RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 BAG3O95817 575 aa11.04□□□□□ -0.64
PTPRA-203ENST00000356147 VIMP08670 466 aaKnown RBP11.04□□□□□ -0.64
PTPRA-203ENST00000356147 H2AFZP0C0S5 128 aa11.04□□□□□ -0.64
PTPRA-203ENST00000356147 KRT13P13646 458 aa11.04□□□□□ -0.64
PTPRA-203ENST00000356147 CYP11B2P19099 503 aa11.04□□□□□ -0.64
PTPRA-203ENST00000356147 PAX7P23759 505 aa11.04□□□□□ -0.64
PTPRA-203ENST00000356147 GALCP54803 685 aa11.04□□□□□ -0.64
PTPRA-203ENST00000356147 ARSHQ5FYA8 562 aa11.04□□□□□ -0.64
PTPRA-203ENST00000356147 MSL1Q68DK7 614 aa11.04□□□□□ -0.64
PTPRA-203ENST00000356147 LRIG3Q6UXM1 1119 aa11.04□□□□□ -0.64
PTPRA-203ENST00000356147 H2AFVQ71UI9 128 aa11.04□□□□□ -0.64
PTPRA-203ENST00000356147 PTF1AQ7RTS3 328 aa11.04□□□□□ -0.64
PTPRA-203ENST00000356147 THOC1Q96FV9 657 aaKnown RBP11.04□□□□□ -0.64
PTPRA-203ENST00000356147 AZI2Q9H6S1 392 aa11.04□□□□□ -0.64
PTPRA-203ENST00000356147 SLC24A3Q9HC58 644 aa11.04□□□□□ -0.64
PTPRA-203ENST00000356147 UTP11Q9Y3A2 253 aaKnown RBP11.04□□□□□ -0.64
PTPRA-203ENST00000356147 ABCB11O95342 1321 aa11.04□□□□□ -0.64
PTPRA-203ENST00000356147 MMEP08473 750 aa11.03□□□□□ -0.64
PTPRA-203ENST00000356147 OTUD6AQ7L8S5 288 aa11.03□□□□□ -0.64
PTPRA-203ENST00000356147 TAX1BP1Q86VP1 789 aa11.03□□□□□ -0.64
PTPRA-203ENST00000356147 SFR1Q86XK3 245 aa11.03□□□□□ -0.64
PTPRA-203ENST00000356147 LRRC34Q8IZ02 419 aa11.03□□□□□ -0.64
PTPRA-203ENST00000356147 ACTRT1Q8TDG2 376 aa11.03□□□□□ -0.64
PTPRA-203ENST00000356147 SYN2Q92777 582 aaPredicted RBP11.03□□□□□ -0.64
PTPRA-203ENST00000356147 PBKQ96KB5 322 aa11.03□□□□□ -0.64
PTPRA-203ENST00000356147 XPO6Q96QU8 1125 aaKnown RBP11.03□□□□□ -0.64
PTPRA-203ENST00000356147 GCNT4Q9P109 453 aa11.03□□□□□ -0.64
PTPRA-203ENST00000356147 PCDHA2Q9Y5H9 948 aa11.03□□□□□ -0.64
PTPRA-203ENST00000356147 FGFR4P22455 802 aa11.03□□□□□ -0.64
PTPRA-203ENST00000356147 CLNS1AP54105 237 aaKnown RBP11.03□□□□□ -0.64
PTPRA-203ENST00000356147 ADCY1Q08828 1119 aa11.03□□□□□ -0.64
PTPRA-203ENST00000356147 PSMD2Q13200 908 aa11.03□□□□□ -0.64
PTPRA-203ENST00000356147 DCAF12L1Q5VU92 463 aa11.03□□□□□ -0.64
PTPRA-203ENST00000356147 NT5DC3Q86UY8 548 aa11.03□□□□□ -0.64
PTPRA-203ENST00000356147 CCDC25Q86WR0 208 aa11.03□□□□□ -0.64
PTPRA-203ENST00000356147 PALB2Q86YC2 1186 aa11.03□□□□□ -0.64
PTPRA-203ENST00000356147 BANK1Q8NDB2 785 aa11.03□□□□□ -0.64
PTPRA-203ENST00000356147 FBXO25Q8TCJ0 367 aa11.03□□□□□ -0.64
PTPRA-203ENST00000356147 ATP8B4Q8TF62 1192 aa11.03□□□□□ -0.64
PTPRA-203ENST00000356147 CCT6BQ92526 530 aa11.03□□□□□ -0.64
PTPRA-203ENST00000356147 STAMBPL1Q96FJ0 436 aa11.03□□□□□ -0.64
PTPRA-203ENST00000356147 PRMT1Q99873 361 aaKnown RBP11.03□□□□□ -0.64
PTPRA-203ENST00000356147 LZTS2Q9BRK4 669 aa11.03□□□□□ -0.64
PTPRA-203ENST00000356147 VEZTQ9HBM0 779 aa11.03□□□□□ -0.64
PTPRA-203ENST00000356147 TAS2R14Q9NYV8 317 aa11.03□□□□□ -0.64
PTPRA-203ENST00000356147 DBR1Q9UK59 544 aaKnown RBP11.03□□□□□ -0.64
PTPRA-203ENST00000356147 CEP83Q9Y592 693 aa11.03□□□□□ -0.64
PTPRA-203ENST00000356147 SNED1Q8TER0 1413 aa11.02□□□□□ -0.64
PTPRA-203ENST00000356147 USP17L10C9JJH3 530 aa11.02□□□□□ -0.64
PTPRA-203ENST00000356147 MYCNP04198 464 aaPredicted RBP11.02□□□□□ -0.64
PTPRA-203ENST00000356147 XRCC5P13010 732 aaKnown RBP11.02□□□□□ -0.64
PTPRA-203ENST00000356147 AKR1B1P15121 316 aa11.02□□□□□ -0.64
PTPRA-203ENST00000356147 POLD1P28340 1107 aa11.02□□□□□ -0.64
PTPRA-203ENST00000356147 HOXD13P35453 343 aa11.02□□□□□ -0.64
PTPRA-203ENST00000356147 BIRC3Q13489 604 aa11.02□□□□□ -0.64
PTPRA-203ENST00000356147 SLC29A2Q14542 456 aa11.02□□□□□ -0.64
PTPRA-203ENST00000356147 NAA25Q14CX7 972 aa11.02□□□□□ -0.64
PTPRA-203ENST00000356147 DDB1Q16531 1140 aa11.02□□□□□ -0.64
PTPRA-203ENST00000356147 DPP8Q6V1X1 898 aaPredicted RBP11.02□□□□□ -0.64
PTPRA-203ENST00000356147 LINC00116Q8NCU8 138 aa11.02□□□□□ -0.64
PTPRA-203ENST00000356147 NEDD1Q8NHV4 660 aa11.02□□□□□ -0.64
PTPRA-203ENST00000356147 EPS8L3Q8TE67 593 aaKnown RBP11.02□□□□□ -0.64
PTPRA-203ENST00000356147 ARHGEF26Q96DR7 871 aa11.02□□□□□ -0.64
PTPRA-203ENST00000356147 CHMP6Q96FZ7 201 aa11.02□□□□□ -0.64
PTPRA-203ENST00000356147 KIAA1551Q9HCM1 1747 aa11.02□□□□□ -0.64
PTPRA-203ENST00000356147 LRRN2O75325 713 aa11.02□□□□□ -0.65
PTPRA-203ENST00000356147 TRIM37O94972 964 aa11.02□□□□□ -0.65
PTPRA-203ENST00000356147 AFPP02771 609 aaKnown RBP11.02□□□□□ -0.65
PTPRA-203ENST00000356147 ZBTB48P10074 688 aaPredicted RBP11.02□□□□□ -0.65
PTPRA-203ENST00000356147 MARCKSL1P49006 195 aa11.02□□□□□ -0.65
PTPRA-203ENST00000356147 PSEN1P49768 467 aa11.02□□□□□ -0.65
PTPRA-203ENST00000356147 PDIA5Q14554 519 aa11.02□□□□□ -0.65
PTPRA-203ENST00000356147 ARHGAP44Q17R89 818 aa11.02□□□□□ -0.65
PTPRA-203ENST00000356147 ADGRF4Q8IZF3 695 aa11.02□□□□□ -0.65
PTPRA-203ENST00000356147 CCDC26Q8TAB7 109 aa11.02□□□□□ -0.65
PTPRA-203ENST00000356147 LNX1Q8TBB1 728 aaPredicted RBP11.02□□□□□ -0.65
PTPRA-203ENST00000356147 RNF25Q96BH1 459 aaPredicted RBP11.02□□□□□ -0.65
PTPRA-203ENST00000356147 CEP63Q96MT8 703 aa11.02□□□□□ -0.65
PTPRA-203ENST00000356147 ACTR5Q9H9F9 607 aaPredicted RBP11.02□□□□□ -0.65
PTPRA-203ENST00000356147 ABCF3Q9NUQ8 709 aa11.02□□□□□ -0.65
PTPRA-203ENST00000356147 DNAJC17Q9NVM6 304 aaKnown RBP11.02□□□□□ -0.65
PTPRA-203ENST00000356147 DONSONQ9NYP3 566 aa11.02□□□□□ -0.65
PTPRA-203ENST00000356147 FLOT1O75955 427 aa11.02□□□□□ -0.65
PTPRA-203ENST00000356147 GBP2P32456 591 aaPredicted RBP11.02□□□□□ -0.65
PTPRA-203ENST00000356147 MYO1EQ12965 1108 aa11.02□□□□□ -0.65
PTPRA-203ENST00000356147 SHROOM1Q2M3G4 852 aaPredicted RBP11.02□□□□□ -0.65
PTPRA-203ENST00000356147 CPNE8Q86YQ8 564 aa11.02□□□□□ -0.65
PTPRA-203ENST00000356147 KIF2BQ8N4N8 673 aa11.02□□□□□ -0.65
PTPRA-203ENST00000356147 RDH13Q8NBN7 331 aa11.02□□□□□ -0.65
PTPRA-203ENST00000356147 CCDC197Q8NCU1 140 aa11.02□□□□□ -0.65
PTPRA-203ENST00000356147 SLC35G2Q8TBE7 412 aa11.02□□□□□ -0.65
PTPRA-203ENST00000356147 C18orf8Q96DM3 657 aa11.02□□□□□ -0.65
PTPRA-203ENST00000356147 RTFDC1Q9BY42 306 aaPredicted RBP11.02□□□□□ -0.65
PTPRA-203ENST00000356147 SEMA4AQ9H3S1 761 aa11.02□□□□□ -0.65
PTPRA-203ENST00000356147 JMJD4Q9H9V9 463 aa11.02□□□□□ -0.65
PTPRA-203ENST00000356147 PTPN22Q9Y2R2 807 aa11.02□□□□□ -0.65
PTPRA-203ENST00000356147 MPHOSPH10O00566 681 aaKnown RBP11.01□□□□□ -0.65
PTPRA-203ENST00000356147 EVI5O60447 810 aa11.01□□□□□ -0.65
PTPRA-203ENST00000356147 CREB1P16220 341 aa11.01□□□□□ -0.65
PTPRA-203ENST00000356147 ELF3P78545 371 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms