RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 A0A1W2PQJ5 194 aa13.94□□□□□ -0.18
RTFDC1-202ENST00000357348 TMEM88BA6NKF7 163 aa13.94□□□□□ -0.18
RTFDC1-202ENST00000357348 ATP2A1O14983 1001 aa13.94□□□□□ -0.18
RTFDC1-202ENST00000357348 RHOBTB3O94955 611 aa13.94□□□□□ -0.18
RTFDC1-202ENST00000357348 MYCLP12524 364 aaPredicted RBP13.94□□□□□ -0.18
RTFDC1-202ENST00000357348 GUCY2CP25092 1073 aa13.94□□□□□ -0.18
RTFDC1-202ENST00000357348 PMS1P54277 932 aaKnown RBP13.94□□□□□ -0.18
RTFDC1-202ENST00000357348 PPFIA1Q13136 1202 aa13.94□□□□□ -0.18
RTFDC1-202ENST00000357348 TSR1Q2NL82 804 aaKnown RBP13.94□□□□□ -0.18
RTFDC1-202ENST00000357348 CYP4F22Q6NT55 531 aa13.94□□□□□ -0.18
RTFDC1-202ENST00000357348 TTI2Q6NXR4 508 aa13.94□□□□□ -0.18
RTFDC1-202ENST00000357348 GBP6Q6ZN66 633 aa13.94□□□□□ -0.18
RTFDC1-202ENST00000357348 RIN2Q8WYP3 895 aaPredicted RBP13.94□□□□□ -0.18
RTFDC1-202ENST00000357348 RMDN3Q96TC7 470 aa13.94□□□□□ -0.18
RTFDC1-202ENST00000357348 PNMA3Q9UL41 463 aa13.94□□□□□ -0.18
RTFDC1-202ENST00000357348 TLL2Q9Y6L7 1015 aa13.94□□□□□ -0.18
RTFDC1-202ENST00000357348 EPB41P11171 864 aaKnown RBP13.94□□□□□ -0.18
RTFDC1-202ENST00000357348 IRAK1P51617 712 aa13.94□□□□□ -0.18
RTFDC1-202ENST00000357348 ZBED6P86452 979 aa13.94□□□□□ -0.18
RTFDC1-202ENST00000357348 NAALADL2Q58DX5 795 aa13.94□□□□□ -0.18
RTFDC1-202ENST00000357348 PPP4R3AQ6IN85 833 aa13.94□□□□□ -0.18
RTFDC1-202ENST00000357348 GIMAP8Q8ND71 665 aaPredicted RBP13.94□□□□□ -0.18
RTFDC1-202ENST00000357348 CRYGNQ8WXF5 182 aa13.94□□□□□ -0.18
RTFDC1-202ENST00000357348 PLIN2Q99541 437 aa13.94□□□□□ -0.18
RTFDC1-202ENST00000357348 CYP39A1Q9NYL5 469 aa13.94□□□□□ -0.18
RTFDC1-202ENST00000357348 PKD2L1Q9P0L9 805 aa13.94□□□□□ -0.18
RTFDC1-202ENST00000357348 TRIM49BA6NDI0 452 aa13.93□□□□□ -0.18
RTFDC1-202ENST00000357348 IGF2BP3O00425 579 aaKnown RBP eCLIP13.93□□□□□ -0.18
RTFDC1-202ENST00000357348 HNRNPH3P31942 346 aaKnown RBP13.93□□□□□ -0.18
RTFDC1-202ENST00000357348 USP11P51784 963 aa13.93□□□□□ -0.18
RTFDC1-202ENST00000357348 VAV2P52735 878 aa13.93□□□□□ -0.18
RTFDC1-202ENST00000357348 CNTN2Q02246 1040 aa13.93□□□□□ -0.18
RTFDC1-202ENST00000357348 ARHGEF16Q5VV41 709 aa13.93□□□□□ -0.18
RTFDC1-202ENST00000357348 CREG2Q8IUH2 290 aa13.93□□□□□ -0.18
RTFDC1-202ENST00000357348 ZBTB9Q96C00 473 aa13.93□□□□□ -0.18
RTFDC1-202ENST00000357348 TSGA10Q9BZW7 698 aa13.93□□□□□ -0.18
RTFDC1-202ENST00000357348 PORCNQ9H237 461 aa13.93□□□□□ -0.18
RTFDC1-202ENST00000357348 NHEJ1Q9H9Q4 299 aaPredicted RBP13.93□□□□□ -0.18
RTFDC1-202ENST00000357348 DISC1Q9NRI5 854 aa13.93□□□□□ -0.18
RTFDC1-202ENST00000357348 TFR2Q9UP52 801 aa13.93□□□□□ -0.18
RTFDC1-202ENST00000357348 ZNFX1Q9P2E3 1918 aaKnown RBP13.93□□□□□ -0.18
RTFDC1-202ENST00000357348 GOLGA6BA6NDN3 693 aa13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 POTEMA6NI47 508 aa13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 GOLGA8KD6RF30 607 aa13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 TNFRSF8P28908 595 aa13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 ERVK-9P63128 1117 aa13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 KIAA1328Q86T90 577 aa13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 RIOX2Q8IUF8 465 aa13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 HAS1Q92839 578 aa13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 IQCDQ96DY2 449 aa13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 DHTKD1Q96HY7 919 aaPredicted RBP13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 DUSP9Q99956 384 aaKnown RBP13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 EXOC1Q9NV70 894 aa13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 SNX12Q9UMY4 172 aa13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 GRIN2DO15399 1336 aa13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 LCTP09848 1927 aa13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 GOLGA6CA6NDK9 693 aa13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 CLSTN1O94985 981 aa13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 PGK2P07205 417 aa13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 GOLGA6DP0CG33 693 aa13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 STAT6P42226 847 aa13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 GTF2A1P52655 376 aaPredicted RBP13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 SKOR1P84550 965 aa13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 ANKRD23Q86SG2 305 aa13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 RASSF8Q8NHQ8 419 aa13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 CAPZA3Q96KX2 299 aa13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 MTMR9Q96QG7 549 aa13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 ERGIC2Q96RQ1 377 aa13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 AGPAT5Q9NUQ2 364 aa13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 KBTBD4Q9NVX7 518 aa13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 RNF216Q9NWF9 866 aaPredicted RBP13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 GOLGA6AQ9NYA3 693 aa13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 PNMA2Q9UL42 364 aa13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 RABGAP1Q9Y3P9 1069 aa13.92□□□□□ -0.18
RTFDC1-202ENST00000357348 A6NNZ2 444 aa13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 FAM155AB1AL88 458 aaPredicted RBP13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 ZNF185O15231 689 aa13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 SLC10A3P09131 477 aa13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 HTRA3P83110 453 aa13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 PGM5Q15124 567 aa13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 TUBB8Q3ZCM7 444 aa13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 SWT1Q5T5J6 900 aaKnown RBP13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 MCTP2Q6DN12 878 aa13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 LENG9Q96B70 501 aa13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 WDR11Q9BZH6 1224 aa13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 CCSER1Q9C0I3 900 aa13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 PLEKHA4Q9H4M7 779 aa13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 PXMP2Q9NR77 195 aa13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 ZNHIT6Q9NWK9 470 aaKnown RBP13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 CPA4Q9UI42 421 aa13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 MAPK8IP1Q9UQF2 711 aa13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 ATXN2Q99700 1313 aaKnown RBP13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 CEP350Q5VT06 3117 aa13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 PSMA7O14818 248 aa13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 EIF3HO15372 352 aaKnown RBP eCLIP13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 ZMYND10O75800 440 aa13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 LCA5LO95447 670 aa13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 FSTL1Q12841 308 aa13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 MMS22LQ6ZRQ5 1243 aa13.91□□□□□ -0.18
RTFDC1-202ENST00000357348 PLCD3Q8N3E9 789 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms