RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 CASKIN2Q8WXE0 1202 aa9.39□□□□□ -0.91
RFX3-202ENST00000358730 SLC35C1Q96A29 364 aa9.39□□□□□ -0.91
RFX3-202ENST00000358730 AJAP1Q9UKB5 411 aaPredicted RBP9.39□□□□□ -0.91
RFX3-202ENST00000358730 EML1O00423 815 aa9.39□□□□□ -0.91
RFX3-202ENST00000358730 CHMP2AO43633 222 aa9.39□□□□□ -0.91
RFX3-202ENST00000358730 ONECUT3O60422 494 aaPredicted RBP9.39□□□□□ -0.91
RFX3-202ENST00000358730 FAM13AO94988 1023 aa9.39□□□□□ -0.91
RFX3-202ENST00000358730 EYA4O95677 639 aa9.39□□□□□ -0.91
RFX3-202ENST00000358730 GH2P01242 217 aa9.39□□□□□ -0.91
RFX3-202ENST00000358730 CIITAP33076 1130 aa9.39□□□□□ -0.91
RFX3-202ENST00000358730 IRAK1P51617 712 aa9.39□□□□□ -0.91
RFX3-202ENST00000358730 GNGT1P63211 74 aa9.39□□□□□ -0.91
RFX3-202ENST00000358730 CFAP58Q5T655 872 aa9.39□□□□□ -0.91
RFX3-202ENST00000358730 GJB7Q6PEY0 223 aa9.39□□□□□ -0.91
RFX3-202ENST00000358730 VPS36Q86VN1 386 aa9.39□□□□□ -0.91
RFX3-202ENST00000358730 PIGOQ8TEQ8 1089 aa9.39□□□□□ -0.91
RFX3-202ENST00000358730 SLX4Q8IY92 1834 aa9.39□□□□□ -0.91
RFX3-202ENST00000358730 SFI1A8K8P3 1242 aa9.39□□□□□ -0.91
RFX3-202ENST00000358730 CEP104O60308 925 aa9.39□□□□□ -0.91
RFX3-202ENST00000358730 PDE6BP35913 854 aa9.39□□□□□ -0.91
RFX3-202ENST00000358730 PRKCIP41743 596 aa9.39□□□□□ -0.91
RFX3-202ENST00000358730 CTTNQ14247 550 aaKnown RBP9.39□□□□□ -0.91
RFX3-202ENST00000358730 KCTD16Q68DU8 428 aa9.39□□□□□ -0.91
RFX3-202ENST00000358730 TTC19Q6DKK2 380 aaPredicted RBP9.39□□□□□ -0.91
RFX3-202ENST00000358730 SLC30A10Q6XR72 485 aa9.39□□□□□ -0.91
RFX3-202ENST00000358730 SH2D3CQ8N5H7 860 aa9.39□□□□□ -0.91
RFX3-202ENST00000358730 ZNF622Q969S3 477 aaKnown RBP eCLIP9.39□□□□□ -0.91
RFX3-202ENST00000358730 POLR3CQ9BUI4 534 aaPredicted RBP9.39□□□□□ -0.91
RFX3-202ENST00000358730 RABEP2Q9H5N1 569 aa9.39□□□□□ -0.91
RFX3-202ENST00000358730 SIX2Q9NPC8 291 aa9.39□□□□□ -0.91
RFX3-202ENST00000358730 OLFML3Q9NRN5 406 aa9.39□□□□□ -0.91
RFX3-202ENST00000358730 ZMYM2Q9UBW7 1377 aa9.38□□□□□ -0.91
RFX3-202ENST00000358730 GRIN2DO15399 1336 aa9.38□□□□□ -0.91
RFX3-202ENST00000358730 TMCO5BA8MYB1 307 aa9.38□□□□□ -0.91
RFX3-202ENST00000358730 ANKRD65E5RJM6 399 aa9.38□□□□□ -0.91
RFX3-202ENST00000358730 CES2O00748 559 aa9.38□□□□□ -0.91
RFX3-202ENST00000358730 EIF3HO15372 352 aaKnown RBP eCLIP9.38□□□□□ -0.91
RFX3-202ENST00000358730 ECE2O60344 883 aa9.38□□□□□ -0.91
RFX3-202ENST00000358730 GAP43P17677 238 aa9.38□□□□□ -0.91
RFX3-202ENST00000358730 MMP14P50281 582 aa9.38□□□□□ -0.91
RFX3-202ENST00000358730 JAM2P57087 298 aa9.38□□□□□ -0.91
RFX3-202ENST00000358730 HLTFQ14527 1009 aaKnown RBP eCLIP9.38□□□□□ -0.91
RFX3-202ENST00000358730 DACT2Q5SW24 774 aa9.38□□□□□ -0.91
RFX3-202ENST00000358730 STRIP1Q5VSL9 837 aa9.38□□□□□ -0.91
RFX3-202ENST00000358730 RINT1Q6NUQ1 792 aa9.38□□□□□ -0.91
RFX3-202ENST00000358730 LRRC57Q8N9N7 239 aa9.38□□□□□ -0.91
RFX3-202ENST00000358730 MASTLQ96GX5 879 aa9.38□□□□□ -0.91
RFX3-202ENST00000358730 IKZF4Q9H2S9 585 aa9.38□□□□□ -0.91
RFX3-202ENST00000358730 TMEM51Q9NW97 253 aa9.38□□□□□ -0.91
RFX3-202ENST00000358730 TRPC5Q9UL62 973 aaPredicted RBP9.38□□□□□ -0.91
RFX3-202ENST00000358730 PPP1R12BO60237 982 aaPredicted RBP9.38□□□□□ -0.91
RFX3-202ENST00000358730 GFPT2O94808 682 aa9.38□□□□□ -0.91
RFX3-202ENST00000358730 NMT1P30419 496 aaKnown RBP9.38□□□□□ -0.91
RFX3-202ENST00000358730 CCT5P48643 541 aa9.38□□□□□ -0.91
RFX3-202ENST00000358730 JAG1P78504 1218 aa9.38□□□□□ -0.91
RFX3-202ENST00000358730 SLC20A2Q08357 652 aa9.38□□□□□ -0.91
RFX3-202ENST00000358730 TRADDQ15628 312 aa9.38□□□□□ -0.91
RFX3-202ENST00000358730 RBM26Q5T8P6 1007 aaKnown RBP9.38□□□□□ -0.91
RFX3-202ENST00000358730 TPH2Q8IWU9 490 aa9.38□□□□□ -0.91
RFX3-202ENST00000358730 FAM186BQ8IYM0 893 aa9.38□□□□□ -0.91
RFX3-202ENST00000358730 NLGN1Q8N2Q7 840 aa9.38□□□□□ -0.91
RFX3-202ENST00000358730 MYCT1Q8N699 235 aa9.38□□□□□ -0.91
RFX3-202ENST00000358730 TPCN2Q8NHX9 752 aa9.38□□□□□ -0.91
RFX3-202ENST00000358730 WHAMMQ8TF30 809 aa9.38□□□□□ -0.91
RFX3-202ENST00000358730 PBKQ96KB5 322 aa9.38□□□□□ -0.91
RFX3-202ENST00000358730 FBXL5Q9UKA1 691 aa9.38□□□□□ -0.91
RFX3-202ENST00000358730 PRR12Q9ULL5 1215 aa9.38□□□□□ -0.91
RFX3-202ENST00000358730 IGLV3-22A0A075B6J6 115 aa9.37□□□□□ -0.91
RFX3-202ENST00000358730 ZNF233A6NK53 670 aa9.37□□□□□ -0.91
RFX3-202ENST00000358730 PGRMC1O00264 195 aaKnown RBP9.37□□□□□ -0.91
RFX3-202ENST00000358730 TGFB1I1O43294 461 aa9.37□□□□□ -0.91
RFX3-202ENST00000358730 CFBP00751 764 aa9.37□□□□□ -0.91
RFX3-202ENST00000358730 H2AFZP0C0S5 128 aa9.37□□□□□ -0.91
RFX3-202ENST00000358730 ANXA13P27216 316 aa9.37□□□□□ -0.91
RFX3-202ENST00000358730 HDLBPQ00341 1268 aaKnown RBP9.37□□□□□ -0.91
RFX3-202ENST00000358730 ZC2HC1CQ53FD0 456 aaPredicted RBP9.37□□□□□ -0.91
RFX3-202ENST00000358730 LRCH2Q5VUJ6 765 aa9.37□□□□□ -0.91
RFX3-202ENST00000358730 H2AFVQ71UI9 128 aa9.37□□□□□ -0.91
RFX3-202ENST00000358730 PEX26Q7Z412 305 aa9.37□□□□□ -0.91
RFX3-202ENST00000358730 MREGQ8N565 214 aa9.37□□□□□ -0.91
RFX3-202ENST00000358730 BCAS4Q8TDM0 211 aa9.37□□□□□ -0.91
RFX3-202ENST00000358730 U2AF1L4Q8WU68 220 aaKnown RBP9.37□□□□□ -0.91
RFX3-202ENST00000358730 WDR18Q9BV38 432 aa9.37□□□□□ -0.91
RFX3-202ENST00000358730 AP1M1Q9BXS5 423 aa9.37□□□□□ -0.91
RFX3-202ENST00000358730 TDRD3Q9H7E2 651 aaKnown RBP9.37□□□□□ -0.91
RFX3-202ENST00000358730 TMEM59LQ9UK28 342 aa9.37□□□□□ -0.91
RFX3-202ENST00000358730 NOC2LQ9Y3T9 749 aaKnown RBP9.37□□□□□ -0.91
RFX3-202ENST00000358730 RBBP6Q7Z6E9 1792 aaKnown RBP9.37□□□□□ -0.91
RFX3-202ENST00000358730 ZNF646O15015 1829 aaPredicted RBP9.37□□□□□ -0.91
RFX3-202ENST00000358730 A0A1W2PRG0 241 aa9.37□□□□□ -0.91
RFX3-202ENST00000358730 SHTN1A0MZ66 631 aa9.37□□□□□ -0.91
RFX3-202ENST00000358730 GTPBP10A4D1E9 387 aaKnown RBP9.37□□□□□ -0.91
RFX3-202ENST00000358730 EIF3DO15371 548 aaKnown RBP eCLIP9.37□□□□□ -0.91
RFX3-202ENST00000358730 CYP3A4P08684 503 aa9.37□□□□□ -0.91
RFX3-202ENST00000358730 MMP10P09238 476 aa9.37□□□□□ -0.91
RFX3-202ENST00000358730 POLD1P28340 1107 aa9.37□□□□□ -0.91
RFX3-202ENST00000358730 PSMC2P35998 433 aaKnown RBP9.37□□□□□ -0.91
RFX3-202ENST00000358730 ATP1A2P50993 1020 aa9.37□□□□□ -0.91
RFX3-202ENST00000358730 STAT2P52630 851 aa9.37□□□□□ -0.91
RFX3-202ENST00000358730 PDCLQ13371 301 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms