RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 NUDT17P0C025 328 aa25.8■■□□□ 1.72
NPAS3-203ENST00000357798 AMFRQ9UKV5 643 aa25.8■■□□□ 1.72
NPAS3-203ENST00000357798 TRAF3IP3Q9Y228 551 aa25.8■■□□□ 1.72
NPAS3-203ENST00000357798 MARCH6O60337 910 aa25.79■■□□□ 1.72
NPAS3-203ENST00000357798 CLK2P49760 499 aaKnown RBP25.79■■□□□ 1.72
NPAS3-203ENST00000357798 JAM2P57087 298 aa25.79■■□□□ 1.72
NPAS3-203ENST00000357798 NLRP3Q96P20 1036 aa25.79■■□□□ 1.72
NPAS3-203ENST00000357798 ZNF317Q96PQ6 595 aaPredicted RBP25.79■■□□□ 1.72
NPAS3-203ENST00000357798 KIAA1024Q9UPX6 916 aa25.79■■□□□ 1.72
NPAS3-203ENST00000357798 ASAP2O43150 1006 aa25.79■■□□□ 1.72
NPAS3-203ENST00000357798 MSL1Q68DK7 614 aa25.79■■□□□ 1.72
NPAS3-203ENST00000357798 ATP8A1Q9Y2Q0 1164 aa25.79■■□□□ 1.72
NPAS3-203ENST00000357798 NPHP3-ACAD11A0A0J9YXS1 232 aa25.78■■□□□ 1.72
NPAS3-203ENST00000357798 CTNND1O60716 968 aaKnown RBP25.78■■□□□ 1.72
NPAS3-203ENST00000357798 GFPT2O94808 682 aa25.78■■□□□ 1.72
NPAS3-203ENST00000357798 PTENP60484 403 aa25.78■■□□□ 1.72
NPAS3-203ENST00000357798 ITIH4Q14624 930 aa25.78■■□□□ 1.72
NPAS3-203ENST00000357798 EPHA7Q15375 998 aa25.78■■□□□ 1.72
NPAS3-203ENST00000357798 DNAAF5Q86Y56 855 aa25.78■■□□□ 1.72
NPAS3-203ENST00000357798 ANKS4BQ8N8V4 417 aa25.78■■□□□ 1.72
NPAS3-203ENST00000357798 RTFDC1Q9BY42 306 aaPredicted RBP25.78■■□□□ 1.72
NPAS3-203ENST00000357798 LRRC4CQ9HCJ2 640 aa25.78■■□□□ 1.72
NPAS3-203ENST00000357798 CAND2O75155 1236 aa25.78■■□□□ 1.72
NPAS3-203ENST00000357798 ELF3P78545 371 aaPredicted RBP25.78■■□□□ 1.72
NPAS3-203ENST00000357798 MDM1Q8TC05 714 aa25.78■■□□□ 1.72
NPAS3-203ENST00000357798 PGM2Q96G03 612 aa25.78■■□□□ 1.72
NPAS3-203ENST00000357798 NAP1L4Q99733 375 aaKnown RBP25.78■■□□□ 1.72
NPAS3-203ENST00000357798 TRIM51Q9BSJ1 452 aa25.78■■□□□ 1.72
NPAS3-203ENST00000357798 PNMA2Q9UL42 364 aa25.78■■□□□ 1.72
NPAS3-203ENST00000357798 FRMPD2Q68DX3 1309 aaPredicted RBP25.78■■□□□ 1.72
NPAS3-203ENST00000357798 NCANO14594 1321 aa25.78■■□□□ 1.72
NPAS3-203ENST00000357798 RGL2O15211 777 aa25.78■■□□□ 1.72
NPAS3-203ENST00000357798 ATP2C2O75185 946 aa25.78■■□□□ 1.72
NPAS3-203ENST00000357798 DDX3XO00571 662 aaKnown RBP eCLIP25.77■■□□□ 1.72
NPAS3-203ENST00000357798 CACNB1Q02641 598 aaPredicted RBP25.77■■□□□ 1.72
NPAS3-203ENST00000357798 MIEF2Q96C03 454 aa25.77■■□□□ 1.72
NPAS3-203ENST00000357798 NYXQ9GZU5 481 aa25.77■■□□□ 1.72
NPAS3-203ENST00000357798 SIX2Q9NPC8 291 aa25.77■■□□□ 1.72
NPAS3-203ENST00000357798 OPLAHO14841 1288 aa25.77■■□□□ 1.72
NPAS3-203ENST00000357798 XRCC5P13010 732 aaKnown RBP25.77■■□□□ 1.72
NPAS3-203ENST00000357798 MMP13P45452 471 aa25.77■■□□□ 1.72
NPAS3-203ENST00000357798 UBE2SQ16763 222 aa25.77■■□□□ 1.72
NPAS3-203ENST00000357798 DUPD1Q68J44 220 aa25.77■■□□□ 1.72
NPAS3-203ENST00000357798 ZDHHC18Q9NUE0 388 aa25.77■■□□□ 1.72
NPAS3-203ENST00000357798 FAM187AA6NFU0 413 aa25.76■■□□□ 1.71
NPAS3-203ENST00000357798 FGGP02679 453 aa25.76■■□□□ 1.71
NPAS3-203ENST00000357798 FERP16591 822 aa25.76■■□□□ 1.71
NPAS3-203ENST00000357798 GRIK5Q16478 980 aa25.76■■□□□ 1.71
NPAS3-203ENST00000357798 TLDC1Q6P9B6 456 aa25.76■■□□□ 1.71
NPAS3-203ENST00000357798 ACSBG1Q96GR2 724 aa25.76■■□□□ 1.71
NPAS3-203ENST00000357798 MXD3Q9BW11 206 aa25.76■■□□□ 1.71
NPAS3-203ENST00000357798 EPB41L4BQ9H329 900 aa25.76■■□□□ 1.71
NPAS3-203ENST00000357798 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.76■■□□□ 1.71
NPAS3-203ENST00000357798 ATP6V1G2O95670 118 aa25.76■■□□□ 1.71
NPAS3-203ENST00000357798 KRT18P05783 430 aaKnown RBP25.76■■□□□ 1.71
NPAS3-203ENST00000357798 CHN1P15882 459 aa25.76■■□□□ 1.71
NPAS3-203ENST00000357798 BICDL1Q6ZP65 573 aa25.76■■□□□ 1.71
NPAS3-203ENST00000357798 PIGWQ7Z7B1 504 aa25.76■■□□□ 1.71
NPAS3-203ENST00000357798 U2AF1L4Q8WU68 220 aaKnown RBP25.76■■□□□ 1.71
NPAS3-203ENST00000357798 ATXN2LQ8WWM7 1075 aaKnown RBP25.76■■□□□ 1.71
NPAS3-203ENST00000357798 NAP1L3Q99457 506 aaPredicted RBP25.76■■□□□ 1.71
NPAS3-203ENST00000357798 SLC12A4Q9UP95 1085 aa25.76■■□□□ 1.71
NPAS3-203ENST00000357798 EPB41L3Q9Y2J2 1087 aaPredicted RBP25.76■■□□□ 1.71
NPAS3-203ENST00000357798 PLIN4Q96Q06 1357 aa25.75■■□□□ 1.71
NPAS3-203ENST00000357798 POTEB3A0JP26 581 aa25.75■■□□□ 1.71
NPAS3-203ENST00000357798 POTECB2RU33 542 aa25.75■■□□□ 1.71
NPAS3-203ENST00000357798 MMEP08473 750 aa25.75■■□□□ 1.71
NPAS3-203ENST00000357798 POTEBQ6S5H4 581 aa25.75■■□□□ 1.71
NPAS3-203ENST00000357798 NEK9Q8TD19 979 aa25.75■■□□□ 1.71
NPAS3-203ENST00000357798 ERP44Q9BS26 406 aa25.75■■□□□ 1.71
NPAS3-203ENST00000357798 PABPC3Q9H361 631 aaKnown RBP25.75■■□□□ 1.71
NPAS3-203ENST00000357798 METTL14Q9HCE5 456 aaKnown RBP25.75■■□□□ 1.71
NPAS3-203ENST00000357798 PNMA6FA0A0J9YX94 578 aa25.75■■□□□ 1.71
NPAS3-203ENST00000357798 CALUO43852 315 aaPredicted RBP25.75■■□□□ 1.71
NPAS3-203ENST00000357798 SLC12A3P55017 1021 aa25.75■■□□□ 1.71
NPAS3-203ENST00000357798 DR1Q01658 176 aa25.75■■□□□ 1.71
NPAS3-203ENST00000357798 KNOP1Q1ED39 458 aaKnown RBP25.75■■□□□ 1.71
NPAS3-203ENST00000357798 CUL5Q93034 780 aa25.75■■□□□ 1.71
NPAS3-203ENST00000357798 GJA10Q969M2 543 aa25.75■■□□□ 1.71
NPAS3-203ENST00000357798 AJAP1Q9UKB5 411 aaPredicted RBP25.75■■□□□ 1.71
NPAS3-203ENST00000357798 CCDC169A6NNP5 214 aa25.74■■□□□ 1.71
NPAS3-203ENST00000357798 DDX3YO15523 660 aaKnown RBP25.74■■□□□ 1.71
NPAS3-203ENST00000357798 SNHG28P0DPA3 235 aa25.74■■□□□ 1.71
NPAS3-203ENST00000357798 BTDP43251 543 aa25.74■■□□□ 1.71
NPAS3-203ENST00000357798 GALCP54803 685 aa25.74■■□□□ 1.71
NPAS3-203ENST00000357798 ARSHQ5FYA8 562 aa25.74■■□□□ 1.71
NPAS3-203ENST00000357798 TBC1D9BQ66K14 1250 aa25.74■■□□□ 1.71
NPAS3-203ENST00000357798 DHX36Q9H2U1 1008 aaKnown RBP25.74■■□□□ 1.71
NPAS3-203ENST00000357798 NOD2Q9HC29 1040 aa25.74■■□□□ 1.71
NPAS3-203ENST00000357798 DAAM1Q9Y4D1 1078 aa25.74■■□□□ 1.71
NPAS3-203ENST00000357798 COL24A1Q17RW2 1714 aa25.74■■□□□ 1.71
NPAS3-203ENST00000357798 PDXKO00764 312 aa25.74■■□□□ 1.71
NPAS3-203ENST00000357798 PMS2P54278 862 aa25.74■■□□□ 1.71
NPAS3-203ENST00000357798 CRYMQ14894 314 aa25.74■■□□□ 1.71
NPAS3-203ENST00000357798 CLUL1Q15846 466 aa25.74■■□□□ 1.71
NPAS3-203ENST00000357798 CROCCP2Q86T23 111 aa25.74■■□□□ 1.71
NPAS3-203ENST00000357798 TEX11Q8IYF3 940 aa25.74■■□□□ 1.71
NPAS3-203ENST00000357798 CARD9Q9H257 536 aa25.74■■□□□ 1.71
NPAS3-203ENST00000357798 CCDC134Q9H6E4 229 aa25.74■■□□□ 1.71
NPAS3-203ENST00000357798 GOLGA6L10A0A0M3HER8 536 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms