F3A-201ENST00000366813 PNLIPP16233 465 aa9.49□□□□□ -0.89
H3F3A-201ENST00000366813 ENDOUP21128 410 aaKnown RBP9.49□□□□□ -0.89
H3F3A-201ENST00000366813 IL13P35225 146 aa9.49□□□□□ -0.89
H3F3A-201ENST00000366813 TEFQ10587 303 aa9.49□□□□□ -0.89
H3F3A-201ENST00000366813 RAB33AQ14088 237 aa9.49□□□□□ -0.89
H3F3A-201ENST00000366813 BBS9Q3SYG4 887 aa9.49□□□□□ -0.89
H3F3A-201ENST00000366813 UBE2Q1Q7Z7E8 422 aa9.49□□□□□ -0.89
H3F3A-201ENST00000366813 IL17REQ8NFR9 667 aa9.49□□□□□ -0.89
H3F3A-201ENST00000366813 DHRS1Q96LJ7 313 aa9.49□□□□□ -0.89
H3F3A-201ENST00000366813 GFOD1Q9NXC2 390 aa9.49□□□□□ -0.89
H3F3A-201ENST00000366813 MANSC4A6NHS7 340 aaPredicted RBP9.48□□□□□ -0.89
H3F3A-201ENST00000366813 INHBEP58166 350 aa9.48□□□□□ -0.89
H3F3A-201ENST00000366813 GALNT18Q6P9A2 607 aa9.48□□□□□ -0.89
H3F3A-201ENST00000366813 NGEFQ8N5V2 710 aa9.48□□□□□ -0.89
H3F3A-201ENST00000366813 FCRL2Q96LA5 508 aaPredicted RBP9.48□□□□□ -0.89
H3F3A-201ENST00000366813 CDADC1Q9BWV3 514 aa9.48□□□□□ -0.89
H3F3A-201ENST00000366813 GCM1Q9NP62 436 aa9.48□□□□□ -0.89
H3F3A-201ENST00000366813 FZD1Q9UP38 647 aa9.48□□□□□ -0.89
H3F3A-201ENST00000366813 UBN2Q6ZU65 1347 aa9.47□□□□□ -0.89
H3F3A-201ENST00000366813 RPTORQ8N122 1335 aa9.47□□□□□ -0.89
H3F3A-201ENST00000366813 LAMB4A4D0S4 1761 aa9.47□□□□□ -0.89
H3F3A-201ENST00000366813 ECE2O60344 883 aa9.47□□□□□ -0.89
H3F3A-201ENST00000366813 BBOX1O75936 387 aa9.47□□□□□ -0.89
H3F3A-201ENST00000366813 ARL4AP40617 200 aa9.47□□□□□ -0.89
H3F3A-201ENST00000366813 AUHQ13825 339 aaKnown RBP9.47□□□□□ -0.89
H3F3A-201ENST00000366813 TCERG1LQ5VWI1 586 aa9.47□□□□□ -0.89
H3F3A-201ENST00000366813 OLFML2BQ68BL8 750 aa9.47□□□□□ -0.89
H3F3A-201ENST00000366813 CELF2-AS1Q8N7Q2 184 aa9.47□□□□□ -0.89
H3F3A-201ENST00000366813 PHAXQ9H814 394 aaKnown RBP9.47□□□□□ -0.89
H3F3A-201ENST00000366813 TAF6LQ9Y6J9 622 aa9.47□□□□□ -0.89
H3F3A-201ENST00000366813 NTSR2O95665 410 aa9.46□□□□□ -0.9
H3F3A-201ENST00000366813 VIL1P09327 827 aaKnown RBP9.46□□□□□ -0.9
H3F3A-201ENST00000366813 BMP7P18075 431 aa9.46□□□□□ -0.9
H3F3A-201ENST00000366813 SDHBP21912 280 aa9.46□□□□□ -0.9
H3F3A-201ENST00000366813 ZNF280AP59817 542 aaPredicted RBP9.46□□□□□ -0.9
H3F3A-201ENST00000366813 SERINC3Q13530 473 aa9.46□□□□□ -0.9
H3F3A-201ENST00000366813 LARP1BQ659C4 914 aaKnown RBP9.46□□□□□ -0.9
H3F3A-201ENST00000366813 ARMC9Q7Z3E5 817 aa9.46□□□□□ -0.9
H3F3A-201ENST00000366813 GUCD1Q96NT3 240 aa9.46□□□□□ -0.9
H3F3A-201ENST00000366813 DSCC1Q9BVC3 393 aa9.46□□□□□ -0.9
H3F3A-201ENST00000366813 TRIM55Q9BYV6 548 aa9.46□□□□□ -0.9
H3F3A-201ENST00000366813 LNPKQ9C0E8 428 aa9.46□□□□□ -0.9
H3F3A-201ENST00000366813 ZCCHC4Q9H5U6 513 aa9.46□□□□□ -0.9
H3F3A-201ENST00000366813 SUCOQ9UBS9 1254 aaKnown RBP9.46□□□□□ -0.9
H3F3A-201ENST00000366813 ZNF214Q9UL59 606 aaPredicted RBP9.46□□□□□ -0.9
H3F3A-201ENST00000366813 IRAK3Q9Y616 596 aa9.46□□□□□ -0.9
H3F3A-201ENST00000366813 HRKO00198 91 aa9.45□□□□□ -0.9
H3F3A-201ENST00000366813 ABLIM1O14639 778 aa9.45□□□□□ -0.9
H3F3A-201ENST00000366813 EFEMP2O95967 443 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms