RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 MAP4K4O95819 1239 aaPredicted RBP4.93□□□□□ -1.62
RNU6-28P-201ENST00000362378 PF4V1P10720 104 aa4.93□□□□□ -1.62
RNU6-28P-201ENST00000362378 CYP2C19P33261 490 aa4.93□□□□□ -1.62
RNU6-28P-201ENST00000362378 YBX1P67809 324 aaKnown RBP4.93□□□□□ -1.62
RNU6-28P-201ENST00000362378 TMEM62Q0P6H9 643 aa4.93□□□□□ -1.62
RNU6-28P-201ENST00000362378 RAB3GAP1Q15042 981 aa4.93□□□□□ -1.62
RNU6-28P-201ENST00000362378 GFOD2Q3B7J2 385 aa4.93□□□□□ -1.62
RNU6-28P-201ENST00000362378 PLEKHN1Q494U1 663 aaPredicted RBP4.93□□□□□ -1.62
RNU6-28P-201ENST00000362378 TTC38Q5R3I4 469 aa4.93□□□□□ -1.62
RNU6-28P-201ENST00000362378 TIGD7Q6NT04 549 aaPredicted RBP4.93□□□□□ -1.62
RNU6-28P-201ENST00000362378 TTLL7Q6ZT98 887 aa4.93□□□□□ -1.62
RNU6-28P-201ENST00000362378 KANSL1Q7Z3B3 1105 aa4.93□□□□□ -1.62
RNU6-28P-201ENST00000362378 KCNK18Q7Z418 384 aa4.93□□□□□ -1.62
RNU6-28P-201ENST00000362378 CCAR1Q8IX12 1150 aaKnown RBP4.93□□□□□ -1.62
RNU6-28P-201ENST00000362378 CCDC146Q8IYE0 955 aa4.93□□□□□ -1.62
RNU6-28P-201ENST00000362378 C7orf31Q8N865 590 aa4.93□□□□□ -1.62
RNU6-28P-201ENST00000362378 TOE1Q96GM8 510 aaKnown RBP4.93□□□□□ -1.62
RNU6-28P-201ENST00000362378 KIRREL1Q96J84 757 aa4.93□□□□□ -1.62
RNU6-28P-201ENST00000362378 FOXB1Q99853 325 aa4.93□□□□□ -1.62
RNU6-28P-201ENST00000362378 SLC6A17Q9H1V8 727 aa4.93□□□□□ -1.62
RNU6-28P-201ENST00000362378 PRSS38A1L453 326 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 PRAMEF22A3QJZ6 481 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 OR14I1A6ND48 311 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 HRKO00198 91 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 ABLIM1O14639 778 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 XPOTO43592 962 aaKnown RBP4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 PRPF6O94906 941 aaKnown RBP4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 ZRANB2O95218 330 aaKnown RBP eCLIP4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 MPIG6BO95866 241 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 PRLP01236 227 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 CT47B1P0C2W7 299 aaPredicted RBP4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 AGXTP21549 392 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 SDHBP21912 280 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 MRPS9P82933 396 aaKnown RBP4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 HTRA3P83110 453 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 ALDH6A1Q02252 535 aaKnown RBP4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 GTF2H3Q13889 308 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 LRP8Q14114 963 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 UGT8Q16880 541 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 CT83Q5H943 113 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 ZBTB41Q5SVQ8 909 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 ADGRF1Q5T601 910 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 EFCAB2Q5VUJ9 269 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 PRAMEF18Q5VWM3 479 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 FYB2Q5VWT5 728 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 CD276Q5ZPR3 534 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 ZC3H14Q6PJT7 736 aaKnown RBP4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 TEPPQ6URK8 271 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 AMIGO3Q86WK7 504 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 PROSER1Q86XN7 944 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 TPH2Q8IWU9 490 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 HIPK4Q8NE63 616 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 TGFBRAP1Q8WUH2 860 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 JADE3Q92613 823 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 HSPBAP1Q96EW2 488 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 RAX2Q96IS3 184 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 TEKT5Q96M29 485 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 AIFM3Q96NN9 605 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 ANO3Q9BYT9 981 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 POFUT1Q9H488 388 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 NGRNQ9NPE2 291 aaKnown RBP4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 DNAJC28Q9NX36 388 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 INVSQ9Y283 1065 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 PPP2R3BQ9Y5P8 575 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 GPR45Q9Y5Y3 372 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 HCFC2Q9Y5Z7 792 aa4.92□□□□□ -1.62
RNU6-28P-201ENST00000362378 NFIBO00712 420 aa4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 HYAL3O43820 417 aaPredicted RBP4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 ENO2P09104 434 aaPredicted RBP4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 MTHFD2P13995 350 aa4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 LPOP22079 712 aaPredicted RBP4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 PTGS1P23219 599 aa4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 AKAP5P24588 427 aa4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 THBS2P35442 1172 aa4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 SRSF2Q01130 221 aaKnown RBP4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 ROM1Q03395 351 aa4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 TCIRG1Q13488 830 aa4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 MYBPC3Q14896 1274 aa4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 CLUL1Q15846 466 aa4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 CR1LQ2VPA4 569 aa4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 MINDY4Q4G0A6 757 aa4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 PITRM1Q5JRX3 1037 aa4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 TOR2AQ5JU69 321 aa4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 KRTAP5-3Q6L8H2 238 aa4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 KIAA1841Q6NSI8 718 aa4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 ETV3LQ6ZN32 361 aa4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 CBLL1Q75N03 491 aa4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 ATG4DQ86TL0 474 aaPredicted RBP4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 IRF2BP1Q8IU81 584 aa4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 ABI1Q8IZP0 508 aa4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 RSAD2Q8WXG1 361 aa4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 CPA5Q8WXQ8 436 aa4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 ERCC4Q92889 916 aaPredicted RBP4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 EAF2Q96CJ1 260 aaPredicted RBP4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 TUBGCP5Q96RT8 1024 aa4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 MYL10Q9BUA6 226 aa4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 TMPRSS11EQ9UL52 423 aa4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 NUMBLQ9Y6R0 609 aa4.91□□□□□ -1.62
RNU6-28P-201ENST00000362378 ZNF839A8K0R7 811 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms