RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 FAM114A2Q9NRY5 505 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 NAGPAQ9UK23 515 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 DNAJC12Q9UKB3 198 aa7.14□□□□□ -1.27
CSDE1-203ENST00000358528 THRAP3Q9Y2W1 955 aaKnown RBP7.14□□□□□ -1.27
CSDE1-203ENST00000358528 PNMA6FA0A0J9YX94 578 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 SHOX2O60902 331 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-203ENST00000358528 NMT1P30419 496 aaKnown RBP7.13□□□□□ -1.27
CSDE1-203ENST00000358528 ASPRV1Q53RT3 343 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 IQCKQ8N0W5 287 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 NEK9Q8TD19 979 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 ZNF622Q969S3 477 aaKnown RBP eCLIP7.13□□□□□ -1.27
CSDE1-203ENST00000358528 RSRC1Q96IZ7 334 aaKnown RBP7.13□□□□□ -1.27
CSDE1-203ENST00000358528 PURBQ96QR8 312 aaKnown RBP7.13□□□□□ -1.27
CSDE1-203ENST00000358528 SH2D3AQ9BRG2 576 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 IKZF4Q9H2S9 585 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 DDX20Q9UHI6 824 aaKnown RBP7.13□□□□□ -1.27
CSDE1-203ENST00000358528 DBR1Q9UK59 544 aaKnown RBP7.13□□□□□ -1.27
CSDE1-203ENST00000358528 RABGAP1Q9Y3P9 1069 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 DCDC2CA8MYV0 355 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 CAND2O75155 1236 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 GDF11O95390 407 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 TTLL1O95922 423 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 EEF2P13639 858 aaKnown RBP7.13□□□□□ -1.27
CSDE1-203ENST00000358528 CHN1P15882 459 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 KCNJ1P48048 391 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 USP11P51784 963 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 PSMC6P62333 389 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 SKOR1P84550 965 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 DRAP1Q14919 205 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-203ENST00000358528 QPCTQ16769 361 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 KNOP1Q1ED39 458 aaKnown RBP7.13□□□□□ -1.27
CSDE1-203ENST00000358528 CCDC174Q6PII3 467 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 FAM178BQ8IXR5 827 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 UBL4BQ8N7F7 174 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 BANK1Q8NDB2 785 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 MICAL1Q8TDZ2 1067 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 SCFD1Q8WVM8 642 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 CEP63Q96MT8 703 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 NAP1L3Q99457 506 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-203ENST00000358528 MXD3Q9BW11 206 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 ANO3Q9BYT9 981 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 ADAM33Q9BZ11 813 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 GDF3Q9NR23 364 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 BZW2Q9Y6E2 419 aaKnown RBP7.13□□□□□ -1.27
CSDE1-203ENST00000358528 NID2Q14112 1375 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 KCPQ6ZWJ8 1503 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 A0A1B0GUA9 196 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 CCDC169A6NNP5 214 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 OPLAHO14841 1288 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 KRT5P13647 590 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 CASP5P51878 434 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 ZNF844Q08AG5 666 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 MYO1EQ12965 1108 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 ZC2HC1CQ53FD0 456 aaPredicted RBP7.13□□□□□ -1.27
CSDE1-203ENST00000358528 HGSNATQ68CP4 663 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 GSTA5Q7RTV2 222 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 PPM1KQ8N3J5 372 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 DAGLBQ8NCG7 672 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 LINC00116Q8NCU8 138 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 SLC35G2Q8TBE7 412 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 CCDC127Q96BQ5 260 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 HOOK2Q96ED9 719 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 C8orf37Q96NL8 207 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 PRMT1Q99873 361 aaKnown RBP7.13□□□□□ -1.27
CSDE1-203ENST00000358528 REEP2Q9BRK0 252 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 DHX36Q9H2U1 1008 aaKnown RBP7.13□□□□□ -1.27
CSDE1-203ENST00000358528 CD209Q9NNX6 404 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 SERPINB13Q9UIV8 391 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 MTUS1Q9ULD2 1270 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 CEP83Q9Y592 693 aa7.13□□□□□ -1.27
CSDE1-203ENST00000358528 MYH7P12883 1935 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 CCDC188H7C350 402 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 EVI5O60447 810 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 FERP16591 822 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 BIRC3Q13489 604 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 ODR4Q5SWX8 454 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 SLFN13Q68D06 897 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 TRIM68Q6AZZ1 485 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 TAB3Q8N5C8 712 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-203ENST00000358528 TPCN2Q8NHX9 752 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 CHMP6Q96FZ7 201 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 ACTR5Q9H9F9 607 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-203ENST00000358528 UBE2TQ9NPD8 197 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-203ENST00000358528 ZC3H4Q9UPT8 1303 aaKnown RBP7.12□□□□□ -1.27
CSDE1-203ENST00000358528 BCL9O00512 1426 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 ATMINO43313 823 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-203ENST00000358528 MED24O75448 989 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 CYP11B2P19099 503 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 FXR2P51116 673 aaKnown RBP eCLIP7.12□□□□□ -1.275e-7■□□□□ 10.4
CSDE1-203ENST00000358528 PMS2P54278 862 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 KCNA1Q09470 495 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 TRAPPC3LQ5T215 181 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 NUGGCQ68CJ6 796 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 AADACL2Q6P093 401 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 CYB5D1Q6P9G0 228 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 KCNV1Q6PIU1 500 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 CLEC4GQ6UXB4 293 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 KIAA0825Q8IV33 1275 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 INPP4AQ96PE3 977 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-203ENST00000358528 LBHD1Q9BQE6 289 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms