RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 INO80BQ9C086 356 aaPredicted RBP3.82□□□□□ -1.8
RNU6-238P-201ENST00000363313 SRPK3Q9UPE1 567 aa3.82□□□□□ -1.8
RNU6-238P-201ENST00000363313 IQCA1LA6NCM1 817 aa3.81□□□□□ -1.8
RNU6-238P-201ENST00000363313 KRTAP29-1A8MX34 341 aaPredicted RBP3.81□□□□□ -1.8
RNU6-238P-201ENST00000363313 AOAHP28039 575 aa3.81□□□□□ -1.8
RNU6-238P-201ENST00000363313 GRIA2P42262 883 aa3.81□□□□□ -1.8
RNU6-238P-201ENST00000363313 ECE1P42892 770 aa3.81□□□□□ -1.8
RNU6-238P-201ENST00000363313 MAN2A2P49641 1150 aa3.81□□□□□ -1.8
RNU6-238P-201ENST00000363313 C21orf58P58505 322 aa3.81□□□□□ -1.8
RNU6-238P-201ENST00000363313 TOB2Q14106 344 aaPredicted RBP3.81□□□□□ -1.8
RNU6-238P-201ENST00000363313 SLC10A6Q3KNW5 377 aa3.81□□□□□ -1.8
RNU6-238P-201ENST00000363313 KANK2Q63ZY3 851 aa3.81□□□□□ -1.8
RNU6-238P-201ENST00000363313 HTR3DQ70Z44 454 aa3.81□□□□□ -1.8
RNU6-238P-201ENST00000363313 OTOP2Q7RTS6 562 aa3.81□□□□□ -1.8
RNU6-238P-201ENST00000363313 FILIP1Q7Z7B0 1213 aa3.81□□□□□ -1.8
RNU6-238P-201ENST00000363313 TGIF2Q9GZN2 237 aa3.81□□□□□ -1.8
RNU6-238P-201ENST00000363313 KIAA1683Q9H0B3 1180 aa3.81□□□□□ -1.8
RNU6-238P-201ENST00000363313 RIOX1Q9H6W3 641 aa3.81□□□□□ -1.8
RNU6-238P-201ENST00000363313 AGO3Q9H9G7 860 aaKnown RBP3.81□□□□□ -1.8
RNU6-238P-201ENST00000363313 ADARB2Q9NS39 739 aaKnown RBP3.81□□□□□ -1.8
RNU6-238P-201ENST00000363313 PRKAG3Q9UGI9 489 aa3.81□□□□□ -1.8
RNU6-238P-201ENST00000363313 ATP23Q9Y6H3 246 aa3.81□□□□□ -1.8
RNU6-238P-201ENST00000363313 XDHP47989 1333 aa3.8□□□□□ -1.8
RNU6-238P-201ENST00000363313 FAM90A27PA6NNH2 459 aa3.8□□□□□ -1.8
RNU6-238P-201ENST00000363313 ZAR1LA6NP61 321 aa3.8□□□□□ -1.8
RNU6-238P-201ENST00000363313 RECKO95980 971 aa3.8□□□□□ -1.8
RNU6-238P-201ENST00000363313 CDK4P11802 303 aa3.8□□□□□ -1.8
RNU6-238P-201ENST00000363313 PDE6AP16499 860 aa3.8□□□□□ -1.8
RNU6-238P-201ENST00000363313 NAT1P18440 290 aa3.8□□□□□ -1.8
RNU6-238P-201ENST00000363313 ATF4P18848 351 aaPredicted RBP3.8□□□□□ -1.8
RNU6-238P-201ENST00000363313 SMAD3P84022 425 aaKnown RBP3.8□□□□□ -1.8
RNU6-238P-201ENST00000363313 RIN1Q13671 783 aa3.8□□□□□ -1.8
RNU6-238P-201ENST00000363313 FIGNQ5HY92 759 aa3.8□□□□□ -1.8
RNU6-238P-201ENST00000363313 MBNL2Q5VZF2 373 aaKnown RBP3.8□□□□□ -1.8
RNU6-238P-201ENST00000363313 LARP1BQ659C4 914 aaKnown RBP3.8□□□□□ -1.8
RNU6-238P-201ENST00000363313 MRM1Q6IN84 353 aaKnown RBP3.8□□□□□ -1.8
RNU6-238P-201ENST00000363313 NT5DC4Q86YG4 428 aa3.8□□□□□ -1.8
RNU6-238P-201ENST00000363313 THAP3Q8WTV1 239 aaPredicted RBP3.8□□□□□ -1.8
RNU6-238P-201ENST00000363313 SLC25A43Q8WUT9 341 aaPredicted RBP3.8□□□□□ -1.8
RNU6-238P-201ENST00000363313 OR10A5Q9H207 317 aa3.8□□□□□ -1.8
RNU6-238P-201ENST00000363313 TOR3AQ9H497 397 aa3.8□□□□□ -1.8
RNU6-238P-201ENST00000363313 NRDE2Q9H7Z3 1164 aa3.8□□□□□ -1.8
RNU6-238P-201ENST00000363313 RIC8BQ9NVN3 520 aa3.8□□□□□ -1.8
RNU6-238P-201ENST00000363313 BTBD7Q9P203 1132 aa3.8□□□□□ -1.8
RNU6-238P-201ENST00000363313 FZD1Q9UP38 647 aa3.8□□□□□ -1.8
RNU6-238P-201ENST00000363313 SH3BP1Q9Y3L3 701 aa3.8□□□□□ -1.8
RNU6-238P-201ENST00000363313 CTDP1Q9Y5B0 961 aaPredicted RBP3.8□□□□□ -1.8
RNU6-238P-201ENST00000363313 TCRBV5S4A2TA0A5A2 114 aa3.79□□□□□ -1.8
RNU6-238P-201ENST00000363313 MASP2O00187 686 aa3.79□□□□□ -1.8
RNU6-238P-201ENST00000363313 GSTA4O15217 222 aa3.79□□□□□ -1.8
RNU6-238P-201ENST00000363313 CLASP2O75122 1294 aaKnown RBP3.79□□□□□ -1.8
RNU6-238P-201ENST00000363313 SCNN1GP51170 649 aa3.79□□□□□ -1.8
RNU6-238P-201ENST00000363313 COLEC12Q5KU26 742 aa3.79□□□□□ -1.8
RNU6-238P-201ENST00000363313 LY6G5CQ5SRR4 150 aa3.79□□□□□ -1.8
RNU6-238P-201ENST00000363313 ZKSCAN2Q63HK3 967 aa3.79□□□□□ -1.8
RNU6-238P-201ENST00000363313 GRAMD4Q6IC98 578 aa3.79□□□□□ -1.8
RNU6-238P-201ENST00000363313 ARHGAP36Q6ZRI8 547 aa3.79□□□□□ -1.8
RNU6-238P-201ENST00000363313 EP400NLQ6ZTU2 488 aa3.79□□□□□ -1.8
RNU6-238P-201ENST00000363313 MAMDC2Q7Z304 686 aaPredicted RBP3.79□□□□□ -1.8
RNU6-238P-201ENST00000363313 VPS37DQ86XT2 251 aa3.79□□□□□ -1.8
RNU6-238P-201ENST00000363313 SYNE4Q8N205 404 aa3.79□□□□□ -1.8
RNU6-238P-201ENST00000363313 AARSD1Q9BTE6 412 aaKnown RBP3.79□□□□□ -1.8
RNU6-238P-201ENST00000363313 CD244Q9BZW8 370 aa3.79□□□□□ -1.8
RNU6-238P-201ENST00000363313 SLC6A15Q9H2J7 730 aa3.79□□□□□ -1.8
RNU6-238P-201ENST00000363313 IPPKQ9H8X2 491 aa3.79□□□□□ -1.8
RNU6-238P-201ENST00000363313 ZNHIT2Q9UHR6 403 aa3.79□□□□□ -1.8
RNU6-238P-201ENST00000363313 INPP5FQ9Y2H2 1132 aa3.79□□□□□ -1.8
RNU6-238P-201ENST00000363313 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.78□□□□□ -1.8
RNU6-238P-201ENST00000363313 A0A1W2PRX2 142 aa3.78□□□□□ -1.8
RNU6-238P-201ENST00000363313 GOLGA6L6A8MZA4 724 aa3.78□□□□□ -1.8
RNU6-238P-201ENST00000363313 ITGB6P18564 788 aa3.78□□□□□ -1.8
RNU6-238P-201ENST00000363313 ADCY7P51828 1080 aa3.78□□□□□ -1.8
RNU6-238P-201ENST00000363313 FSTL1Q12841 308 aa3.78□□□□□ -1.8
RNU6-238P-201ENST00000363313 MAP3K12Q12852 859 aa3.78□□□□□ -1.8
RNU6-238P-201ENST00000363313 PAK1Q13153 545 aa3.78□□□□□ -1.8
RNU6-238P-201ENST00000363313 MOGSQ13724 837 aa3.78□□□□□ -1.8
RNU6-238P-201ENST00000363313 PTPAQ15257 358 aa3.78□□□□□ -1.8
RNU6-238P-201ENST00000363313 RABL3Q5HYI8 236 aa3.78□□□□□ -1.8
RNU6-238P-201ENST00000363313 STRIP1Q5VSL9 837 aa3.78□□□□□ -1.8
RNU6-238P-201ENST00000363313 MFSD5Q6N075 450 aa3.78□□□□□ -1.8
RNU6-238P-201ENST00000363313 KCNT2Q6UVM3 1135 aa3.78□□□□□ -1.8
RNU6-238P-201ENST00000363313 C16orf59Q7L2K0 433 aa3.78□□□□□ -1.8
RNU6-238P-201ENST00000363313 OR14K1Q8NGZ2 314 aa3.78□□□□□ -1.8
RNU6-238P-201ENST00000363313 NTN5Q8WTR8 489 aaPredicted RBP3.78□□□□□ -1.8
RNU6-238P-201ENST00000363313 GFM2Q969S9 779 aaKnown RBP3.78□□□□□ -1.8
RNU6-238P-201ENST00000363313 TRPS1Q9UHF7 1281 aa3.78□□□□□ -1.8
RNU6-238P-201ENST00000363313 COX11Q9Y6N1 276 aa3.78□□□□□ -1.8
RNU6-238P-201ENST00000363313 COL4A3Q01955 1670 aa3.78□□□□□ -1.81
RNU6-238P-201ENST00000363313 B2RBV5 119 aa3.77□□□□□ -1.81
RNU6-238P-201ENST00000363313 AQP7O14520 342 aa3.77□□□□□ -1.81
RNU6-238P-201ENST00000363313 H2AFYO75367 372 aaKnown RBP3.77□□□□□ -1.81
RNU6-238P-201ENST00000363313 MPIG6BO95866 241 aa3.77□□□□□ -1.81
RNU6-238P-201ENST00000363313 C4BPAP04003 597 aaKnown RBP3.77□□□□□ -1.81
RNU6-238P-201ENST00000363313 ITGB1P05556 798 aa3.77□□□□□ -1.81
RNU6-238P-201ENST00000363313 PABPC1P11940 636 aaKnown RBP3.77□□□□□ -1.81
RNU6-238P-201ENST00000363313 ADCY8P40145 1251 aa3.77□□□□□ -1.81
RNU6-238P-201ENST00000363313 ST5P78524 1137 aa3.77□□□□□ -1.81
RNU6-238P-201ENST00000363313 CD83Q01151 205 aa3.77□□□□□ -1.81
RNU6-238P-201ENST00000363313 IFRD2Q12894 506 aaPredicted RBP3.77□□□□□ -1.81
RNU6-238P-201ENST00000363313 NTRK3Q16288 839 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms