RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 GOLGA6L3A6NEY3 463 aa24.31■■□□□ 1.48
HOXA4-201ENST00000360046 ATP4AP20648 1035 aa24.31■■□□□ 1.48
HOXA4-201ENST00000360046 NPEPPSP55786 919 aa24.31■■□□□ 1.48
HOXA4-201ENST00000360046 C1orf186Q6ZWK4 172 aa24.31■■□□□ 1.48
HOXA4-201ENST00000360046 SLAIN1Q8ND83 568 aa24.31■■□□□ 1.48
HOXA4-201ENST00000360046 ZHX3Q9H4I2 956 aa24.31■■□□□ 1.48
HOXA4-201ENST00000360046 PANK4Q9NVE7 773 aa24.31■■□□□ 1.48
HOXA4-201ENST00000360046 KCND2Q9NZV8 630 aa24.31■■□□□ 1.48
HOXA4-201ENST00000360046 USO1O60763 962 aaKnown RBP24.3■■□□□ 1.48
HOXA4-201ENST00000360046 RHOBTB3O94955 611 aa24.3■■□□□ 1.48
HOXA4-201ENST00000360046 STBD1O95210 358 aa24.3■■□□□ 1.48
HOXA4-201ENST00000360046 HSPA8P11142 646 aaKnown RBP24.3■■□□□ 1.48
HOXA4-201ENST00000360046 MARK3P27448 753 aa24.3■■□□□ 1.48
HOXA4-201ENST00000360046 GRK4P32298 578 aa24.3■■□□□ 1.48
HOXA4-201ENST00000360046 GIT2Q14161 759 aa24.3■■□□□ 1.48
HOXA4-201ENST00000360046 CCDC65Q8IXS2 484 aa24.3■■□□□ 1.48
HOXA4-201ENST00000360046 CEP170P1Q96L14 293 aa24.3■■□□□ 1.48
HOXA4-201ENST00000360046 NAT10Q9H0A0 1025 aaKnown RBP24.3■■□□□ 1.48
HOXA4-201ENST00000360046 SMARCAD1Q9H4L7 1026 aa24.3■■□□□ 1.48
HOXA4-201ENST00000360046 TBCAO75347 108 aaKnown RBP24.3■■□□□ 1.48
HOXA4-201ENST00000360046 HSPA1AP0DMV8 641 aaKnown RBP24.3■■□□□ 1.48
HOXA4-201ENST00000360046 HSPA1BP0DMV9 641 aaKnown RBP24.3■■□□□ 1.48
HOXA4-201ENST00000360046 CCND3P30281 292 aaPredicted RBP24.3■■□□□ 1.48
HOXA4-201ENST00000360046 ZNF658Q5TYW1 1059 aaPredicted RBP24.3■■□□□ 1.48
HOXA4-201ENST00000360046 PLPPR4Q7Z2D5 763 aa24.3■■□□□ 1.48
HOXA4-201ENST00000360046 SMYD4Q8IYR2 804 aaPredicted RBP24.3■■□□□ 1.48
HOXA4-201ENST00000360046 RBSNQ9H1K0 784 aa24.3■■□□□ 1.48
HOXA4-201ENST00000360046 LGALS2P05162 132 aa24.29■■□□□ 1.48
HOXA4-201ENST00000360046 MMP3P08254 477 aa24.29■■□□□ 1.48
HOXA4-201ENST00000360046 ZNF165P49910 485 aa24.29■■□□□ 1.48
HOXA4-201ENST00000360046 COASYQ13057 564 aa24.29■■□□□ 1.48
HOXA4-201ENST00000360046 MTERF2Q49AM1 385 aa24.29■■□□□ 1.48
HOXA4-201ENST00000360046 MLKLQ8NB16 471 aa24.29■■□□□ 1.48
HOXA4-201ENST00000360046 FAM167AQ96KS9 214 aa24.29■■□□□ 1.48
HOXA4-201ENST00000360046 AP5M1Q9H0R1 490 aa24.29■■□□□ 1.48
HOXA4-201ENST00000360046 NRBP2Q9NSY0 501 aa24.29■■□□□ 1.48
HOXA4-201ENST00000360046 DACH1Q9UI36 760 aa24.29■■□□□ 1.48
HOXA4-201ENST00000360046 PTPN22Q9Y2R2 807 aa24.29■■□□□ 1.48
HOXA4-201ENST00000360046 GDAQ9Y2T3 454 aa24.29■■□□□ 1.48
HOXA4-201ENST00000360046 PPFIA4O75335 1185 aa24.28■■□□□ 1.48
HOXA4-201ENST00000360046 CAVIN2O95810 425 aa24.28■■□□□ 1.48
HOXA4-201ENST00000360046 INHAP05111 366 aa24.28■■□□□ 1.48
HOXA4-201ENST00000360046 ZNF286BP0CG31 522 aa24.28■■□□□ 1.48
HOXA4-201ENST00000360046 LBX1P52954 281 aa24.28■■□□□ 1.48
HOXA4-201ENST00000360046 FAM200AQ8TCP9 573 aa24.28■■□□□ 1.48
HOXA4-201ENST00000360046 POLD4Q9HCU8 107 aa24.28■■□□□ 1.48
HOXA4-201ENST00000360046 CYP26B1Q9NR63 512 aa24.28■■□□□ 1.48
HOXA4-201ENST00000360046 MYH11P35749 1972 aa24.27■■□□□ 1.48
HOXA4-201ENST00000360046 RSPH10B2B2RC85 870 aa24.27■■□□□ 1.48
HOXA4-201ENST00000360046 SEPT4O43236 478 aa24.27■■□□□ 1.48
HOXA4-201ENST00000360046 RSPH10BP0C881 870 aa24.27■■□□□ 1.48
HOXA4-201ENST00000360046 SLC26A2P50443 739 aa24.27■■□□□ 1.48
HOXA4-201ENST00000360046 DGKDQ16760 1214 aa24.27■■□□□ 1.48
HOXA4-201ENST00000360046 HERC4Q5GLZ8 1057 aaPredicted RBP24.27■■□□□ 1.48
HOXA4-201ENST00000360046 HPS3Q969F9 1004 aa24.27■■□□□ 1.48
HOXA4-201ENST00000360046 FAM13AO94988 1023 aa24.27■■□□□ 1.48
HOXA4-201ENST00000360046 GUCY2CP25092 1073 aa24.27■■□□□ 1.48
HOXA4-201ENST00000360046 MAEAQ7L5Y9 396 aa24.27■■□□□ 1.48
HOXA4-201ENST00000360046 ERAP1Q9NZ08 941 aa24.27■■□□□ 1.48
HOXA4-201ENST00000360046 TRPC6Q9Y210 931 aa24.27■■□□□ 1.48
HOXA4-201ENST00000360046 Q9Y3F1 56 aa24.27■■□□□ 1.48
HOXA4-201ENST00000360046 CTCFP49711 727 aaPredicted RBP24.26■■□□□ 1.47
HOXA4-201ENST00000360046 PLCB4Q15147 1175 aa24.26■■□□□ 1.47
HOXA4-201ENST00000360046 BRDTQ58F21 947 aaPredicted RBP24.26■■□□□ 1.47
HOXA4-201ENST00000360046 SH3TC2Q8TF17 1288 aa24.26■■□□□ 1.47
HOXA4-201ENST00000360046 BBXQ8WY36 941 aaPredicted RBP24.26■■□□□ 1.47
HOXA4-201ENST00000360046 NIFKQ9BYG3 293 aaKnown RBP24.26■■□□□ 1.47
HOXA4-201ENST00000360046 CBX8Q9HC52 389 aa24.26■■□□□ 1.47
HOXA4-201ENST00000360046 SLC39A2Q9NP94 309 aa24.26■■□□□ 1.47
HOXA4-201ENST00000360046 ODF2LQ9ULJ1 636 aa24.26■■□□□ 1.47
HOXA4-201ENST00000360046 COL4A3BPQ9Y5P4 624 aa24.26■■□□□ 1.47
HOXA4-201ENST00000360046 FSD2A1L4K1 749 aa24.25■■□□□ 1.47
HOXA4-201ENST00000360046 FRMD3A2A2Y4 597 aa24.25■■□□□ 1.47
HOXA4-201ENST00000360046 A6NJR5 290 aa24.25■■□□□ 1.47
HOXA4-201ENST00000360046 HIP1RO75146 1068 aa24.25■■□□□ 1.47
HOXA4-201ENST00000360046 DUSP11O75319 330 aaKnown RBP24.25■■□□□ 1.47
HOXA4-201ENST00000360046 RARBP10826 455 aa24.25■■□□□ 1.47
HOXA4-201ENST00000360046 CPT1AP50416 773 aa24.25■■□□□ 1.47
HOXA4-201ENST00000360046 STK4Q13043 487 aa24.25■■□□□ 1.47
HOXA4-201ENST00000360046 ATP8B4Q8TF62 1192 aa24.25■■□□□ 1.47
HOXA4-201ENST00000360046 GTPBP4Q9BZE4 634 aaKnown RBP24.25■■□□□ 1.47
HOXA4-201ENST00000360046 TBC1D7Q9P0N9 293 aa24.25■■□□□ 1.47
HOXA4-201ENST00000360046 ZNF215Q9UL58 517 aaPredicted RBP24.25■■□□□ 1.47
HOXA4-201ENST00000360046 MAPK8IP1Q9UQF2 711 aa24.25■■□□□ 1.47
HOXA4-201ENST00000360046 SFI1A8K8P3 1242 aa24.24■■□□□ 1.47
HOXA4-201ENST00000360046 HOXD8P13378 290 aaPredicted RBP24.24■■□□□ 1.47
HOXA4-201ENST00000360046 IRX5P78411 483 aaPredicted RBP24.24■■□□□ 1.47
HOXA4-201ENST00000360046 EHHADHQ08426 723 aa24.24■■□□□ 1.47
HOXA4-201ENST00000360046 PSMD2Q13200 908 aa24.24■■□□□ 1.47
HOXA4-201ENST00000360046 FAM26FQ5R3K3 315 aa24.24■■□□□ 1.47
HOXA4-201ENST00000360046 MAP3K21Q5TCX8 1036 aa24.24■■□□□ 1.47
HOXA4-201ENST00000360046 KLHL10Q6JEL2 608 aa24.24■■□□□ 1.47
HOXA4-201ENST00000360046 SFR1Q86XK3 245 aa24.24■■□□□ 1.47
HOXA4-201ENST00000360046 DGAT1O75907 488 aa24.24■■□□□ 1.47
HOXA4-201ENST00000360046 CD44P16070 742 aaKnown RBP24.24■■□□□ 1.47
HOXA4-201ENST00000360046 GAP43P17677 238 aa24.24■■□□□ 1.47
HOXA4-201ENST00000360046 POLGP54098 1239 aaPredicted RBP24.24■■□□□ 1.47
HOXA4-201ENST00000360046 LUZP1Q86V48 1076 aa24.24■■□□□ 1.47
HOXA4-201ENST00000360046 MYCT1Q8N699 235 aa24.24■■□□□ 1.47
HOXA4-201ENST00000360046 C16orf70Q9BSU1 422 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms